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J

Jun Ding

mcgill university

51H指数
299论文数
1.2W被引数
收录论文 107
发表时间
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Spatial omics in the AI era: Technologies, algorithmic ecosystems, biological applications, and large model perspectives人工智能时代的空间组学: 技术、算法生态系统、生物应用和大模型视角
erriMeta
IF33.2
err2026-07-06
err0
errOAAI
errHaoxiu Wang; Xinwang Yang; Siheng Wang; Zhe Yang; Xiuhui Yang; Yutong Yang; Zirong Li; Yuqi Ren; Qianqian Zhang; Bowen Zhao; Jingming Xiao; Yidong Wang; Junhao Dong; Zhenhao Kou; Jie Li; Liqun Yang; Erhu Zhao; Gregory Fonseca; Ruibang Luo; Mingyu Yang; Hongjuan Cui; Gengjie Jia; Dan Wang; Haoyang Li; Jun Ding; Zhiyuan Yuan; Haojing Shao
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Dissecting and steering cell dynamics using spatially-informed RNA velocity with veloAgent使用空间信息RNA速度与veloAgent解析和调控细胞动态
errMolecular Systems Biology
IF7.7
err2026-05-06
err0
errOAAI
errVishvak Raghavan; Brent Yoon; Gregory J Fonseca; Yue Li; Jun Ding
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DENetwork unveils non-differentially expressed genes with functional relevance across conditions through information flow perturbationDENetwork通过信息流扰动揭示了具有跨条件功能相关性的非差异表达基因
errNUCLEIC ACIDS RESEARCH
IF13.1
err2025-12-11
err0
errOAAI
errZhao, Bowen; Su, Ting-Yi; Wang, Jingtao; Islam, Quazi S.; Song, Kailu; Huang, Steven K.; Allez, Matthieu; Fonseca, Gregory J.; Baglole, Carolyn J.; Ding, Jun
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SIDISH integrates single-cell and bulk transcriptomics to identify high-risk cells and guide precision therapeutics through in silico perturbationSIDISH集成了单细胞和批量转录组学，以识别高风险细胞并通过计算机干扰指导精确治疗
errNature Communications
IF15.7
err2025-12-10
err0
errOAAI
errYasmin Jolasun; Kailu Song; Yumin Zheng; Jingtao Wang; Gregory J. Fonseca; David H. Eidelman; Jun Ding
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scGALA advances graph link prediction-based cell alignment for comprehensive data integration and harmonizationscGALA通过基于图链接预测的细胞对齐，推进全面数据整合与协调。
errNature Communications
IF15.7
err2025-11-26
err0
errOAAI
errGuo Jiang; Kailu Song; Gregory J. Fonseca; Darcy E. Wagner; Iain C. Clark; Hui Wang; Jun Ding
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SerpinB9 sustains CIITA to orchestrate MHC-II expression and Th1 differentiation in β-glucan-induced macrophagesSerpinB9维持CIITA以调控MHC-II表达和Th1分化在β-葡聚糖诱导的巨噬细胞中
errImmunologic Research
IF3.1
err2025-10-29
err0
PREAI
errXin Huang; Jun Ding; Yongzhe Hao; Jie Pan; Meng Yuan; Fang Shao; Yewen Xie; Zhichao Zhu; Chunjian Qi
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err收藏
Computational tracking of cell origins using CellSexID from single-cell transcriptomes利用CellSexID从单细胞转录组中计算追踪细胞起源
errCell Reports Methods
IF4.5
err2025-09-17
err0
errOAAI
errHuilin Tai; Qian Li; Jingtao Wang; Jiahui Tan; Bowen Zhao; Ryann Lang; Basil J. Petrof; Jun Ding
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Inhibition of epithelial cell YAP-TEAD/LOX signaling attenuates pulmonary fibrosis in preclinical models抑制上皮细胞YAP-TEAD/LOX信号通路可减轻预临床模型中的肺纤维化
errNature Communications
IF15.7
err2025-08-02
err0
errOAAI
errDarcy Elizabeth Wagner; Hani N. Alsafadi; Nilay Mitash; Aurelien Justet; Qianjiang Hu; Ricardo Pineda; Claudia Staab-Weijnitz; Martina Korfei; Nika Gvazava; Kristin Wannemo; Ugochi Onwuka; Molly Mozurak; Adriana Estrada-Bernal; Juan Cala-Garcia; Katrin Mutze; Rita Costa; Deniz Bölükbas; John Stegmayr; Wioletta Skronska-Wasek; Stephan Klee; Chiharu Ota; Hoeke A. Baarsma; Jingtao Wang; John Sembrat; Anne Hilgendorff; Jun Ding; Andreas Günther; Rachel Chambers; Ivan Rosas; Stijn de Langhe; Naftali Kaminski; Mareike Lehmann; Oliver Eickelberg; Melanie Königshoff
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Biological responses during high-dose protein nutrition in the critically ill: a randomized controlled trial危重症患者高蛋白营养期间生物学反应：一项随机对照试验
errThe American Journal of Clinical Nutrition
IF0
err2025-06-26
err0
errOAAI
errArnold S Kristof; Mengyin Hong; Nadia Boufaied; Nihad Tousson-Abouelazm; Surya Dandamudi; Kwang-bo Joung; Roupen Hatzakorzian; Michelle Port; Giuseppina Campisi; Ciriaco A. Piccirillo; Gregory J Fonseca; Jun Ding; Daren K Heyland; David P Labbé; Linda Wykes; Thomas Schricker
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The specific hallmarks, emerging roles, key mechanisms, and clinical applications of intra-tumoral microbiota in human cancers肿瘤内微生物组的特定特征、新兴作用、关键机制及其在人类癌症中的临床应用
errGenes & Diseases
IF9.4
err2025-06-22
err0
errOAAI
errTingting Zhao; Na Sun; Jun Ding; Zaihui Peng; Fei Han; Xiaowei Qi
err分享
err收藏
A deep generative model for deciphering cellular dynamics and in silico drug discovery in complex diseases用于破译复杂疾病中的细胞动力学和计算机药物发现的深度生成模型
errNature Biomedical Engineering
IF26.6
err2025-06-20
err0
errOAAI
errYumin Zheng; Jonas C. Schupp; Taylor Adams; Geremy Clair; Aurelien Justet; Farida Ahangari; Xiting Yan; Paul Hansen; Marianne Carlon; Emanuela Cortesi; Marie Vermant; Robin Vos; Laurens J. De Sadeleer; Ivan O. Rosas; Ricardo Pineda; John Sembrat; Melanie Königshoff; John E. McDonough; Bart M. Vanaudenaerde; Wim A. Wuyts; Naftali Kaminski; Jun Ding
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scCobra allows contrastive cell embedding learning with domain adaptation for single cell data integration and harmonization
errCOMMUNICATIONS BIOLOGY
IF5.1
err2025-02-13
err0
errOAAI
errZhao, Bowen; Song, Kailu; Wei, Dong-Qing; Xiong, Yi; Ding, Jun
err分享
err收藏
β-Glucan induced plasma B cells differentiation to enhance antitumor immune responses by Dectin-1β-葡聚糖通过Dectin-1诱导血浆B细胞分化以增强抗肿瘤免疫反应
errBMC IMMUNOLOGY
IF2.7
err2025-01-10
err0
errOAAI
errBai, Yu; Ding, Jun; He, Liuyang; Zhu, Zhichao; Pan, Jie; Qi, Chunjian
err分享
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How do different categories of nature-related landscape images shape emotional experience?
errINTERNATIONAL JOURNAL OF PSYCHOLOGY
IF1.6
err2024-12-23
err0
PREAI
errGao, Cheng; Liu, Chang; Jiang, Luyao; Ding, Jun
err分享
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Transplantation of astrocyte-derived mitochondria into injured astrocytes has a protective effect following stretch injury
errMitochondrion
IF4.5
err2024-09-01
err1
errOAAI
errGong, Qiu-yuan; Wang, Wei; Cai, Lin; Jing, Yao; Yang, Dian-xu; Yuan, Fang; Tian, Heng-li; Ding, Jun; Chen, Hao; Xu, Zhi-ming
err分享
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scHiCyclePred: a deep learning framework for predicting cell cycle phases from single-cell Hi-C data using multi-scale interaction information
errCOMMUNICATIONS BIOLOGY
IF5.1
err2024-07-31
err1
errOAAI
errWu, Yingfu; Shi, Zhenqi; Zhou, Xiangfei; Zhang, Pengyu; Yang, Xiuhui; Ding, Jun; Wu, Hao
err分享
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scCross: a deep generative model for unifying single-cell multi-omics with seamless integration, cross-modal generation, and in silico exploration
errGENOME BIOLOGY
IF9.4
err2024-07-29
err2
errOAAI
errYang, Xiuhui; Mann, Koren K.; Wu, Hao; Ding, Jun
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scSemiProfiler: Advancing large-scale single-cell studies through semi-profiling with deep generative models and active learning
errNATURE COMMUNICATIONS
IF15.7
err2024-07-16
err1
errOAAI
errWang, Jingtao; Fonseca, Gregory J.; Ding, Jun
err分享
err收藏
Pathogenesis-Guided Rational Engineering of Nanotherapies for the Targeted Treatment of Abdominal Aortic Aneurysm by Inhibiting Neutrophilic Inflammation发病机制指导的合理工程纳米疗法通过抑制中性粒细胞炎症靶向治疗腹主动脉瘤
errACS NANO
IF16
err2024-02-19
err9
PREAI
errHu, Kaiyao; Zhong, Ling; Lin, Wenjie; Zhao, Guanli; Pu, Wendan; Feng, Zhiqiang; Zhou, Min; Ding, Jun; Zhang, Jianxiang
err分享
err收藏
BCG immunization induces CX3CR1hi effector memory T cells to provide cross-protection via IFN-γ-mediated trained immunity (Jan, 10.1038/s41590-023-01739-z, 2024)
errNATURE IMMUNOLOGY
IF27.6
err2024-02-01
err0
errOAAI
errTran, Kim A.; Pernet, Erwan; Sadeghi, Mina; Downey, Jeffrey; Chronopoulos, Julia; Lapshina, Elizabeth; Tsai, Oscar; Kaufmann, Eva; Ding, Jun; Divangahi, Maziar
err分享
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研究方向

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合作学者
合作期刊
刘欢 封面图
刘欢 (Huan Liu)
H 指数: 174 · 论文数: 3.8K
J
Jeffrey A. Whitsett
H 指数: 136 · 论文数: 759
D
Daren K. Heyland
H 指数: 124 · 论文数: 782
刘
刘颖 (Ying Liu)
H 指数: 118 · 论文数: 2.5K
D
Don D. Sin
H 指数: 114 · 论文数: 1.0K
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