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J

Jonas C. Schupp

yale university

35H-index
238Paper Count
7.4KCitation Count
Published Papers 72
Publication Date
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Transcriptional landscape of pulmonary artery endothelium reveals subpopulation- and disease-specific remodeling signatures
errCommunications Biology
IF5.1
err2026-05-11
err0
errOAAI
errThomas Lins; Francesco Valzano; Elisabeth Fließer; Izabela Borek; Slaven Crnkovic; Mike Morley; Maria C. Basil; Jeremy Katzen; Edward Cantu; Jonas C. Schupp; Nikolaus Kneidinger; Jörg Lindenmann; Clemens Aigner; Alberto Benazzo; Edward E. Morrisey; Marek Bartkuhn; Leigh M. Marsh; Anna Birnhuber; Grazyna Kwapiszewska
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The pleuroparenchymal fibroelastosis atlas reveals aberrant cell states and their zonation as an alternate roadmap to lung fibrosis
errScience Advances
IF12.5
err2026-05-08
err0
errOAAI
errJannik Ruwisch; Aurélie Cazes; Lena M. Leiber; Raphaël Borie; Lavinia Neubert; Leonard Christian; Vincent Thomas de Montpréville; Adam Szmul; Farah Moussa; Stijn E. Verleden; Svenja Gaedcke; Jan Hegermann; Jan Fuge; Matthias Ballmaier; Jan C. Kamp; Mark Greer; Peter Braubach; Christopher Werlein; Fabius Ius; Theresa Graalmann; Kalil Aburahma; Laurens J. De Sadeleer; Ryoko Egashira; Maximilian Ackermann; Daisuke Yamada; Marius M. Hoeper; Christine Falk; Jens Gottlieb; Herbert B. Schiller; Bart Vanaudenaerde; Benjamin Seeliger; Marie-Pierre Debray; Jean Francois Bernaudin; Lars Knudsen; Emmanuel Bergot; Joseph Jacob; Hervé Mal; Danny Jonigk; Sabine Dettmer; Pierre Mordant; Antje Prasse; Elie Fadel; Wim A. Wuyts; Bruno Crestani; Naftali Kaminski; Aurélien Justet; Jonas C. Schupp
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PDE-4 Inhibition in Sarcoidosis Patients: A Retrospective Single-Center Analysis of 51 Patients
errPharmaceuticals 2025, Vol. 18, Page 1729
IF4.8
err2025-11-18
err0
errOAAI
errMartin Elias Feineis; Charlott Terschluse; Louis Jouanjan; Daniel Soriano; Prerana Agarwal; Jonas Schupp; Joachim Müller-Quernheim; Daiana Stolz; Björn Christian Frye
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SegDecon bridges histology and transcriptomics through AI-based nuclei segmentation and image-informed spatial deconvolution
errComputational and Structural Biotechnology Journal
IF4.1
err2025-10-24
err0
errOAAI
errYuesi Xi; Xun Jiang; Jonas C. Schupp; Cheng-Jian Xu; Yang Li
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Differential effects of antifibrotic treatment on outcome prediction via serial CRPM levels in IPF
errCHEST
IF8.6
err2025-09-29
err0
errOAAI
errBenjamin Seeliger; Jannik Ruwisch; Jannie Marie Bülow Sand; Filipa B. Simões; Henrik Jessen; Eda Boerner; Jan Fuge; Katherina Sewald; Tobias Welte; Pedro David Wendel-Garcia; Jonas C. Schupp; Diana Julie Leeming; Francesco Bonella; Antje Prasse
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A deep generative model for deciphering cellular dynamics and in silico drug discovery in complex diseases
errNature Biomedical Engineering
IF26.6
err2025-06-20
err0
errOAAI
errYumin Zheng; Jonas C. Schupp; Taylor Adams; Geremy Clair; Aurelien Justet; Farida Ahangari; Xiting Yan; Paul Hansen; Marianne Carlon; Emanuela Cortesi; Marie Vermant; Robin Vos; Laurens J. De Sadeleer; Ivan O. Rosas; Ricardo Pineda; John Sembrat; Melanie Königshoff; John E. McDonough; Bart M. Vanaudenaerde; Wim A. Wuyts; Naftali Kaminski; Jun Ding
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T cells of patients with systemic sclerosis or Sjögren's disease display an aberrant metabolic state and memory phenotype in blood and lungs
errRHEUMATOLOGY
IF4.4
err2025-04-17
err0
PREAI
errEhlers, Christine; Biermann, Hannah; Thiele, Thea; Schupp, Jonas C.; Villa, Matteo; Jaenke, Christine; Risser, Linus M.; Witte, Torsten; Kalinke, Ulrich; Seeliger, Benjamin; Graalmann, Theresa
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Dissecting the immune cell niche in pulmonary sarcoidosis-CXCL10+monocyte-derived macrophages are potential drivers of TH17.1 inflammation
errEUROPEAN RESPIRATORY JOURNAL
IF21
err2024-10-30
err0
PREAI
errRuwisch, Jannik; Schupp, Jonas C.; Bartkute, Brigita; Artysh, Nataliia; Kaminski, Naftali; Prasse, Antje
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129Xe magnetic resonance imaging for monitoring lung function and microstructure in patients on treatment for progressive fibrosing interstitial lung disease
errEUROPEAN RESPIRATORY JOURNAL
IF21
err2024-10-30
err0
errOAAI
errKern, Agilo Luitger; Voskrebenzev, Andreas; Klimes, Filip; Pink, Isabell; Schupp, Jonas C.; Seeliger, Benjamin; Konietzke, Marilisa; Peter, Daniel; Risse, Frank; Welte, Tobias; Wacker, Frank; Hohlfeld, Jens M.; Shin, Hoen-Oh; Prasse, Antje; Vogel-Claussen, Jens
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Novel insight into alveolar capillary dysplasia from multi-omics and 3D imaging
errEUROPEAN RESPIRATORY JOURNAL
IF21
err2024-10-30
err0
PREAI
errPark, Da-Hee; Kamp, Jan-Christopher; Neubert, Lavinia; Freitag, Hinrich; Schupp, Jonas C.; Braubach, Peter; Christoph, Wrede; Florian, Laenger; Saldit, Tim; Reichmann, Jakob; Welte, Tobias; Ruhparwar, Arjang; Ius, Pabio; Schwerk, Nicolaus; Bergmann, Anke K.; Von Hardenberg, Sandra; Griese, Matthias; Rapp, Christina; Olsson, Karen M.; Fuge, Jan; Hoeper, Marius M.; Jonigk, Danny D.; Knudsen, Lars; Kuehnel, Mark P.
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errSave
Single-nuclei RNA-seq reveals aberrant cell populations in restrictive allograft syndrome after lung transplantation
errEUROPEAN RESPIRATORY JOURNAL
IF21
err2024-10-30
err0
PREAI
errLeiber, Lena Maureen; Christian, Leonard; Neubert, Lavinia; Yilmaz, Hande; Kamp, Jan-Christopher; Plucinski, Edith Katharina; Welte, Tobias; Falk, Christine; Kaminski, Naftali; Jonigk, Danny; Gottlieb, Jens; Schupp, Jonas Christian
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Studying the Pulmonary Endothelium in Health and Disease An Official American Thoracic Society Workshop Report
errAMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY
IF5.3
err2024-10-01
err0
errOAAI
errHough, Rebecca F.; Alvira, Cristina M.; Bastarache, Julie A.; Erzurum, Serpil C.; Kuebler, Wolfgang M.; Schmidt, Eric P.; Shimoda, Larissa A.; Abman, Steven H.; Alvarez, Diego F.; Belvitch, Patrick; Bhattacharya, Jahar; Birukov, Konstantin G.; Chan, Stephen Y.; Cornfield, David N.; Dudek, Steven M.; Garcia, Joe G. N.; Harrington, Elizabeth O.; Hsia, Connie C. W.; Islam, Mohammad Naimul; Jonigk, Danny D.; Kalinichenko, Vladimir V.; Kolb, Todd M.; Lee, Ji Young; Mammoto, Akiko; Mehta, Dolly; Rounds, Sharon; Schupp, Jonas C.; Shaver, Ciara M.; Suresh, Karthik; Tambe, Dhananjay T.; Ventetuolo, Corey E.; Yoder, Mervin C.; Stevens, Troy; Damarla, Mahendra
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Single-Cell Profiling Reveals Immune Aberrations in Progressive Idiopathic Pulmonary Fibrosis
errAMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE
IF19.4
err2024-08-15
err4
errOAAI
errUnterman, Avraham; Zhao, Amy Y.; Neumark, Nir; Schupp, Jonas C.; Ahangari, Farida; Cosme, Carlos; Sharma, Prapti; Flint, Jasper; Stein, Yan; Ryu, Changwan; Ishikawa, Genta; Sumida, Tomokazu S.; Gomez, Jose L.; Herazo-Maya, Jose D.; Cruz, Charles S. Dela; Herzog, Erica L.; Kaminski, Naftali
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Comparison of organ involvement clusters in Black and White American sarcoidosis patients from a prospectively collected patient registry
errRESPIRATORY MEDICINE
IF3.1
err2024-05-01
err0
errOAAI
errHarper, Logan J.; Tauquir, Anoosha; Huang, Shuaiqi; Wang, Xiaofeng; Schupp, Jonas C.; Baughman, Robert; Culver, Daniel A.
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The nature of chronic rejection after lung transplantation: a murine orthotopic lung transplant study
errFRONTIERS IN IMMUNOLOGY
IF5.9
err2024-04-25
err0
errOAAI
errHeigl, Tobias; Kaes, Janne; Aelbrecht, Celine; Serre, Jef; Yamada, Yoshito; Geudens, Vincent; Van Herck, Anke; Vanstapel, Arno; Sacreas, Annelore; Ordies, Sofie; Frick, Anna; Saez Gimenez, Berta; Van Slambrouck, Jan; Beeckmans, Hanne; Ozturk, Nilufer A. Acet; Orlitova, Michaela; Vaneylen, Annemie; Claes, Sandra; Schols, Dominique; Velde, Greetje Vande; Schupp, Jonas; Kaminski, Naftali; Boesch, Markus; Korf, Hannelie; van der Merwe, Schalk; Dupont, Lieven; Vanoirbeek, Jeroen; Godinas, Laurent; Van Raemdonck, Dirk E.; Janssens, Wim; Gayan-Ramirez, Ghislaine; Ceulemans, Laurens J.; Mcdonough, John E.; Verbeken, Erik K.; Vos, Robin; Vanaudenaerde, Bart M.
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Lung endothelium, tau, and amyloids in health and disease
errPHYSIOLOGICAL REVIEWS
IF28.7
err2024-04-01
err9
errOAAI
errBalczon, Ron; Lin, Mike T.; Voth, Sarah; Nelson, Amy R.; Schupp, Jonas C.; Wagener, Brant M.; Pittet, Jean-Francois; Stevens, Troy
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Single-cell transcriptomic analysis of human pleura reveals stromal heterogeneity and informs in vitro models of mesothelioma
errEUROPEAN RESPIRATORY JOURNAL
IF21
err2024-01-11
err0
errOAAI
errObacz, Joanna; Valer, Jose Antonio; Nibhani, Reshma; Adams, Taylor S.; Schupp, Jonas C.; Veale, Niki; Lewis-Wade, Amanah; Flint, Jasper; Hogan, John; Aresu, Giuseppe; Coonar, Aman S.; Peryt, Adam; Biffi, Giulia; Kaminski, Naftali; Francies, Hayley; Rassl, Doris M.; Garnett, Mathew J.; Rintoul, Robert C.; Marciniak, Stefan J.
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Increased expression of CXCL6 in secretory cells drives fibroblast collagen synthesis and is associated with increased mortality in idiopathic pulmonary fibrosis
errEUROPEAN RESPIRATORY JOURNAL
IF21
err2023-11-02
err3
PREAI
errBahudhanapati, Harinath; Tan, Jiangning; Apel, Rosa Marie; Seeliger, Benjamin; Schupp, Jonas; Li, Xiaoyun; Sullivan, Daniel I.; Sembrat, John; Rojas, Mauricio; Tabib, Tracy; Valenzi, Eleanor; Lafyatis, Robert; Mitash, Nilay; Pineda, Ricardo Hernandez; Jawale, Chetan; Peroumal, Doureradjou; Biswas, Partha; Tedrow, John; Adams, Taylor; Kaminski, Naftali; Wuyts, Wim A.; McDyer, John F.; Gibson, Kevin F.; Alder, Jonathan K.; Konigshoff, Melanie; Zhang, Yingze; Nouraie, Mehdi; Prasse, Antje; Kass, Daniel J.
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Late Breaking Abstract - Diversity of endothelial cells in restrictive allograft syndrome
errEUROPEAN RESPIRATORY JOURNAL
IF21
err2023-10-27
err0
PREAI
errLeiber, Lena Maureen; Yilmaz, Hande; Christian, Leonard; Kamp, Jan-Christopher; Neubert, Lavinia; Welte, Tobias; Falk, Christine; Jonigk, Danny; Gottlieb, Jens; Schupp, Jonas Christian
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Morphomolecular analysis of the capillary network in alveolar capillary dysplasia
errEUROPEAN RESPIRATORY JOURNAL
IF21
err2023-10-27
err0
PREAI
errKamp, Jan-Christopher; Neubert, Lavinia; Schupp, Jonas C.; Wrede, Christoph; Laenger, Florian; Welte, Tobias; Schwerk, Nicolaus; Reichmann, Jakob; Salditt, Tim; Bergmann, Anke K.; Von Hardenberg, Sandra; Kreipe, Hans H.; Olsson, Karen M.; Fuge, Jan; Park, Da-Hee; Hoeper, Marius M.; Jonigk, Danny D.; Knudsen, Lars; Kuehnel, Mark P.
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Research Directions

No research directions
Co-authors
Cooperation Journals
S
Stefan Schreiber
H-index: 192 · Papers: 1.9K
M
Michael A. Matthay
H-index: 169 · Papers: 1.3K
A
Andrew G. Nicholson
H-index: 148 · Papers: 697
D
David A. Hafler
H-index: 132 · Papers: 684
T
Tobias Welte
H-index: 127 · Papers: 2.0K
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