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Alexej Abyzov

Department of Quantitative Health Sciences

56H-index
183Paper Count
6.5WCitation Count
Published Papers 47
Publication Date
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Karyotypic Profiling of Induced Pluripotent Stem Cells Derived from a Xeroderma Pigmentosum Group C Patient
errCells 2025, Vol. 14, Page 1985
IF5.2
err2025-12-14
err0
errOAAI
errAlmaqdad Alsalloum; Natalia Mingaleva; Ekaterina Gornostal; Zoia Antysheva; Peter Sparber; Mikhail Skoblov; Victoria Pozhitnova; Tatiana Belysheva; Aygun Levashova; Ekaterina Kuznetsova; Yulia Suvorova; Julia Krupinova; Viktor Bogdanov; Alexej Abyzov; Olga Mityaeva; Pavel Volchkov
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errSave
The Somatic Mosaicism across Human Tissues Network
errNature
IF48.5
err2025-07-02
err0
PREAI
errTim H. H. Coorens; Ji Won Oh; Yujin Angelina Choi; Nam Seop Lim; Boxun Zhao; Adam Voshall; Alexej Abyzov; Lucinda Antonacci-Fulton; Samuel Aparicio; Kristin G. Ardlie; Thomas J. Bell; James T. Bennett; Bradley E. Bernstein; Thomas G. Blanchard; Alan P. Boyle; Jason D. Buenrostro; Kathleen H. Burns; Fei Chen; Rui Chen; Sangita Choudhury; Harsha V. Doddapaneni; Evan E. Eichler; Gilad D. Evrony; Melissa A. Faith; Thomas G. Fazzio; Robert S. Fulton; Manuel Garber; Nils Gehlenborg; Soren Germer; Gad Getz; Richard A. Gibbs; Raquel G. Hernandez; Fulai Jin; Jan O. Korbel; Dan A. Landau; Heather A. Lawson; Niall J. Lennon; Heng Li; Yan Li; Po-Ru Loh; Gabor Marth; Michael J. McConnell; Ryan E. Mills; Stephen B. Montgomery; Pradeep Natarajan; Peter J. Park; Rahul Satija; Fritz J. Sedlazeck; Diane D. Shao; Hui Shen; Andrew B. Stergachis; Hunter R. Underhill; Alexander E. Urban; Melissa W. VonDran; Christopher A. Walsh; Ting Wang; Tao P. Wu; Chenghang Zong; Eunjung Alice Lee; Flora M. Vaccarino
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Transgenerational transmission of post-zygotic mutations suggests symmetric contribution of first two blastomeres to human germline (vol 15, 9117, 2024)
errNATURE COMMUNICATIONS
IF15.7
err2025-03-10
err0
errOAAI
errJang, Yeongjun; Tomasini, Livia; Bae, Taejeong; Szekely, Anna; Vaccarino, Flora M.; Abyzov, Alexej
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errSave
Interneuron Loss and Microglia Activation by Transcriptome Analyses in the Basal Ganglia of Tourette Disorder
errBiological Psychiatry
IF9
err2025-01-30
err0
PREAI
errYifan Wang; Liana Fasching; Feinan Wu; Milovan Suvakov; Anita Huttner; Sabina Berretta; Rosalinda Roberts; James F. Leckman; Thomas V. Fernandez; Alexej Abyzov; Flora M. Vaccarino
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errSave
Transgenerational transmission of post-zygotic mutations suggests symmetric contribution of first two blastomeres to human germline
errNATURE COMMUNICATIONS
IF15.7
err2024-10-23
err0
errOAAI
errJang, Yeongjun; Tomasini, Livia; Bae, Taejeong; Szekely, Anna; Vaccarino, Flora M.; Abyzov, Alexej
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errSave
Characterization of enhancer activity in early human neurodevelopment using Massively Parallel Reporter Assay (MPRA) and forebrain organoids
errSCIENTIFIC REPORTS
IF3.9
err2024-02-16
err3
errOAAI
errCapauto, Davide; Wang, Yifan; Wu, Feinan; Norton, Scott; Mariani, Jessica; Inoue, Fumitaka; Crawford, Gregory E.; Ahituv, Nadav; Abyzov, Alexej; Vaccarino, Flora M.
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Efficient reconstruction of cell lineage trees for cell ancestry and cancer
errNUCLEIC ACIDS RESEARCH
IF13.1
err2023-04-07
err2
errOAAI
errJang, Yeongjun; Fasching, Liana; Bae, Taejeong; Tomasini, Livia; Schreiner, Jeremy; Szekely, Anna; Fernandez, Thomas, V; Leckman, James F.; Vaccarino, Flora M.; Abyzov, Alexej
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errSave
Clonally Selected Lines After CRISPR-Cas Editing Are Not Isogenic
errCRISPR JOURNAL
IF4
err2023-04-01
err6
errOAAI
errPanda, Arijit; Suvakov, Milovan; Mariani, Jessica; Drucker, Kristen L.; Park, Yohan; Jang, Yeongjun; Kollmeyer, Thomas M.; Sarkar, Gobinda; Bae, Taejeong; Kim, Jean J.; Yoon, Wan Hee; Jenkins, Robert B.; Vaccarino, Flora M.; Abyzov, Alexej
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errSave
Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development
errNATURE GENETICS
IF31.8
err2023-01-12
err46
errOAAI
errChung, Changuk; Yang, Xiaoxu; Bae, Taejeong; Vong, Keng Ioi; Mittal, Swapnil H.; Donkels, Catharina; Westley Phillips, H.; Li, Zhen; Marsh, Ashley P. L.; Breuss, Martin; Ball, Laurel; Garcia, Camila Araujo Bernardino; George, Renee; Gu, Jing; Xu, Mingchu; Barrows, Chelsea; James, Kiely; Stanley, Valentina; Nidhiry, Anna; Khoury, Sami; Howe, Gabrielle; Riley, Emily; Xu, Xin; Copeland, Brett; Wang, Yifan G.; Kim, Se Hoon L.; Kang, Hoon-Chul W.; Schulze-Bonhage, Andreas; Haas, Carola; Urbach, Horst; Prinz, Marco; Limbrick, David A.; Gurnett, Christina; Smyth, Matthew C.; Sattar, Shifteh M.; Nespeca, Mark B.; Gonda, David V.; Imai, Katsumi Y.; Takahashi, Yukitoshi E.; Chen, Hsin-Hung B.; Tsai, Jin-Wu; Conti, Valerio; Guerrini, Renzo; Devinsky, Orrin; Silva, Wilson; Machado, Helio M.; Mathern, Gary; Abyzov, Alexej; Baldassari, Sara; Baulac, Stephanie; Gleeson, Joseph G.
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errSave
Control-independent mosaic single nucleotide variant detection with DeepMosaic
errNATURE BIOTECHNOLOGY
IF41.7
err2023-01-02
err17
errOAAI
errYang, Xiaoxu; Xu, Xin; Breuss, Martin W.; Antaki, Danny; Ball, Laurel L. V.; Chung, Changuk; Shen, Jiawei; Li, Chen; George, Renee D.; Wang, Yifan; Bae, Taejeong; Cheng, Yuhe; Abyzov, Alexej M.; Wei, Liping; Alexandrov, Ludmil B.; Sebat, Jonathan L.; Gleeson, Joseph G.
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errSave
Somatic genomic mosaicism in the brain during aging: Scratching the surface
errCLINICAL AND TRANSLATIONAL MEDICINE
IF6.8
err2022-12-10
err1
errOAAI
errBae, Taejeong; Wang, Yifan; Vaccarino, Flora M.; Abyzov, Alexej
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RESOLVING THE EXACT BREAKPOINTS AND SEQUENCE REARRANGEMENTS OF LARGE NEUROPSYCHIATRIC COPY NUMBER VARIATIONS (CNVS) AT SINGLE BASE-PAIR RESOLUTION USING CRISPR-TARGETED ULTRALONG READ SEQUENCING (CTLR-SEQ)
errEUROPEAN NEUROPSYCHOPHARMACOLOGY
IF6.7
err2022-10-01
err0
PREAI
errZhou, Bo; Shin, GiWon; Vervoort, Lisanne; Greer, Stephanie; Huang, Yiling; Roychowdhury, Tanmoy; Pattni, Reenal; Abyzov, Alexej; Vermeesch, Joris; Ji, Hanlee; Urban, Alexander
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errSave
CNVpytor: a tool for copy number variation detection and analysis from read depth and allele imbalance in whole-genome sequencing
errGIGASCIENCE
IF3.9
err2021-11-18
err39
errOAAI
errSuvakov, Milovan; Panda, Arijit; Diesh, Colin; Holmes, Ian; Abyzov, Alexej
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errSave
Comprehensive identification of somatic nucleotide variants in human brain tissue
errGENOME BIOLOGY
IF9.4
err2021-03-29
err22
errOAAI
errWang, Yifan; Bae, Taejeong; Thorpe, Jeremy; Sherman, Maxwell A.; Jones, Attila G.; Cho, Sean; Daily, Kenneth; Dou, Yanmei; Ganz, Javier; Galor, Alon; Lobon, Irene; Pattni, Reenal; Rosenbluh, Chaggai; Tomasi, Simone; Tomasini, Livia; Yang, Xiaoxu; Zhou, Bo; Akbarian, Schahram; Ball, Laurel L.; Bizzotto, Sara; Emery, Sarah B.; Doan, Ryan; Fasching, Liana; Jang, Yeongjun; Juan, David; Lizano, Esther; Luquette, Lovelace J.; Moldovan, John B.; Narurkar, Rujuta; Oetjens, Matthew T.; Rodin, Rachel E.; Sekar, Shobana; Shin, Joo Heon; Soriano, Eduardo; Straub, Richard E.; Zhou, Weichen; Chess, Andrew; Gleeson, Joseph G.; Marques-Bonet, Tomas; Park, Peter J.; Peters, Mette A.; Pevsner, Jonathan; Walsh, Christopher A.; Weinberger, Daniel R.; Vaccarino, Flora M.; Moran, John, V; Urban, Alexander E.; Kidd, Jeffrey M.; Mills, Ryan E.; Abyzov, Alexej
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errSave
The role of somatic mosaicism in brain disease
errCURRENT OPINION IN GENETICS & DEVELOPMENT
IF3.6
err2020-12-01
err17
errOAAI
errJourdon, Alexandre; Fasching, Liana; Scuderi, Soraya; Abyzov, Alexej; Vaccarino, Flora M.
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errSave
Complex mosaic structural variations in human fetal brains
errGENOME RESEARCH
IF5.5
err2020-10-29
err17
errOAAI
errSekar, Shobana; Tomasini, Livia; Proukakis, Christos; Bae, Taejeong; Manlove, Logan; Jang, Yeongjun; Scuderi, Soraya; Zhou, Bo; Kalyva, Maria; Amiri, Anahita; Mariani, Jessica; Sedlazeck, Fritz J.; Urban, Alexander E.; Vaccarino, Flora M.; Abyzov, Alexej
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errSave
Cell Lineage Tracing and Cellular Diversity in Humans
errANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, VOL 21, 2020
IF0
err2020-08-31
err13
errOAAI
errAbyzov, Alexej; Vaccarino, Flora M.
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errSave
Adult diffuse glioma GWAS by molecular subtype identifies variants in D2HGDH, FAM20C and GMEB2
errCANCER RESEARCH
IF16.6
err2020-08-15
err0
PREAI
errEckel-Passow, Jeanette E.; Drucker, Kristen L.; Kollmeyer, Thomas M.; Kosel, Matthew L.; Decker, Paul A.; Molinaro, Annette M.; Rice, Terri; Praska, Corrine E.; Clark, Lauren E.; Caron, Alissa A.; Abyzov, Alexej; Batzler, Anthony; Song, Jun S.; Pekmezci, Melike; Hansen, Helen M.; McCoy, Lucie S.; Bracci, Paige M.; Wiemels, Joseph; Wiencke, John K.; Francis, Stephen; Burns, Terence C.; Giannini, Caterina; Lachance, Daniel H.; Wrensch, Margaret; Jenkins, Robert B.
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errSave
PsychENCODE and beyond: transcriptomics and epigenomics of brain development and organoids
errNEUROPSYCHOPHARMACOLOGY
IF7.1
err2020-07-13
err10
errOAAI
errJourdon, Alexandre; Scuderi, Soraya; Capauto, Davide; Abyzov, Alexej; Vaccarino, Flora M.
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errSave
Adult diffuse glioma GWAS by molecular subtype identifies variants in D2HGDH and FAM20C
errNEURO-ONCOLOGY
IF13.4
err2020-05-09
err21
errOAAI
errEckel-Passow, Jeanette E.; Drucker, Kristen L.; Kollmeyer, Thomas M.; Kosel, Matt L.; Decker, Paul A.; Molinaro, Annette M.; Rice, Terri; Praska, Corinne E.; Clark, Lauren; Caron, Alissa; Abyzov, Alexej; Batzler, Anthony; Song, Jun S.; Pekmezci, Melike; Hansen, Helen M.; McCoy, Lucie S.; Bracci, Paige M.; Wiemels, Joseph; Wiencke, John K.; Francis, Stephen; Burns, Terry C.; Giannini, Caterina; Lachance, Daniel H.; Wrensch, Margaret; Jenkins, Robert B.
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Research Directions

No research directions
Co-authors
Cooperation Journals
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Gad Getz
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E
Evan E. Eichler
H-index: 191 · Papers: 864
M
Mark Gerstein
H-index: 191 · Papers: 1.2K
R
Richard A. Gibbs
H-index: 190 · Papers: 1.3K
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