Karin Hrovatin - Publications, H-index & Citations

Karin Hrovatin

Helmholtz Center Munich

12H指数

30论文数

698被引数

收录论文 12

发表时间

Pertpy: an end-to-end framework for perturbation analysis Pertpy：一个用于扰动分析的全流程框架

Nature Methods

IF32.1

2025-12-31

OAAI

Lukas Heumos; Yuge Ji; Lilly May; Tessa D. Green; Stefan Peidli; Xinyue Zhang; Xichen Wu; Johannes Ostner; Antonia Schumacher; Karin Hrovatin; Michaela Müller; Faye Chong; Gregor Sturm; Alejandro Tejada; Emma Dann; Mingze Dong; Gonçalo Pinto; Mojtaba Bahrami; Ilan Gold; Sergei Rybakov; Altana Namsaraeva; Amir Ali Moinfar; Zihe Zheng; Eljas Roellin; Isra Mekki; Chris Sander; Mohammad Lotfollahi; Herbert B. Schiller; Fabian J. Theis

Integrating single-cell RNA-seq datasets with substantial batch effects 整合具有显著批次效应的单细胞RNA-seq数据集

BMC Genomics

IF3.7

2025-10-31

OAAI

Karin Hrovatin; Amir Ali Moinfar; Luke Zappia; Shrey Parikh; Alejandro Tejada Lapuerta; Ben Lengerich; Manolis Kellis; Fabian J. Theis

A multimodal cross-species comparison of pancreas development 胰腺发育的多模态跨物种比较

Nature Communications

IF15.7

2025-10-22

OAAI

Kaiyuan Yang; Hannah Spitzer; Michael Sterr; Karin Hrovatin; Sean de la O; Xinghao Zhang; Eunike Sawitning Ayu Setyono; Minhaz Ud-Dean; Thomas Walzthoeni; Krzysztof Flisikowski; Tatiana Flisikowska; Angelika Schnieke; Katharina Scheibner; James M. Wells; Julie B. Sneddon; Barbara Kessler; Eckhard Wolf; Elisabeth Kemter; Fabian J. Theis; Heiko Lickert

BayBE: a Bayesian Back End for experimental planning in the low-to-no-data regime BayBE：一种用于低至零数据环境下实验规划的贝叶斯后端

DIGITAL DISCOVERY

IF5.6

2025-01-01

OAAI

Fitzner, Martin; Sosic, Adrian; Hopp, Alexander V.; Mueller, Marcel; Rihana, Rim; Hrovatin, Karin; Liebig, Fabian; Winkel, Mathias; Halter, Wolfgang; Brandenburg, Jan Gerit

Considerations for building and using integrated single-cell atlases

NATURE METHODS

IF32.1

2024-12-13

PREAI

Hrovatin, Karin; Sikkema, Lisa; Shitov, Vladimir A.; Heimberg, Graham; Shulman, Maiia; Oliver, Amanda J.; Mueller, Michaela F.; Ibarra, Ignacio L.; Wang, Hanchen; Ramirez-Suastegui, Ciro; He, Peng; Schaar, Anna C.; Teichmann, Sarah A.; Theis, Fabian J.; Luecken, Malte D.

Transformers in single-cell omics: a review and new perspectives 单细胞组学中的变压器: 回顾和新观点

NATURE METHODS

IF32.1

2024-08-09

PREAI

Szalata, Artur; Hrovatin, Karin; Becker, Soeren; Tejada-Lapuerta, Alejandro; Cui, Haotian; Wang, Bo; Theis, Fabian J.

Delineating mouse β-cell identity during lifetime and in diabetes with a single cell atlas

NATURE METABOLISM

IF20.8

2023-09-11

OAAI

Hrovatin, Karin; Bastidas-Ponce, Aimee; Bakhti, Mostafa; Zappia, Luke; Buettner, Maren; Salinno, Ciro; Sterr, Michael; Boettcher, Anika; Migliorini, Adriana; Lickert, Heiko; Theis, Fabian J.

Biologically informed deep learning to query gene programs in single-cell atlases 生物学信息深度学习在单细胞图谱中查询基因程序

NATURE CELL BIOLOGY

IF19.1

2023-02-02

OAAI

Lotfollahi, Mohammad; Rybakov, Sergei; Hrovatin, Karin; Hediyeh-zadeh, Soroor; Talavera-Lopez, Carlos; Misharin, Alexander V.; Theis, Fabian J.

Toward modeling metabolic state from single-cell transcriptomics 从单细胞转录组学建模代谢状态

MOLECULAR METABOLISM

IF6.6

2022-03-01

OAAI

Hrovatin, Karin; Fischer, David S.; Theis, Fabian J.