Sushmita Roy - Publications, H-index & Citations

Sushmita Roy

school of medicine and public health

49H指数

268论文数

1.1W被引数

收录论文 73

发表时间

Defining the role of β-cell IRE1α/XBP1 pathway and its gene regulatory network components in non-obese diabetic mice 定义β细胞IRE1α/XBP1通路及其基因调控网络成分在非肥胖糖尿病小鼠中的作用

Nature Communications

IF15.7

2025-11-26

OAAI

Hugo Lee; Khagani Eynullazada; Qiaodan Ou; Junha Shin; Sushmita Roy; Feyza Engin

Examining the dynamics of three-dimensional genome organization with multitask matrix factorization 使用多任务矩阵分解研究三维基因组组织的动力学

GENOME RESEARCH

IF5.5

2025-03-20

OAAI

Lee, Da-Inn; Roy, Sushmita

Rewiring of the 3D genome during acquisition of carboplatin resistance in a triple-negative breast cancer patient-derived xenograft (vol 13, 5420, 2023)

SCIENTIFIC REPORTS

IF3.9

2024-12-17

OAAI

Dozmorov, Mikhail G.; Marshall, Maggie A.; Rashid, Narmeen S.; Grible, Jacqueline M.; Valentine, Aaron; Olex, Amy L.; Murthy, Kavita; Chakraborty, Abhijit; Reyna, Joaquin; Figueroa, Daniela Salgado; Hinojosa-Gonzalez, Laura; Lee, Erika Da-Inn; Baur, Brittany A.; Roy, Sushmita; Ay, Ferhat; Harrell, J. Chuck

The single-cell transcriptome program of nodule development cellular lineages in Medicago truncatula

CELL REPORTS

IF6.9

2024-02-01

OAAI

Pereira, Wendell J.; Boyd, Jade; Conde, Daniel; Triozzi, Paolo M.; Balmant, Kelly M.; Dervinis, Christopher; Schmidt, Henry W.; Boaventura-Novaes, Carolina; Chakraborty, Sanhita; Knaack, Sara A.; Gao, Yueyao; Feltus, Frank Alexander; Roy, Sushmita; Ane, Jean-Michel; Frugoli, Julia; Kirst, Matias

Human left ventricular cardiac fibroblasts undergo a dynamic shift in secretome and gene expression toward a cardiac myofibroblast phenotype during early passage in typical culture expansion conditions

CYTOTHERAPY

IF3.2

2024-01-01

PREAI

Schmuck, Eric G.; Roy, Sushmita; Zhou, Tianhua; Wille, Delani; Reeves, Sophie Mixon; Conklin, James; Raval, Amish N.

Predicting patient-specific enhancer-promoter interactions

CELL REPORTS METHODS

IF4.5

2023-09-01

OAAI

Baur, Brittany; Roy, Sushmita

Inference of cell type-specific gene regulatory networks on cell lineages from single cell omic datasets 从单细胞组学数据集推断细胞类型特异性基因调控网络对细胞谱系的影响

NATURE COMMUNICATIONS

IF15.7

2023-05-27

OAAI

Zhang, Shilu; Pyne, Saptarshi; Pietrzak, Stefan; Halberg, Spencer; McCalla, Sunnie Grace; Siahpirani, Alireza Fotuhi; Sridharan, Rupa; Roy, Sushmita

Rewiring of the 3D genome during acquisition of carboplatin resistance in a triple-negative breast cancer patient-derived xenograft (vol 13, 5420, 2023)

SCIENTIFIC REPORTS

IF3.9

2023-05-09

OAAI

Dozmorov, Mikhail G.; Marshall, Maggie A.; Rashid, Narmeen S.; Grible, Jacqueline M.; Valentine, Aaron; Olex, Amy L.; Murthy, Kavita; Chakraborty, Abhijit; Reyna, Joaquin; Figueroa, Daniela Salgado; Hinojosa-Gonzalez, Laura; Da-Inn Lee, Erika; Baur, Brittany A.; Roy, Sushmita; Ay, Ferhat; Harrell, J. Chuck

Rewiring of the 3D genome during acquisition of carboplatin resistance in a triple-negative breast cancer patient-derived xenograft

SCIENTIFIC REPORTS

IF3.9

2023-04-03

OAAI

Dozmorov, Mikhail G.; Marshall, Maggie A.; Rashid, Narmeen S.; Grible, Jacqueline M.; Valentine, Aaron; Olex, Amy L.; Murthy, Kavita; Chakraborty, Abhijit; Reyna, Joaquin; Figueroa, Daniela Salgado; Hinojosa-Gonzalez, Laura; Da-Inn Lee, Erika; Baur, Brittany A.; Roy, Sushmita; Ay, Ferhat; Harrell, J. Chuck

Carboplatin resistance-associated changes in the 3D chromatin landscape of a triple-negative breast cancer Patient-Derived Xenograft

CANCER RESEARCH

IF16.6

2023-03-01

PREAI

Dozmorov, Mikhail; Marshall, Maggie; Rashid, Narmeen; Grible, Jacqueline; Valentine, Aaron D.; Olex, Amy; Murthy, Kavita; Chakraborty, Abhijit; Reyna, Joaquin; Figueroa, Daniela Salgado; Lee, Da-Inn; Baur, Brittany; Roy, Sushmita; Ay, Ferhat; Harrell, Chuck

Protective effects of dietary grape against atopic dermatitis-like skin lesions in NC/NgaTndCrlj mice

FRONTIERS IN IMMUNOLOGY

IF5.9

2023-01-19

OAAI

Singh, Chandra K. K.; Mintie, Charlotte A. A.; Ndiaye, Mary A. A.; Chhabra, Gagan; Roy, Sushmita; Sullivan, Ruth; Longley, B. Jack; Schieke, Stefan M. M.; Ahmad, Nihal

Intracerebroventricular dosing of N-sulfoglucosamine sulfohydrolase in mucopolysaccharidosis IIIA mice reduces markers of brain lysosomal dysfunction

JOURNAL OF BIOLOGICAL CHEMISTRY

IF3.9

2022-12-01

OAAI

Magat, Jenna; Jones, Samantha; Baridon, Brian; Agrawal, Vishal; Wong, Hio; Giaramita, Alexander; Mangini, Linley; Handyside, Britta; Vitelli, Catherine; Parker, Monica; Yeung, Natasha; Zhou, Yu; Pungor, Erno; Slabodkin, Ilya; Gorostiza, Olivia; Aguilera, Allora; Lo, Melanie J.; Alcozie, Saida; Christianson, Terri M.; Tiger, Pascale M. N.; Vincelette, Jon; Fong, Sylvia; Gil, Geuncheol; Hague, Chuck; Lawrence, Roger; Wendt, Daniel J.; Lebowitz, Jonathan H.; Bunting, Stuart; Bullens, Sherry; Crawford, Brett E.; Roy, Sushmita M.; Woloszynek, Josh C.

Modular derivation of diverse, regionally discrete human posterior CNS neurons enables discovery of transcriptomic patterns

SCIENCE ADVANCES

IF12.5

2022-09-30

OAAI

Iyer, Nisha R.; Shin, Junha; Cuskey, Stephanie; Tian, Yucheng; Nicol, Noah R.; Doersch, Tessa E.; Seipel, Frank; McCalla, Sunnie Grace; Roy, Sushmita; Ashton, Randolph S.

An LCO-responsive homolog of NODULE INCEPTION positively regulates lateral root formation in Populus sp.

PLANT PHYSIOLOGY

IF6.9

2022-08-04

OAAI

Irving, Thomas B.; Chakraborty, Sanhita; Maia, Lucas Gontijo Silva; Knaack, Sara; Conde, Daniel; Schmidt, Henry W.; Triozzi, Paolo M.; Simmons, Carl H.; Roy, Sushmita; Kirst, Matias; Ane, Jean-Michel

Evolution of miRNA-Binding Sites and Regulatory Networks in Cichlids

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2022-06-24

OAAI

Mehta, Tarang K.; Penso-Dolfin, Luca; Nash, Will; Roy, Sushmita; Di-Palma, Federica; Haerty, Wilfried

Dynamic regulatory module networks for inference of cell type-specific transcriptional networks

GENOME RESEARCH

IF5.5

2022-06-15

OAAI

Siahpirani, Alireza Fotuhi; Knaack, Sara; Chasman, Deborah; Seirup, Morten; Sridharan, Rupa; Stewart, Ron; Thomson, James; Roy, Sushmita

Tumor mutational profiles of extreme long-term survivors with metastatic breast cancer

CANCER RESEARCH

IF16.6

2022-02-15

PREAI

Hu, Yang; Shin, Junha; Roy, Sushmita; Burkard, Mark E.

GRiNCH: simultaneous smoothing and detection of topological units of genome organization from sparse chromatin contact count matrices with matrix factorization

GENOME BIOLOGY

IF9.4

2021-05-25

OAAI

Lee, Da-Inn; Roy, Sushmita

Transcriptome-wide transmission disequilibrium analysis identifies novel risk genes for autism spectrum disorder

PLOS GENETICS

IF3.7

2021-02-04

OAAI

Huang, Kunling; Wu, Yuchang; Shin, Junha; Zheng, Ye; Siahpirani, Alireza Fotuhi; Lin, Yupei; Ni, Zheng; Chen, Jiawen; You, Jing; Keles, Sunduz; Wang, Daifeng; Roy, Sushmita; Lu, Qiongshi

Cultured cardiac fibroblasts and myofibroblasts express Sushi Containing Domain 2 and assemble a unique fibronectin rich matrix

EXPERIMENTAL CELL RESEARCH

IF3.5

2021-02-01

PREAI

Schmuck, Eric G.; Roy, Sushmita; Dhillon, Anisa; Walker, Sydney; Spinali, Keith; Colevas, Sophia; Zhou, Tianhua; Chhabra, Gagan; Liu, Yuming; Sagar, Abdul Kader; Childs, Charlie J.; Kink, John A.; Eliceiri, Kevin W.; Hematti, Peiman; Raval, Amish N.

研究方向