Philip A. Cook - Publications, H-index & Citations

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Philip A. Cook

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43H-index

168Paper Count

2.3WCitation Count

Published Papers 52

Publication Date

Contusions bias cortical thickness estimates after traumatic brain injury: A TRACK-TBI study

neuroimage: clinical

IF0

2026-05-06

OAAI

Daniel Brennan; Andrea L.C. Schneider; Russell Taki Shinohara; Ramon Diaz-Arrastia; Philip A. Cook; James C. Gee; James J. Gugger

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Enrichment of patients with concomitant limbic-predominant age-related TDP-43 encephalopathy (LATE) on the Alzheimer's disease continuum using hippocampal volume

Alzheimer's & Dementia

IF0

2025-12-13

OAAI

Nidhi S. Mundada; Xueying Lyu; Christopher A. Brown; Niyousha Sadeghpour; Emily McGrew; Long Xie; Philip A. Cook; James Gee; Paul A. Yushkevich; Sandhitsu R. Das; David A. Wolk; for the Alzheimer's Disease Neuroimaging Initiative

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Changes in brain connectivity and neurovascular dynamics during dexmedetomidine-induced loss of consciousness

Communications Biology

IF5.1

2025-08-20

OAAI

Panagiotis Fotiadis; Andrew R. McKinstry-Wu; Sarah M. Weinstein; Philip A. Cook; Mark Elliott; Matthew Cieslak; Jeffrey T. Duda; Theodore D. Satterthwaite; Russell T. Shinohara; Alexander Proekt; Max B. Kelz; John A. Detre; Dani S. Bassett

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Executive dysfunction relates to salience network desegregation in behavioural variant frontotemporal dementia

neuroimage clinical

IF0

2025-07-24

OAAI

Melanie A. Matyi; Hamsanandini Radhakrishnan; Christopher A. Olm; Jeffrey S. Phillips; Philip A. Cook; Emma Rhodes; James C. Gee; David J. Irwin; Corey T. McMillan; Lauren Massimo

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Human thalamocortical structural connectivity develops in line with a hierarchical axis of cortical plasticity

Nature Neuroscience

IF20

2025-07-04

OAAI

Valerie J. Sydnor; Joëlle Bagautdinova; Bart Larsen; Michael J. Arcaro; Deanna M. Barch; Dani S. Bassett; Aaron F. Alexander-Bloch; Philip A. Cook; Sydney Covitz; Alexandre R. Franco; Raquel E. Gur; Ruben C. Gur; Allyson P. Mackey; Kahini Mehta; Steven L. Meisler; Michael P. Milham; Tyler M. Moore; Eli J. Müller; David R. Roalf; Taylor Salo; Gabriel Schubiner; Jakob Seidlitz; Russell T. Shinohara; James M. Shine; Fang-Cheng Yeh; Matthew Cieslak; Theodore D. Satterthwaite

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Microstructural Changes in the Tuberal Hypothalamus Correlate with Daytime Sleepiness in Lewy Body Disorders

Movement Disorders

IF7.6

2025-05-30

OAAI

Jesse S. Cohen MD; Hamsanandini Radhakrishnan PhD; Christopher A. Olm PhD; Sandhitsu R. Das PhD; Philip A. Cook PhD; David A. Wolk MD

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ANTsX neuroimaging-derived structural phenotypes of UK Biobank

SCIENTIFIC REPORTS

IF3.9

2024-04-17

OAAI

Tustison, Nicholas J.; Yassa, Michael A.; Rizvi, Batool; Cook, Philip A.; Holbrook, Andrew J.; Sathishkumar, Mithra T.; Tustison, Mia G.; Gee, James C.; Stone, James R.; Avants, Brian B.

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A practical evaluation of measures derived from compressed sensing diffusion spectrum imaging

HUMAN BRAIN MAPPING

IF3.3

2024-03-23

OAAI

Radhakrishnan, Hamsanandini; Zhao, Chenying; Sydnor, Valerie J.; Baller, Erica B.; Cook, Philip A.; Fair, Damien A.; Giesbrecht, Barry; Larsen, Bart; Murtha, Kristin; Roalf, David R.; Rush-Goebel, Sage; Shinohara, Russell T.; Shou, Haochang; Tisdall, M. Dylan; Vettel, Jean M.; Grafton, Scott T.; Cieslak, Matthew; Satterthwaite, Theodore D.

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Greater white matter degeneration and lower structural connectivity in non-amnestic vs. amnestic Alzheimer's disease

FRONTIERS IN NEUROSCIENCE

IF3.2

2024-03-18

OAAI

Phillips, Jeffrey S.; Adluru, Nagesh; Chung, Moo K.; Radhakrishnan, Hamsanandini; Olm, Christopher A.; Cook, Philip A.; Gee, James C.; Cousins, Katheryn A. Q.; Arezoumandan, Sanaz; Wolk, David A.; McMillan, Corey T.; Grossman, Murray; Irwin, David J.

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Impact of white matter hyperintensities on structural connectivity and cognition in cognitively intact ADNI participants

NEUROBIOLOGY OF AGING

IF3.5

2024-03-01

PREAI

Taghvaei, Mohammad; Mechanic-Hamilton, Dawn J.; Sadaghiani, Shokufeh; Shakibajahromi, Banafsheh; Dolui, Sudipto; Das, Sandhitsu; Brown, Christopher; Tackett, William; Khandelwal, Pulkit; Cook, Philip; Shinohara, Russell T.; Yushkevich, Paul; Bassett, Danielle S.; Wolk, David A.; Detre, John A.

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Diffusion MRI head motion correction methods are highly accurate but impacted by denoising and sampling scheme

HUMAN BRAIN MAPPING

IF3.3

2024-01-30

OAAI

Cieslak, Matthew; Cook, Philip A.; Shafiei, Golia; Tapera, Tinashe M.; Radhakrishnan, Hamsanandini; Elliott, Mark; Roalf, David R.; Oathes, Desmond J.; Bassett, Dani S.; Tisdall, M. Dylan; Rokem, Ariel; Grafton, Scott T.; Satterthwaite, Theodore D.

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Novel data-driven subtypes and stages of brain atrophy in the ALS-FTD spectrum

TRANSLATIONAL NEURODEGENERATION

IF15.2

2023-12-07

OAAI

Shen, Ting; Vogel, Jacob W.; Duda, Jeffrey; Phillips, Jeffrey S.; Cook, Philip A.; Gee, James; Elman, Lauren; Quinn, Colin; Amado, Defne A.; Baer, Michael; Massimo, Lauren; Grossman, Murray; Irwin, David J.; Mcmillan, Corey T.

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Development of white matter fiber covariance networks supports executive function in youth

CELL REPORTS

IF6.9

2023-12-01

OAAI

Bagautdinova, Joelle; Bourque, Josiane; Sydnor, Valerie J.; Cieslak, Matthew; Alexander-Boch, Aaron F.; Bertolero, Maxwell A.; Cook, Philip A.; Gur, Raquel E.; Gur, Ruben C.; Hu, Fenglin; Larsen, Bart; Moore, Tyler M.; Radhakrishnan, Hamsanandin; Roaf, David R.; Shinohara, Russel T.; Tapera, Tinashe M.; Zhao, Chenying; Sotiras, Aristeidis; Davatzikos, Christos; Satterthwaite, Theodore D.

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Young versus older subject diffusion magnetic resonance imaging data for virtual white matter lesion tractography

HUMAN BRAIN MAPPING

IF3.3

2023-05-06

OAAI

Taghvaei, Mohammad; Cook, Philip; Sadaghiani, Shokufeh; Shakibajahromi, Banafsheh; Tackett, William; Dolui, Sudipto; De, Debarun; Brown, Christopher; Khandelwal, Pulkit; Yushkevich, Paul; Das, Sandhitsu; Wolk, David A.; Detre, John A.

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Differential Impact of Anxious Misery Psychopathology on Multiple Representations of the Functional Connectome

BIOLOGICAL PSYCHIATRY: GLOBAL OPEN SCIENCE

IF3.7

2022-10-01

OAAI

Seok, Darsol; Beer, Joanne; Jaskir, Marc; Smyk, Nathan; Jaganjac, Adna; Makhoul, Walid; Cook, Philip; Elliott, Mark; Shinohara, Russell; Sheline, Yvette I.

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Phases of volume loss in patients with known frontotemporal lobar degeneration spectrum pathology

NEUROBIOLOGY OF AGING

IF3.5

2022-05-01

OAAI

Burke, Sarah E.; Phillips, Jeffrey S.; Olm, Christopher A.; Peterson, Claire S.; Cook, Phillip A.; Gee, James C.; Lee, Edward B.; Trojanowski, John Q.; Massimo, Lauren; Irwin, David J.; Grossman, Murray

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Mitigating site effects in covariance for machine learning in neuroimaging data

HUMAN BRAIN MAPPING

IF3.3

2021-12-14

OAAI

Chen, Andrew A.; Beer, Joanne C.; Tustison, Nicholas J.; Cook, Philip A.; Shinohara, Russell T.; Shou, Haochang

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Rates of longitudinal change in 18F-flortaucipir PET vary by brain region, cognitive impairment, and age in atypical Alzheimer's disease

ALZHEIMERS & DEMENTIA

IF11.1

2021-09-13

OAAI

Phillips, Jeffrey S.; Nitchie, Frederick J.; Da Re, Fulvio; Olm, Christopher A.; Cook, Philip A.; McMillan, Corey T.; Irwin, David J.; Gee, James C.; Dubroff, Jacob G.; Grossman, Murray; Nasrallah, Ilya M.

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QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data

NATURE METHODS

IF32.1

2021-06-21

112

OAAI

Cieslak, Matthew; Cook, Philip A.; He, Xiaosong; Yeh, Fang-Cheng; Dhollander, Thijs; Adebimpe, Azeez; Aguirre, Geoffrey K.; Bassett, Danielle S.; Betzel, Richard F.; Bourque, Josiane; Cabral, Laura M.; Davatzikos, Christos; Detre, John A.; Earl, Eric; Elliott, Mark A.; Fadnavis, Shreyas; Fair, Damien A.; Foran, Will; Fotiadis, Panagiotis; Garyfallidis, Eleftherios; Giesbrecht, Barry; Gur, Ruben C.; Gur, Raquel E.; Kelz, Max B.; Keshavan, Anisha; Larsen, Bart S.; Luna, Beatriz; Mackey, Allyson P.; Milham, Michael P.; Oathes, Desmond J.; Perrone, Anders; Pines, Adam R.; Roalf, David R.; Richie-Halford, Adam; Rokem, Ariel; Sydnor, Valerie J.; Tapera, Tinashe M.; Tooley, Ursula A.; Vettel, Jean M.; Yeatman, Jason D.; Grafton, Scott T.; Satterthwaite, Theodore D.

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The ANTsX ecosystem for quantitative biological and medical imaging

SCIENTIFIC REPORTS

IF3.9

2021-04-27

104

OAAI

Tustison, Nicholas J.; Cook, Philip A.; Holbrook, Andrew J.; Johnson, Hans J.; Muschelli, John; Devenyi, Gabriel A.; Duda, Jeffrey T.; Das, Sandhitsu R.; Cullen, Nicholas C.; Gillen, Daniel L.; Yassa, Michael A.; Stone, James R.; Gee, James C.; Avants, Brian B.

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Research Directions