未登录Toward an Integrated Machine Learning Model of a Proteomics Experiment
Neely, Benjamin A.; Dorfer, Viktoria; Martens, Lennart; Bludau, Isabell; Bouwmeester, Robbin; Degroeve, Sven; Deutsch, Eric W.; Gessulat, Siegfried; Kaell, Lukas; Palczynski, Pawel; Payne, Samuel H.; Rehfeldt, Tobias Greisager; Schmidt, Tobias; Schwaemmle, Veit; Uszkoreit, Julian; Vizcaino, Juan Antonio; Wilhelm, Mathias; Palmblad, Magnus .png)
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收藏Single-copy locus proteomics of early- and late- firing DNA replication origins identifies a role of Ask1/DASH complex in replication timing controlWeiss, Matthias; Chanou, Anna; Schauer, Tamas; Tvardovskiy, Andrey; Meiser, Stefan; Koenig, Ann-Christine; Schmidt, Tobias; Kruse, Elisabeth; Ummethum, Henning; Trauner, Manuel; Werner, Marcel; Lalonde, Maxime; Hauck, Stefanie M.; Scialdone, Antonio; Hamperl, Stephan 分享 收藏 ProteomicsML: An Online Platform for Community-Curated Data sets and Tutorials for Machine Learning in ProteomicsRehfeldt, Tobias G.; Gabriels, Ralf; Bouwmeester, Robbin; Gessulat, Siegfried; Neely, Benjamin A.; Palmblad, Magnus; Perez-Riverol, Yasset; Schmidt, Tobias; Vizcaino, Juan Antonio; Deutsch, Eric W. 分享 收藏 Mass spectrometry-based draft of the mouse proteomeGiansanti, Piero; Samaras, Patroklos; Bian, Yangyang; Meng, Chen; Coluccio, Andrea; Frejno, Martin; Jakubowsky, Hannah; Dobiasch, Sophie; Hazarika, Rashmi R.; Rechenberger, Julia; Calzada-Wack, Julia; Krumm, Johannes; Mueller, Sebastian; Lee, Chien-Yun; Wimberger, Nicole; Lautenbacher, Ludwig; Hassan, Zonera; Chang, Yun-Chien; Falcomata, Chiara; Bayer, Florian P.; Barthel, Stefanie; Schmidt, Tobias; Rad, Roland; Combs, Stephanie E.; The, Matthew; Johannes, Frank; Saur, Dieter; de Angelis, Martin Hrabe; Wilhelm, Mathias; Schneider, Guenter; Kuster, Bernhard 分享 收藏 ProteomicsDB: toward a FAIR open-source resource for life-science researchLautenbacher, Ludwig; Samaras, Patroklos; Muller, Julian; Grafberger, Andreas; Shraideh, Marwin; Rank, Johannes; Fuchs, Simon T.; Schmidt, Tobias K.; The, Matthew; Dallago, Christian; Wittges, Holger; Rost, Burkhard; Krcmar, Helmut; Kuster, Bernhard; Wilhelm, Mathias 分享 收藏 Deep learning boosts sensitivity of mass spectrometry-based immunopeptidomics (vol 12, 3346, 2021)Wilhelm, Mathias; Zolg, Daniel P.; Graber, Michael; Gessulat, Siegfried; Schmidt, Tobias; Schnatbaum, Karsten; Schwencke-Westphal, Celina; Seifert, Philipp; Kraetzig, Niklas de Andrade; Zerweck, Johannes; Knaute, Tobias; Braeunlein, Eva; Samaras, Patroklos; Lautenbacher, Ludwig; Klaeger, Susan; Wenschuh, Holger; Rad, Roland; Delanghe, Bernard; Huhmer, Andreas; Carr, Steven A.; Clauser, Karl R.; Krackhardt, Angela M.; Reimer, Ulf; Kuster, Bernhard 分享 收藏 Deep learning boosts sensitivity of mass spectrometry-based immunopeptidomics深度学习提高了基于质谱的免疫流行病学的灵敏度Wilhelm, Mathias; Zolg, Daniel P.; Graber, Michael; Gessulat, Siegfried; Schmidt, Tobias; Schnatbaum, Karsten; Schwencke-Westphal, Celina; Seifert, Philipp; de Andrade Kraetzig, Niklas; Zerweck, Johannes; Knaute, Tobias; Braeunlein, Eva; Samaras, Patroklos; Lautenbacher, Ludwig; Klaeger, Susan; Wenschuh, Holger; Rad, Roland; Delanghe, Bernard; Huhmer, Andreas; Carr, Steven A.; Clauser, Karl R.; Krackhardt, Angela M.; Reimer, Ulf; Kuster, Bernhard 分享 收藏 Universal Spectrum Explorer: A Standalone (Web-)Application for Cross-Resource Spectrum ComparisonSchmidt, Tobias; Samaras, Patroklos; Dorfer, Viktoria; Panse, Christian; Kockmann, Tobias; Bichmann, Leon; van Puyvelde, Bart; Perez-Riverol, Yasset; Deutsch, Eric W.; Kuster, Bernhard; Wilhelm, Mathias 分享 收藏 分享 收藏 ProteomicsDB: a multi-omics and multi-organism resource for life science researchProteomicsDB: 生命科学研究的多组学和多生物资源Samaras, Patroklos; Schmidt, Tobias; Frejno, Martin; Gessulat, Siegfried; Reinecke, Maria; Jarzab, Anna; Zecha, Jana; Mergner, Julia; Giansanti, Piero; Ehrlich, Hans-Christian; Aiche, Stephan; Rank, Johannes; Kienegger, Harald; Krcmar, Helmut; Kuster, Bernhard; Wilhelm, Mathias 分享 收藏 Prosit: proteome-wide prediction of peptide tandem mass spectra by deep learningProsit: 基于深度学习的肽串联质谱全蛋白质组预测Gessulat, Siegfried; Schmidt, Tobias; Zolg, Daniel Paul; Samaras, Patroklos; Schnatbaum, Karsten; Zerweck, Johannes; Knaute, Tobias; Rechenberger, Julia; Delanghe, Bernard; Huhmer, Andreas; Reimer, Ulf; Ehrlich, Hans-Christian; Aiche, Stephan; Kuster, Bernhard; Wilhelm, Mathias 分享 收藏 分享 收藏 A deep proteome and transcriptome abundance atlas of 29 healthy human tissues29种健康人体组织的深层蛋白质组和转录组丰度图谱Wang, Dongxue; Eraslan, Basak; Wieland, Thomas; Hallstrom, Bjorn; Hopf, Thomas; Zolg, Daniel Paul; Zecha, Jana; Asplund, Anna; Li, Li-hua; Meng, Chen; Frejno, Martin; Schmidt, Tobias; Schnatbaum, Karsten; Wilhelm, Mathias; Ponten, Frederik; Uhlen, Mathias; Gagneur, Julien; Hahne, Hannes; Kuster, Bernhard 分享 收藏 ProteomeTools: Systematic Characterization of 21 Post-translational Protein Modifications by Liquid Chromatography Tandem Mass Spectrometry (LC-MS/MS) Using Synthetic PeptidesZolg, Daniel Paul; Wilhelm, Mathias; Schmidt, Tobias; Medard, Guillaume; Zerweck, Johannes; Knaute, Tobias; Wenschuh, Holger; Reimer, Ulf; Schnatbaum, Karsten; Kuster, Bernhard 分享 收藏 Mining the Human Tissue Proteome for Protein Citrullination挖掘用于蛋白质瓜氨酸化的人体组织蛋白质组Lee, Chien-Yun; Wang, Dongxue; Wilhelm, Mathias; Zolg, Daniel P.; Schmidt, Tobias; Schnatbaum, Karsten; Reimer, Ulf; Ponten, Fredrik; Uhlen, Mathias; Hahne, Hannes; Kuster, Bernhard 分享 收藏 ProteomicsDBSchmidt, Tobias; Samaras, Patroklos; Frejno, Martin; Gessulat, Siegfried; Barnert, Maximilian; Kienegger, Harald; Krcmar, Helmut; Schlegl, Judith; Ehrlich, Hans-Christian; Aiche, Stephan; Kuster, Bernhard; Wilhelm, Mathias 分享 收藏 Building ProteomeTools based on a complete synthetic human proteomeZolg, Daniel P.; Wilhelm, Mathias; Schnatbaum, Karsten; Zerweck, Johannes; Knaute, Tobias; Delanghe, Bernard; Bailey, Derek J.; Gessulat, Siegfried; Ehrlich, Hans-Christian; Weininger, Maximilian; Yu, Peng; Schlegl, Judith; Kramer, Karl; Schmidt, Tobias; Kusebauch, Ulrike; Deutsch, Eric W.; Aebersold, Ruedi; Moritz, Robert L.; Wenschuh, Holger; Moehring, Thomas; Aiche, Stephan; Huhmer, Andreas; Reimer, Ulf; Kuster, Bernhard 分享 收藏 
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