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W

Wim Vranken

vrije universiteit brussel

47H指数
239论文数
1.4W被引数
收录论文 72
发表时间
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NanoSaurus: addressing the urgent need for open access in single-domain antibody researchNanoSaurus：应对单域抗体研究领域开放获取的迫切需求
errmAbs
IF7.3
err2026-09-28
err0
errOAAI
errP. Di Filippo; E. Pardon; R.J. Owens; F.I. Schmidt; C. Durinx; U. Rothbauer; H. Ploegh; M. A. Seeger; S. Muyldermans; W. Vranken; J. Steyaert
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Evolutionary constraints improve protein large language model predictions for protein stability, binding regions and epistasis进化约束提高了蛋白质大语言模型对蛋白质稳定性、结合区域和表型相互作用的预测
errComputational and Structural Biotechnology Journal
IF4.1
err2026-08-31
err0
errOAAI
errKonstantina Tzavella; Catharina Olsen; Wim F Vranken
err分享
err收藏
Assessing the relation between protein phosphorylation, AlphaFold3 models, and conformational variability
errPROTEIN SCIENCE
IF5.2
err2025-12-23
err0
errOAAI
errRamasamy, Pathmanaban; Zuallaert, Jasper; Martens, Lennart; Vranken, Wim F.
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Unlocking Health Data for Research: Legal, Technical, and Organisational Lessons from a Belgian Interdisciplinary Case Study解锁健康数据用于研究：来自比利时跨学科案例研究的法律、技术和组织经验教训
errJournal of Healthcare Informatics Research
IF3.7
err2025-10-23
err0
errOAAI
errAudrey Van Scharen; Karen Cruyt; Jeroen Colon; Selene De Sutter; Johnny Duerinck; Ramses Forsyth; Catharina Olsen; Paul Quinn; Konstantina Tzavella; Sonia Van Dooren; Wim Waelput; Arne Witdouck; Pieter Cornu; Jef Vandemeulebroucke; Wim Vranken
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Cryo-EM structures of the MnmE–MnmG complex reveal large conformational changes and provide new insights into the mechanism of tRNA modificationMnmE–MnmG复合物的冷冻电镜结构揭示了显著的结构变化，并为了解tRNA修饰机制提供了新的见解。
errNucleic Acids Research
IF13.1
err2025-08-30
err0
errOAAI
errLaila Maes; Israel Mares-Mejía; Ella Martin; David Bickel; Siemen Claeys; Wim Vranken; Marcus Fislage; Christian Galicia; Wim Versées
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Deciphering the RNA recognition by Musashi-1 to design protein and RNA variants for in vitro and in vivo applications阐明Musashi-1对RNA的识别机制，以设计用于体外和体内应用的蛋白质和RNA变体
errNUCLEIC ACIDS RESEARCH
IF13.1
err2025-08-28
err0
errOAAI
errPerez-Rafols, Anna; Perez-Ropero, Guillermo; Cerofolini, Linda; Sperotto, Luca; Roca-Martinez, Joel; Higuera-Rodriguez, R. Anahi; Russomanno, Pasquale; Kaiser, Wolfgang; Vranken, Wim; Danielson, U. Helena; Provenzani, Alessandro; Martelli, Tommaso; Sattler, Michael; Buijs, Jos; Fragai, Marco
err分享
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GPCRchimeraDB: A Database of Chimeric G Protein-Coupled Receptors (GPCRs) to Assist Their DesignGPCRchimeraDB：一个用于辅助设计嵌合G蛋白偶联受体（GPCRs）的数据库
errJOURNAL OF MOLECULAR BIOLOGY
IF4.5
err2025-07-01
err0
errOAAI
errCrauwels, Charlotte; Diaz, Adrian; Vranken, Wim
err分享
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In silico identification of archaeal DNA-binding proteins体外识别古菌DNA结合蛋白
errBIOINFORMATICS
IF5.4
err2025-05-02
err0
errOAAI
errDonvil, Linus; Housmans, Joelle A. J.; Peeters, Eveline; Vranken, Wim; Orlando, Gabriele
err分享
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Critical assessment of missense variant effect predictors on disease-relevant variant data
errHUMAN GENETICS
IF3.6
err2025-03-01
err1
errOAAI
errRastogi, Ruchir; Chung, Ryan; Li, Sindy; Li, Chang; Lee, Kyoungyeul; Woo, Junwoo; Kim, Dong-Wook; Keum, Changwon; Babbi, Giulia; Martelli, Pier Luigi; Savojardo, Castrense; Casadio, Rita; Chennen, Kirsley; Weber, Thomas; Poch, Olivier; Ancien, Francois; Cia, Gabriel; Pucci, Fabrizio; Raimondi, Daniele; Vranken, Wim; Rooman, Marianne; Marquet, Celine; Olenyi, Tobias; Rost, Burkhard; Andreoletti, Gaia; Kamandula, Akash; Peng, Yisu; Bakolitsa, Constantina; Mort, Matthew; Cooper, David N.; Bergquist, Timothy; Pejaver, Vikas; Liu, Xiaoming; Radivojac, Predrag; Brenner, Steven E.; Ioannidis, Nilah M.
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Combining evolution and protein language models for an interpretable cancer driver mutation prediction with D2Deep结合进化和蛋白质语言模型进行可解释的癌症驱动突变预测与D2Deep
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2024-12-21
err0
errOAAI
errTzavella, Konstantina; Diaz, Adrian; Olsen, Catharina; Vranken, Wim
err分享
err收藏
Data-driven probabilistic definition of the low energy conformational states of protein residues
errgenomics proteomics bioinformatics
IF2.8
err2024-07-09
err1
errOAAI
errGavalda-Garcia, Jose; Bickel, David; Roca-Martinez, Joel; Raimondi, Daniele; Orlando, Gabriele; Vranken, Wim
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err收藏
Effects of Phosphorylation on Protein Backbone Dynamics and Conformational Preferences
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2024-06-03
err3
errOAAI
errBickel, David; Vranken, Wim
err分享
err收藏
Repurposing the mammalian RNA-binding protein Musashi-1 as an allosteric translation repressor in bacteria
errELIFE
IF0
err2024-02-16
err2
errOAAI
errDolcemascolo, Roswitha; Heras-Hernandez, Maria; Goiriz, Lucas; Montagud-Martinez, Roser; Requena-Menendez, Alejandro; Ruiz, Raul; Perez-Rafols, Anna; Higuera-Rodriguez, R. Anahi; Perez-Ropero, Guillermo; Vranken, Wim F.; Martelli, Tommaso; Kaiser, Wolfgang; Buijs, Jos; Rodrigo, Guillermo
err分享
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Analysis of the inter-domain orientation of tandem RRM domains with diverse linkers: connecting experimental with AlphaFold2 predicted models具有不同接头的串联RRM域的域间方向分析: 将实验与AlphaFold2预测模型连接起来
errgenomics proteomics bioinformatics
IF2.8
err2024-01-29
err1
errOAAI
errRoca-Martinez, Joel; Kang, Hyun-Seo; Sattler, Michael; Vranken, Wim
err分享
err收藏
Conformational dynamics of α-1 acid glycoprotein (AGP) in cancer: A comparative study of glycosylated and unglycosylated AGP
errPROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
IF2.8
err2023-10-14
err2
PREAI
errDixit, Bhawna; Vranken, Wim; Ghysels, An
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err收藏
Minimum information guidelines for experiments structurally characterizing intrinsically disordered protein regions
errNATURE METHODS
IF32.1
err2023-07-03
err8
errOAAI
errMeszaros, Balint; Hatos, Andras; Palopoli, Nicolas; Quaglia, Federica; Salladini, Edoardo; Van Roey, Kim; Arthanari, Haribabu; Dosztanyi, Zsuzsanna; Felli, Isabella C.; Fischer, Patrick D.; Hoch, Jeffrey C.; Jeffries, Cy M.; Longhi, Sonia; Maiani, Emiliano; Orchard, Sandra; Pancsa, Rita; Papaleo, Elena; Pierattelli, Roberta; Piovesan, Damiano; Pritisanac, Iva; Tenorio, Luiggi; Viennet, Thibault; Tompa, Peter; Vranken, Wim; Tosatto, Silvio C. E.; Davey, Norman E.
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Massively parallel interrogation of protein fragment secretability using SECRiFY reveals features influencing secretory system transit (vol 12, 6414, 2021
errNATURE COMMUNICATIONS
IF15.7
err2023-02-24
err0
errOAAI
errBoone, Morgane; Ramasamy, Pathmanaban; Zuallaert, Jasper; Bouwmeester, Robbin; Van Moer, Berre; Maddelein, Davy; Turan, Demet; Hulstaert, Niels; Eeckhaut, Hannah; Vandermarliere, Elien; Martens, Lennart; Degroeve, Sven; De Neve, Wesley; Vranken, Wim; Callewaert, Nico
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Deep mutational scanning of essential bacterial proteins can guide antibiotic development (vol 14, 241, 2023)
errNATURE COMMUNICATIONS
IF15.7
err2023-02-06
err0
errOAAI
errDewachter, Liselot; Brooks, Aaron N.; Noon, Katherine; Cialek, Charlotte; Clark-ElSayed, Alia; Schalck, Thomas; Krishnamurthy, Nandini; Versees, Wim; Vranken, Wim; Michiels, Jan
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New simulation insights on the structural transition mechanism of bovine rhodopsin activation
errPROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
IF2.8
err2023-01-24
err0
errOAAI
errDamodaran, Kamalesh; Khan, Taushif; Bickel, David; Jaya, Sreeshma; Vranken, Wim F.; Sudandiradoss, Chinnappan
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err收藏
Deep mutational scanning of essential bacterial proteins can guide antibiotic development
errNATURE COMMUNICATIONS
IF15.7
err2023-01-16
err17
errOAAI
errDewachter, Liselot; Brooks, Aaron N. N.; Noon, Katherine; Cialek, Charlotte; Clark-ElSayed, Alia; Schalck, Thomas; Krishnamurthy, Nandini; Versees, Wim; Vranken, Wim; Michiels, Jan
err分享
err收藏

研究方向

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