Not logged in The History of Chromosomal Instability in Genome-Doubled Tumors Baker, Toby M.; Lai, Siqi; Lynch, Andrew R.; Lesluyes, Tom; Yan, Haixi; Ogilvie, Huw A.; Verfaillie, Annelien; Dentro, Stefan; Bowes, Amy L.; Pillay, Nischalan; Flanagan, Adrienne M.; Swanton, Charles; Spellman, Paul T.; Tarabichi, Maxime; Van Loo, Peter Share Save
Single-cell and spatial transcriptomics analysis of non-small cell lung cancer De Zuani, Marco; Xue, Haoliang; Park, Jun Sung; Dentro, Stefan C.; Seferbekova, Zaira; Tessier, Julien; Curras-Alonso, Sandra; Hadjipanayis, Angela; Athanasiadis, Emmanouil I.; Gerstung, Moritz; Bayraktar, Omer; Cvejic, Ana Share Save
CREDAC: Copy number-based reference-free expression deconvolution analysis of cancers Castignani, Carla; Demeulemeester, Jonas; Pich, Oriol; Lesluyes, Tom; Hynds, Robert E.; Pearce, David R.; Cadieux, Elizabeth Larose; Dentro, Stefan C.; Kanu, Nnenna; Swanton, Charles; Van Loo, Peter Share Save
Genomic evolution shapes prostate cancer disease type Woodcock, Dan J.; Sahli, Atef; Teslo, Ruxandra; Bhandari, Vinayak; Gruber, Andreas J.; Ziubroniewicz, Aleksandra; Gundem, Gunes; Xu, Yaobo; Butler, Adam; Anokian, Ezequiel; Pope, Bernard J.; Jung, Chol-Hee; Tarabichi, Maxime; Dentro, Stefan C.; Farmery, J. Henry R.; Van Loo, Peter; Warren, Anne Y.; Gnanapragasam, Vincent; Hamdy, Freddie C.; Bova, G. Steven; Foster, Christopher S.; Neal, David E.; Lu, Yong-Jie; Kote-Jarai, Zsofia; Fraser, Michael; Bristow, Robert G.; Boutros, Paul C.; Costello, Anthony J.; Corcoran, Niall M.; Hovens, Christopher M.; Massie, Charlie E.; Lynch, Andy G.; Brewer, Daniel S.; Eeles, Rosalind A.; Cooper, Colin S.; Wedge, David C. Share Save
SINGLE CELL TRANSCRIPTOMIC ANALYSIS IDENTIFIES DISTINCT INTRATUMORAL SUBCLONES IN MENINGIOMA Blume, C.; Tang, Y.; Dogan, H.; Ritter, M.; Dentro, S.; von Deimling, A.; Gerstung, M.; Schlesner, M.; Sahm, F.; Maas, S. L. N. Share Save
Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition (vol 52, pg 306, 2020) Rodriguez-Martin, Bernardo; Alvarez, Eva G.; Baez-Ortega, Adrian; Zamora, Jorge; Supek, Fran; Demeulemeester, Jonas; Santamarina, Martin; Ju, Young Seok; Temes, Javier; Garcia-Souto, Daniel; Detering, Harald; Li, Yilong; Rodriguez-Castro, Jorge; Dueso-Barroso, Ana; Bruzos, Alicia L.; Dentro, Stefan C.; Blanco, Miguel G.; Contino, Gianmarco; Ardeljan, Daniel; Tojo, Marta; Roberts, Nicola D.; Zumalave, Sonia; Edwards, Paul A.; Weischenfeldt, Joachim; Puiggros, Montserrat; Chong, Zechen; Chen, Ken; Lee, Eunjung Alice; Wala, Jeremiah A.; Raine, Keiran M.; Butler, Adam; Waszak, Sebastian M.; Navarro, Fabio C. P.; Schumacher, Steven E.; Monlong, Jean; Maura, Francesco; Bolli, Niccolo; Bourque, Guillaume; Gerstein, Mark; Park, Peter J.; Wedge, David C.; Beroukhim, Rameen; Torrents, David; Korbel, Jan O.; Martincorena, Inigo; Fitzgerald, Rebecca C.; Van Loo, Peter; Kazazian, Haig H.; Burns, Kathleen H.; Campbell, Peter J.; Tubio, Jose M. C. Share Save
Notch1 mutations drive clonal expansion in normal esophageal epithelium but impair tumor growth Abby, Emilie; Dentro, Stefan C. C.; Hall, Michael W. J.; Fowler, Joanna C. C.; Ong, Swee Hoe; Sood, Roshan; Herms, Albert; Piedrafita, Gabriel; Abnizova, Irina; Siebel, Christian W. W.; Gerstung, Moritz; Hall, Benjamin A. A.; Jones, Philip H. H. Share Save
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p53 mutation in normal esophagus promotes multiple stages of carcinogenesis but is constrained by clonal competition Murai, Kasumi; Dentro, Stefan; Ong, Swee Hoe; Sood, Roshan; Fernandez-Antoran, David; Herms, Albert; Kostiou, Vasiliki; Abnizova, Irina; Hall, Benjamin A.; Gerstung, Moritz; Jones, Philip H. Share Save
Clonal diversification and histogenesis of malignant germ cell tumours Oliver, Thomas R. W.; Chappell, Lia; Sanghvi, Rashesh; Deighton, Lauren; Ansari-Pour, Naser; Dentro, Stefan C.; Young, Matthew D.; Coorens, Tim H. H.; Jung, Hyunchul; Butler, Tim; Neville, Matthew D. C.; Leongamornlert, Daniel; Sanders, Mathijs A.; Hooks, Yvette; Cagan, Alex; Mitchell, Thomas J.; Cortes-Ciriano, Isidro; Warren, Anne Y.; Wedge, David C.; Heer, Rakesh; Coleman, Nicholas; Murray, Matthew J.; Campbell, Peter J.; Rahbari, Raheleh; Behjati, Sam Share Save
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Whole-genome analysis of Nigerian patients with breast cancer reveals ethnic-driven somatic evolution and distinct genomic subtypes Ansari-Pour, Naser; Zheng, Yonglan; Yoshimatsu, Toshio F.; Sanni, Ayodele; Ajani, Mustapha; Reynier, Jean-Baptiste; Tapinos, Avraam; Pitt, Jason J.; Dentro, Stefan; Woodard, Anna; Rajagopal, Padma Sheila; Fitzgerald, Dominic; Gruber, Andreas J.; Odetunde, Abayomi; Popoola, Abiodun; Falusi, Adeyinka G.; Babalola, Chinedum Peace; Ogundiran, Temidayo; Ibrahim, Nasiru; Barretina, Jordi; Van Loo, Peter; Chen, Mengjie; White, Kevin P.; Ojengbede, Oladosu; Obafunwa, John; Huo, Dezheng; Wedge, David C.; Olopade, Olufunmilayo, I Share Save
Lineage-defined leiomyosarcoma subtypes emerge years before diagnosis and determine patient survival Anderson, Nathaniel D.; Babichev, Yael; Fuligni, Fabio; Comitani, Federico; Layeghifard, Mehdi; Venier, Rosemarie E.; Dentro, Stefan C.; Maheshwari, Anant; Guram, Sheena; Wunker, Claire; Thompson, J. Drew; Yuki, Kyoko E.; Hou, Huayun; Zatzman, Matthew; Light, Nicholas; Bernardini, Marcus Q.; Wunder, Jay S.; Andrulis, Irene L.; Ferguson, Peter; Razak, Albiruni R. Abdul; Swallow, Carol J.; Dowling, James J.; Al-Awar, Rima S.; Marcellus, Richard; Rouzbahman, Marjan; Gerstung, Moritz; Durocher, Daniel; Alexandrov, Ludmil B.; Dickson, Brendan C.; Gladdy, Rebecca A.; Shlien, Adam Share Save
Selection of Oncogenic Mutant Clones in Normal Human Skin Varies with Body Site Fowler, Joanna C.; King, Charlotte; Bryant, Christopher; Hall, Michael W. J.; Sood, Roshan; Ong, Swee Hoe; Earp, Eleanor; Fernandez-Antoran, David; Koeppel, Jonas; Dentro, Stefan C.; Shorthouse, David; Durrani, Amer; Fife, Kate; Rytina, Edward; Milne, Doreen; Roshan, Amit; Mahububani, Krishnaa; Saeb-Parsy, Kourosh; Hall, Benjamin A.; Gerstung, Moritz; Jones, Philip H. Share Save
Spatial competition shapes the dynamic mutational landscape of normal esophageal epithelium Colom, Bartomeu; Alcolea, Maria P.; Piedrafita, Gabriel; Hall, Michael W. J.; Wabik, Agnieszka; Dentro, Stefan C.; Fowler, Joanna C.; Herms, Albert; King, Charlotte; Ong, Swee Hoe; Sood, Roshan K.; Gerstung, Moritz; Martincorena, Inigo; Hall, Benjamin A.; Jones, Philip H. Share Save
Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition Rodriguez-Martin, Bernardo; Alvarez, Eva G.; Baez-Ortega, Adrian; Zamora, Jorge; Supek, Fran; Demeulemeester, Jonas; Santamarina, Martin; Ju, Young Seok; Temes, Javier; Garcia-Souto, Daniel; Detering, Harald; Li, Yilong; Rodriguez-Castro, Jorge; Dueso-Barroso, Ana; Bruzos, Alicia L.; Dentro, Stefan C.; Blanco, Miguel G.; Contino, Gianmarco; Ardeljan, Daniel; Tojo, Marta; Roberts, Nicola D.; Zumalave, Sonia; Edwards, Paul A. W.; Weischenfeldt, Joachim; Puiggros, Montserrat; Chong, Zechen; Chen, Ken; Lee, Eunjung Alice; Wala, Jeremiah A.; Raine, Keiran; Butler, Adam; Waszak, Sebastian M.; Navarro, Fabio C. P.; Schumacher, Steven E.; Monlong, Jean; Maura, Francesco; Bolli, Niccolo; Bourque, Guillaume; Gerstein, Mark; Park, Peter J.; Wedge, David C.; Beroukhim, Rameen; Torrents, David; Korbel, Jan O.; Martincorena, Inigo; Fitzgerald, Rebecca C.; Van Loo, Peter; Kazazian, Haig H.; Burns, Kathleen H.; Campbell, Peter J.; Tubio, Jose M. C.; Akdemir, Kadir C.; Boutros, Paul C.; Bowtell, David D. L.; Brors, Benedikt; Chan, Kin; Cortes-Ciriano, Isidro; Dunford, Andrew J.; Edwards, Paul A.; Estivill, Xavier; Etemadmoghadam, Dariush; Feuerbach, Lars; Fink, J. Lynn; Frenkel-Morgenstern, Milana; Garsed, Dale W.; Gordenin, Dmitry A.; Haan, David; Haber, James E.; Hess, Julian M.; Hutter, Barbara; Imielinski, Marcin; Jones, David T. W.; Kazanov, Marat D.; Klimczak, Leszek J.; Koh, Youngil; Kumar, Kiran; Lee, Jake June-Koo; Lynch, Andy G.; Macintyre, Geoff; Markowetz, Florian; Martinez-Fundichely, Alexander; Meyerson, Matthew; Miyano, Satoru; Nakagawa, Hidewaki; Ossowski, Stephan; Pearson, John, V; Rippe, Karsten; Roberts, Steven A.; Scully, Ralph; Shackleton, Mark; Sidiropoulos, Nikos; Sieverling, Lina; Stewart, Chip; Villasante, Izar; Waddell, Nicola; Yang, Lixing; Yao, Xiaotong; Yoon, Sung-Soo; Zhang, Cheng-Zhong Share Save
A community effort to create standards for evaluating tumor subclonal reconstruction Salcedo, Adriana; Tarabichi, Maxime; Espiritu, Shadrielle Melijah G.; Deshwar, Amit G.; David, Matei; Wilson, Nathan M.; Dentro, Stefan; Wintersinger, Jeff A.; Liu, Lydia Y.; Ko, Minjeong; Sivanandan, Srinivasan; Zhang, Hongjiu; Zhu, Kaiyi; Ou Yang, Tai-Hsien; Chilton, John M.; Buchanan, Alex; Lalansingh, Christopher M.; P'ng, Christine; Anghel, Catalina V.; Umar, Imaad; Lo, Bryan; Zou, William; Simpson, Jared T.; Stuart, Joshua M.; Anastassiou, Dimitris; Guan, Yuanfang; Ewing, Adam D.; Ellrott, Kyle; Wedge, David C.; Morris, Quaid; Van Loo, Peter; Boutros, Paul C.; Jha, Alokkumar; Huang, Tanxiao; Yang, Tsun-Po; Peifer, Martin; Sahinalp, Cenk; Malikic, Salem; Vazquez-Garcia, Ignacio; Mustonen, Ville; Yang, Hsih-Te; Lee, Ken-Ray; Ji, Yuan; Sengupta, Subhajit; Rudewicz, Justine; Nikolski, Macha; Schaeverbeke, Quentin; Yuan, Ke; Markowetz, Florian; Macintyre, Geoff; Cmero, Marek; Chaudhary, Belal; Leshchiner, Ignaty; Livitz, Dimitri; Getz, Gad; Loher, Phillipe; Yu, Kaixian; Wang, Wenyi; Zhu, Hongtu Share Save
The life history of breast cancer in Nigerian women: Evidence for ethnic differences in tumor evolution based on whole-genome sequencing Ansari-Pour, Naser; Pitt, Jason J.; Dentro, Stefan; Fitzgerald, Dominic; Zheng, Yonglan; Yoshimatsu, Toshio F.; Rajagopal, Padma; Gruber, Andreas; Sanni, Ayodele; Oluwasola, Olayiwola; Ajani, Mustapha; Odetunde, Abayomi; Popoola, Abiodun; Falusi, Adeyinka; Ogundiran, Temidayo; Obafunwa, John; Ojengbede, Oladosu; Ibrahim, Nasiru; White, Kevin P.; Huo, Dezheng; Van Loo, Peter; Wedge, David C.; Olopade, Olufunmilayo Share Save
Pervasive intra-tumour heterogeneity and subclonal selection across cancer types Dentro, Stefan; Leshchiner, Ignaty; Haase, Kerstin; Wintersinger, Jeff; Deshwar, Amit; Tarabichi, Maxime; Rubanova, Yulia; Yu, Kaixian; Garcia, Ignacio Vazquez; Macintyre, Geoff; Kleinheinz, Kortine; Livitz, Dimitri; Malikic, Salem; Donmez, Nilgun; Sengupta, Subhajit; Ji, Yuan; Demeulemeester, Jonas; Anur, Pavana; Jolly, Clemency; Cmero, Marek; Rosebrock, Daniel; Schumacher, Steve; Fan, Yu; Fittall, Matthew; Yao, Xiaotong; Lee, Juhee; Schlesner, Matthias; Zhu, Hongtu; Adams, David; Getz, Gad; Boutros, Paul; Imielinski, Marcin; Beroukhim, Rameen; Sahinalp, Cenk; Peifer, Martin; Martincorena, Inigo; Markowetz, Florian; Mustonen, Ville; Yuan, Ke; Gerstung, Moritz; Wang, Wenyi; Spellman, Paul; Morris, Quaid; Wedge, David; Van Loo, Peter Share Save
The evolutionary history of 2,658 cancers Jolly, Clemency; Gerstung, Moritz; Leshchiner, Ignaty; Dentro, Stefan C.; Gonzalez, Santiago; Mitchell, Thomas J.; Rubanova, Yulia; Anur, Pavana; Rosebrock, Daniel; Yu, Kaixian; Tarabichi, Maxime; Deshwar, Amit; Wintersinger, Jeff; Kleinheinz, Kortine; Vasquez-Garcia, Ignacio; Haase, Kerstin; Sengupta, Subhajit; Macintyre, Geoff; Malikic, Salem; Donmez, Nilgun; Livitz, Dimitri G.; Cmero, Mark; Demeulemeester, Jonas; Schumacher, Steve; Fan, Yu; Yao, Xiaotong; Lee, Juhee; Schlesner, Matthias; Boutros, Paul C.; Bowtell, David D.; Zhu, Hongtu; Getz, Gad; Imielinski, Marcin; Beroukhim, Rameen; Sahinalp, S. Cenk; Ji, Yuan; Peifer, Martin; Markowetz, Florian; Mustonen, Ville; Juan, Ke; Wang, Wenyi; Morris, Quaid D.; Spellman, Paul T.; Wedge, David C.; Van Loo, Peter Share Save
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