Markus W. Covert - Publications, H-index & Citations

Markus W. Covert

Stanford University

44H指数

112论文数

1.2W被引数

收录论文 45

发表时间

Viruses in multi-scale ocean models: challenges and opportunities 多尺度海洋模型中的病毒：挑战与机遇

Frontiers in Marine Science

IF3

2025-12-12

OAAI

David Talmy; Cristina Howard-Varona; Damien Eveillard; Markus Covert; Matthew B. Sullivan

Integrating multiplexed imaging and multiscale modeling identifies tumor phenotype conversion as a critical component of therapeutic T cell efficacy

CELL SYSTEMS

IF7.7

2024-04-01

OAAI

Hickey, John W.; Agmon, Eran; Horowitz, Nina; Tan, Tze-Kai; Lamore, Matthew; Sunwoo, John B.; Covert, Markus W.; Nolan, Garry P.

Cross-evaluation of E. coli 's operon structures via a whole-cell model suggests alternative cellular benefits for low- versus high-expressing operons

CELL SYSTEMS

IF7.7

2024-03-01

PREAI

Sun, Gwanggyu; Defelice, Mialy M.; Gillies, Taryn E.; Ahn-Horst, Travis A.; Andrews, Cecelia J.; Krummenacker, Markus; Karp, Peter D.; Morrison, Jerry H.; Covert, Markus W.

Context-dependent regulation of lipid accumulation in adipocytes by a HIF1α-PPARγ feedback network

CELL SYSTEMS

IF7.7

2023-12-01

PREAI

Kudo, Takamasa; Zhao, Michael L.; Jeknic, Stevan; Kovary, Kyle M.; Lagory, Edward L.; Covert, Markus W.; Teruel, Mary N.

T cell-mediated curation and restructuring of tumor tissue coordinates an effective immune response

CELL REPORTS

IF6.9

2023-12-01

OAAI

Hickey, John W.; Haist, Maximillian; Horowitz, Nina; Caraccio, Chiara; Tan, Yuqi; Rech, Andrew J.; Baertsch, Marc-Andrea; Rovira-Clave, Xavier; Zhu, Bokai; Vazquez, Gustavo; Barlow, Graham; Agmon, Eran; Goltsev, Yury; Sunwoo, John B.; Covert, Markus; Nolan, Garry P.

Whole-cell modeling of E. coli confirms that in vitro tRNA aminoacylation measurements are insufficient to support cell growth and predicts a positive feedback mechanism regulating arginine biosynthesis

NUCLEIC ACIDS RESEARCH

IF13.1

2023-05-24

OAAI

Choi, Heejo; Covert, Markus W.

An optimized reporter of the transcription factor hypoxia- inducible factor 1α reveals complex HIF-1α activation dynamics in single cells

JOURNAL OF BIOLOGICAL CHEMISTRY

IF3.9

2023-04-01

OAAI

Jeknic, Stevan; Kudo, Takamasa; Song, Joanna J.; Covert, Markus W.

An expanded whole-cell model of E. coli links cellular physiology with mechanisms of growth rate control 大肠杆菌的扩展全细胞模型将细胞生理学与生长速率控制机制联系起来

NPJ SYSTEMS BIOLOGY AND APPLICATIONS

IF3.5

2022-08-19

OAAI

Ahn-Horst, Travis A.; Mille, Luis Santiago; Sun, Gwanggyu; Morrison, Jerry H.; Covert, Markus W.

A multiplexed epitope barcoding strategy that enables dynamic cellular phenotypic screens

CELL SYSTEMS

IF7.7

2022-05-01

OAAI

Kudo, Takamasa; Lane, Keara; Covert, Markus W.

A forecast for large-scale, predictive biology: Lessons from meteorology

CELL SYSTEMS

IF7.7

2021-06-01

OAAI

Covert, Markus W.; Gillies, Taryn E.; Kudo, Takamasa; Agmon, Eran

The Enemy of My Enemy: New Insights Regarding Bacteriophage-Mammalian Cell Interactions

TRENDS IN MICROBIOLOGY

IF14.9

2021-06-01

PREAI

Bodner, Katie; Melkonian, Arin L.; Covert, Markus W.

Stress-mediated exit to quiescence restricted by increasing persistence in CDK4/6 activation

ELIFE

IF0

2020-04-07

OAAI

Yang, Hee Won; Cappell, Steven D.; Jaimovich, Ariel; Liu, Chad; Chung, Mingyu; Daigh, Leighton H.; Pack, Lindsey R.; Fan, Yilin; Regot, Sergi; Covert, Markus; Meyer, Tobias

Engineered Fluorescent E. coli Lysogens Allow Live-Cell Imaging of Functional Prophage Induction Triggered inside Macrophages

CELL SYSTEMS

IF7.7

2020-03-01

OAAI

Bodner, Katie; Melkonian, Arin L.; Barth, Angela I. M.; Kudo, Takamasa; Tanouchi, Yu; Covert, Markus W.

Deep learning for cellular image analysis 用于细胞图像分析的深度学习

NATURE METHODS

IF32.1

2019-05-27

721

OAAI

Moen, Erick; Bannon, Dylan; Kudo, Takamasa; Graf, William; Covert, Markus; Van Valen, David

NF-κB signaling dynamics is controlled by a dose-sensing autoregulatory loop

SCIENCE SIGNALING

IF6.6

2019-04-30

OAAI

DeFelice, Mialy M.; Clark, Helen R.; Hughey, Jacob J.; Maayan, Inbal; Kudo, Takamasa; Gutschow, Miriam V.; Covert, Markus W.; Regot, Sergi

Techniques for Studying Decoding of Single Cell Dynamics

FRONTIERS IN IMMUNOLOGY

IF5.9

2019-04-11

OAAI

Jeknic, Stevan; Kudo, Takamasa; Covert, Markus W.

Escalating Threat Levels of Bacterial Infection Can Be Discriminated by Distinct MAPK and NF-κB Signaling Dynamics in Single Host Cells

CELL SYSTEMS

IF7.7

2019-03-01

OAAI

Lane, Keara; Andres-Terre, Marta; Kudo, Takamasa; Monack, Denise M.; Covert, Markus W.

Simultaneous Cross-Evaluation of Heterogeneous E. coli Datasets via Mechanistic Simulation

BIOPHYSICAL JOURNAL

IF3.1

2019-02-01

PREAI

Covert, Markus

Combinatorial processing of bacterial and host-derived innate immune stimuli at the single-cell level

MOLECULAR BIOLOGY OF THE CELL

IF2.7

2019-01-15

OAAI

Gutschow, Miriam V.; Mason, John C.; Lane, Keara M.; Maayan, Inbal; Hughey, Jacob J.; Bajar, Bryce T.; Amatya, Debha N.; Valle, Sean D.; Covert, Markus W.

Live-cell measurements of kinase activity in single cells using translocation reporters 使用易位报告物对单细胞中激酶活性的活细胞测量

NATURE PROTOCOLS

IF16

2017-12-21

PREAI

Kudo, Takamasa; Jeknic, Stevan; Macklin, Derek N.; Akhter, Sajia; Hughey, Jacob J.; Regot, Sergi; Covert, Markus W.

研究方向