Andrea M. Chiariello - Publications, H-index & Citations

Andrea M. Chiariello

università degli studi di napoli federico ii

25H指数

98论文数

3.4K被引数

收录论文 40

发表时间

Comparative modelling of large-scale 3D genome re-arrangements in different viral infections 不同病毒感染中大规模3D基因组重排的对比建模

npj Systems Biology and Applications

IF3.5

2026-09-04

OAAI

Andrea Fontana; Simona Bianco; Andrea Esposito; Andrea M. Chiariello

Phase separation of ecDNA condensates establishes in-trans contact domains that boost selective MYC regulatory interactions 共价闭合环状DNA凝聚体的相分离建立了可增强选择性MYC调控相互作用的转接触域

Nature Communications

IF15.7

2026-08-05

OAAI

Mattia Conte; Lana Al Hasani; Tommaso Matteuzzi; Andrea Esposito; Sumanta Kundu; Andrea M. Chiariello; Simona Bianco; Francesca Vercellone; Wenbo Li; Mario Nicodemi

Deciphering viral action on host genome structure: a computational physics perspective 解析病毒对宿主基因组结构的作用：计算物理学视角

Biochimica et Biophysica Acta-Molecular Basis of Disease

IF4.2

2026-08-04

OAAI

Andrea Fontana; Andrea M. Chiariello

Physics-Based Modeling of Sparse Single-Cell Hi-C Uncovers Structural and Epigenetic Variability 基于物理的稀疏单细胞Hi-C建模揭示了结构和表观遗传变异性

International Journal of Molecular Sciences

IF4.9

2026-05-30

OAAI

Francesca Vercellone; Sumanta Kundu; Andrea Esposito; Andrea M. Chiariello; Mattia Conte; Alex Abraham; Andrea Fontana; Florinda Di Pierno; Sougata Guha; Ciro Di Carluccio; Matteo Olimpo; Mario Nicodemi; Francesco Paolo Casale; Simona Bianco

Emergent domain segregation in self-interacting polymers explains chromosome 3D conformations in single human cells 自相互作用聚合物中的突发域分离解释了单个人类细胞中的染色体三维构型

Physical Review E

IF2.4

2026-05-01

PREAI

Conte, Mattia; Bianco, Simona; Guha, Sougata; Chiariello, Andrea M.; Esposito, Andrea; Abraham, Alex; Kundu, Sumanta; Vercellone, Francesca; Fontana, Andrea; Di Pierno, Florinda; Di Carluccio, Ciro; Olimpo, Matteo; Nicodemi, Mario

An integrated view of the structure and function of the human 4D nucleome 人类4D核体结构与功能的综合视图

Nature

IF48.5

2025-12-17

OAAI

Job Dekker; Betul Akgol Oksuz; Yang Zhang; Ye Wang; Miriam K. Minsk; Shuzhen Kuang; Liyan Yang; Johan H. Gibcus; Nils Krietenstein; Oliver J. Rando; Jie Xu; Derek H. Janssens; Steven Henikoff; Alexander Kukalev; Willemin Andréa; Warren Winick-Ng; Rieke Kempfer; Ana Pombo; Miao Yu; Pradeep Kumar; Liguo Zhang; Andrew S. Belmont; Takayo Sasaki; Tom van Schaik; Laura Brueckner; Daan Peric-Hupkes; Bas van Steensel; Ping Wang; Haoxi Chai; Minji Kim; Yijun Ruan; Ran Zhang; Sofia A. Quinodoz; Prashant Bhat; Mitchell Guttman; Wenxin Zhao; Shu Chien; Yuan Liu; Sergey V. Venev; Dariusz Plewczynski; Ibai Irastorza Azcarate; Dominik Szabó; Christoph J. Thieme; Teresa Szczepińska; Mateusz Chiliński; Kaustav Sengupta; Mattia Conte; Andrea Esposito; Alex Abraham; Ruochi Zhang; Yuchuan Wang; Xingzhao Wen; Qiuyang Wu; Yang Yang; Jie Liu; Lorenzo Boninsegna; Asli Yildirim; Yuxiang Zhan; Andrea Maria Chiariello; Simona Bianco; Lindsay Lee; Ming Hu; Yun Li; R. Jordan Barnett; Ashley L. Cook; Daniel J. Emerson; Claire Marchal; Peiyao Zhao; Peter J. Park; Burak H. Alver; Andrew J. Schroeder; Rahi Navelkar; Clara Bakker; William Ronchetti; Shannon Ehmsen; Alexander D. Veit; Nils Gehlenborg; Ting Wang; Daofeng Li; Xiaotao Wang; Mario Nicodemi; Bing Ren; Sheng Zhong; Jennifer E. Phillips-Cremins; David M. Gilbert; Katherine S. Pollard; Frank Alber; Jian Ma; William S. Noble; Feng Yue

Modelling phase-separation: A physical mechanism to control genome folding and gene regulation 模拟相分离：一种控制基因组折叠和基因调控的物理机制

Physica A: Statistical Mechanics and its Applications

IF3.1

2025-11-17

OAAI

Andrea Fontana; Federico Corberi; Mario Salerno; Andrea M. Chiariello

Differential oligomerization regulates PHF13 chromatin affinity and function 差异寡聚化调控PHF13的染色质亲和力与功能

NUCLEIC ACIDS RESEARCH

IF13.1

2025-07-08

OAAI

Rossi, Francesca; Magalhaes, Alexandre P.; Buschow, Rene; Schubert, Tobias; Glaser, Laura; Fontana, Andrea; Mai, Julia; Staege, Hannah; Grimme, Astrid; Will, Hans; Schriener, Sabrina; Hnisz, Denes; Vingron, Martin; Chiariello, Andrea M.; Kinkley, Sarah

Polymer models of chromatin organization in virally infected cells

BIOCHEMICAL SOCIETY TRANSACTIONS

IF4.3

2025-02-07

PREAI

Fontana, Andrea; Tafuri, Fabrizio; Abraham, Alex; Bianco, Simona; Esposito, Andrea; Conte, Mattia; Vercellone, Francesca; Di Pierno, Florinda; Guha, Sougata; Di Carluccio, Ciro; Chiariello, Andrea M.

Loss of structural specificity in 3D genome organization upon viral infection is predicted by polymer physics

JOURNAL OF CHEMICAL PHYSICS

IF3.1

2025-01-02

PREAI

Fontana, Andrea; Bianco, Simona; Tafuri, Fabrizio; Esposito, Andrea; Abraham, Alex; Conte, Mattia; Vercellone, Francesca; Di Pierno, Florinda; Kundu, Sumanta; Guha, Sougata; Di Carluccio, Ciro; Prisco, Antonella; Nicodemi, Mario; Chiariello, Andrea M.

A Multiscale Perspective on Chromatin Architecture through Polymer Physics 通过聚合物物理学对染色质结构的跨尺度视角

PHYSIOLOGY

IF10.3

2024-11-27

PREAI

Vercellone, Francesca; Chiariello, Andrea M.; Conte, Mattia; Abraham, Alex; Fontana, Andrea; Di Pierno, Florinda; Tafuri, Fabrizio; Guha, Sougata; Kundu, Sumanta; Di Carluccio, Ciro; Bianco, Simona

Multiscale modelling of chromatin 4D organization in SARS-CoV-2 infected cells

NATURE COMMUNICATIONS

IF15.7

2024-05-13

OAAI

Chiariello, Andrea M.; Abraham, Alex; Bianco, Simona; Esposito, Andrea; Fontana, Andrea; Vercellone, Francesca; Conte, Mattia; Nicodemi, Mario

Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C

NATURE METHODS

IF32.1

2023-06-19

OAAI

Beagrie, Robert A. A.; Thieme, Christoph J. J.; Annunziatella, Carlo; Baugher, Catherine; Zhang, Yingnan; Schueler, Markus; Kukalev, Alexander; Kempfer, Rieke; Chiariello, Andrea M. M.; Bianco, Simona; Li, Yichao; Davis, Trenton; Scialdone, Antonio; Welch, Lonnie R. R.; Nicodemi, Mario; Pombo, Ana

Loop-extrusion and polymer phase-separation can co-exist at the single-molecule level to shape chromatin folding

NATURE COMMUNICATIONS

IF15.7

2022-07-13

OAAI

Conte, Mattia; Irani, Ehsan; Chiariello, Andrea M.; Abraham, Alex; Bianco, Simona; Esposito, Andrea; Nicodemi, Mario

3DGenBench: a web-server to benchmark computational models for 3D Genomics

NUCLEIC ACIDS RESEARCH

IF13.1

2022-05-25

OAAI

Belokopytova, Polina; Viesna, Emil; Chilinski, Mateusz; Qi, Yifeng; Salari, Hossein; Di Stefano, Marco; Esposito, Andrea; Conte, Mattia; Chiariello, Andrea M.; Teif, Vladimir B.; Plewczynski, Dariusz; Zhang, Bin; Jost, Daniel; Fishman, Veniamin

8-oxodG accumulation within super-enhancers marks fragile CTCF-mediated chromatin loops

NUCLEIC ACIDS RESEARCH

IF13.1

2022-03-02

OAAI

Scala, Giovanni; Gorini, Francesca; Ambrosio, Susanna; Chiariello, Andrea M.; Nicodemi, Mario; Lania, Luigi; Majello, Barbara; Amente, Stefano

Polymer physics reveals a combinatorial code linking 3D chromatin architecture to 1D chromatin states

CELL REPORTS

IF6.9

2022-03-01

OAAI

Esposito, Andrea; Bianco, Simona; Chiariello, Andrea M.; Abraham, Alex; Fiorillo, Luca; Conte, Mattia; Campanile, Raffaele; Nicodemi, Mario

A novel complex genomic rearrangement affecting the KCNJ2 regulatory region causes a variant of Cooks syndrome

HUMAN GENETICS

IF3.6

2021-11-25

PREAI

Cinque, Luigia; Micale, Lucia; Manara, Elena; Esposito, Andrea; Palumbo, Orazio; Chiariello, Andrea Maria; Bianco, Simona; Guerri, Giulia; Bertelli, Matteo; Giuffrida, Maria Grazia; Bernardini, Laura; Notarangelo, Angelantonio; Nicodemi, Mario; Castori, Marco

Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin (vol 18, pg 482, 2021)

NATURE METHODS

IF32.1

2021-09-03

OAAI

Fiorillo, Luca; Musella, Francesco; Conte, Mattia; Kempfer, Rieke; Chiariello, Andrea M.; Bianco, Simona; Kukalev, Alexander; Irastorza-Azcarate, Ibai; Esposito, Andrea; Abraham, Alex; Prisco, Antonella; Pombo, Ana; Nicodemi, Mario

Polymer models are a versatile tool to study chromatin 3D organization

BIOCHEMICAL SOCIETY TRANSACTIONS

IF4.3

2021-07-20

PREAI

Esposito, Andrea; Bianco, Simona; Fiorillo, Luca; Conte, Mattia; Abraham, Alex; Musella, Francesco; Nicodemi, Mario; Prisco, Antonella; Chiariello, Andrea M.

研究方向