Badrinath Roysam - Publications, H-index & Citations

Badrinath Roysam

University of Houston System

52H指数

270论文数

1.3W被引数

收录论文 44

发表时间

Computational delineation and cellular profiling of murine cortical cell layers using multiplex immunofluorescence imaging 利用多色免疫荧光成像对小鼠皮层细胞层进行计算描绘和细胞谱分析

Journal of Neuroscience Methods

IF2.3

2026-05-23

PREAI

Singh, Aditi; Maynard, Mark E.; Huang, Liqiang; Kang, Anthony M.; Prasad, Saurabh; Kasthuri, Kannan; Sedlock, Andrea; Maric, Dragan; Dash, Pramod K.; Redell, John B.; Roysam, Badrinath

Weak-to-strong generalization enables fully automated training of multi-head mask-RCNN model for segmenting densely overlapping cell nuclei in multiplex whole-slice brain images 弱到强泛化实现多头掩码RCNN模型对多重全切片脑图像中密集重叠细胞核分割的完全自动化训练

Frontiers in Bioinformatics

IF3.9

2026-05-11

OAAI

LB Lin Bai; XL Xiaoyang Li; LH Liqiang Huang; QN Quynh Nguyen; HV Hien Van Nguyen; SP Saurabh Prasad; DM Dragan Maric; JR John Redell; PD Pramod Dash; BR Badrinath Roysam

mViSE: A visual search engine for analyzing multiplex IHC brain tissue images (spatial proteomics)mViSE：一个用于分析多重IHC脑组织图像（空间蛋白质组学）的视觉搜索引擎

Scientific Reports

IF3.9

2026-02-23

OAAI

Liqiang Huang; Rachel Mills; Saikiran Mandula; Lin Bai; Mahtab Jeyhani; John Redell; Hien Nguyen; Saurabh Prasad; Dragan Maric; Badrinath Roysam

Label-free TIMING: an efficient; reliable and scalable AI workflow for automated profiling of cell-cell interaction behaviors in nanowell arrays 无标签TIMING：一种高效、可靠且可扩展的AI工作流，用于自动化分析纳米孔阵列中的细胞-细胞相互作用行为

Frontiers in Bioinformatics

IF3.9

2026-02-12

OAAI

Anuj S. Todkar; Shyam Reddy Kotha; Lin Bai; Saikiran Mandula; Hannah B. Wilson; Daniel D. Meyer; Rebecca Berdeaux; Badrinath Roysam; Navin Varadarajan

A Combination of Low Doses of Lithium and Valproate Improves Cognitive Outcomes after Mild Traumatic Brain Injury

JOURNAL OF NEUROTRAUMA

IF3.8

2024-10-28

PREAI

Redell, John B.; Maynard, Mark E.; Hylin, Michael J.; Hood, Kimberly N.; Sedlock, Andrea; Maric, Dragan; Zhao, Jing; Moore, Anthony N.; Roysam, Badrinath; Pati, Shibani; Dash, Pramod K.

BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets (vol 20, pg 824, 2023)

NATURE METHODS

IF32.1

2024-08-02

OAAI

Manubens-Gil, Linus; Zhou, Zhi; Chen, Hanbo; Ramanathan, Arvind; Liu, Xiaoxiao; Liu, Yufeng; Bria, Alessandro; Gillette, Todd; Ruan, Zongcai; Yang, Jian; Radojevic, Miroslav; Zhao, Ting; Cheng, Li; Qu, Lei; Liu, Siqi; Bouchard, Kristofer E.; Gu, Lin; Cai, Weidong; Ji, Shuiwang; Roysam, Badrinath; Wang, Ching-Wei; Yu, Hongchuan; Sironi, Amos; Iascone, Daniel Maxim; Zhou, Jie; Bas, Erhan; Conde-Sousa, Eduardo; Aguiar, Paulo; Li, Xiang; Li, Yujie; Nanda, Sumit; Wang, Yuan; Muresan, Leila; Fua, Pascal; Ye, Bing; He, Hai-yan; Staiger, Jochen F.; Peter, Manuel; Cox, Daniel N.; Simonneau, Michel; Oberlaender, Marcel; Jefferis, Gregory; Ito, Kei; Gonzalez-Bellido, Paloma; Kim, Jinhyun; Rubel, Edwin; Cline, Hollis T.; Zeng, Hongkui; Nern, Aljoscha; Chiang, Ann-Shyn; Yao, Jianhua; Roskams, Jane; Livesey, Rick; Stevens, Janine; Liu, Tianming; Dang, Chinh; Guo, Yike; Zhong, Ning; Tourassi, Georgia; Hill, Sean; Hawrylycz, Michael; Koch, Christof; Meijering, Erik; Ascoli, Giorgio A.; Peng, Hanchuan

Cellular data extraction from multiplexed brain imaging data using self-supervised Dual-loss Adaptive Masked Autoencoder

ARTIFICIAL INTELLIGENCE IN MEDICINE

IF6.2

2024-05-01

PREAI

Ly, Son T.; Lin, Bai; Vo, Hung Q.; Maric, Dragan; Roysam, Badrinath; Nguyen, Hien V.

BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets

NATURE METHODS

IF32.1

2023-04-17

OAAI

Salicylic acid inducible nucleocytoplasmic shuttling of NPR1 fusion proteins in human cells

BIOTECHNOLOGY AND BIOENGINEERING

IF3.6

2021-11-03

OAAI

Sadeghi, Fatemeh; Kumar, Monish; Bandey, Irfan N.; Li, Xiaoyang; Roysam, Badrinath; Varadarajan, Navin

Whole-brain tissue mapping toolkit using large-scale highly multiplexed immunofluorescence imaging and deep neural networks 使用大规模高度多重免疫荧光成像和深度神经网络的全脑组织映射工具包

NATURE COMMUNICATIONS

IF15.7

2021-03-10

OAAI

Maric, Dragan; Jahanipour, Jahandar; Li, Xiaoyang Rebecca; Singh, Aditi; Mobiny, Aryan; Hien Van Nguyen; Sedlock, Andrea; Grama, Kedar; Roysam, Badrinath

Artificial intelligence and machine learning in nephropathology 肾脏病理学中的人工智能和机器学习

KIDNEY INTERNATIONAL

IF12.6

2020-07-01

OAAI

Becker, Jan U.; Mayerich, David; Padmanabhan, Meghana; Barratt, Jonathan; Ernst, Angela; Boor, Peter; Cicalese, Pietro A.; Mohan, Chandra; Nguyen, Hien V.; Roysam, Badrinath

Automated Classification of Apoptosis in Phase Contrast Microscopy Using Capsule Network

IEEE TRANSACTIONS ON MEDICAL IMAGING

IF9.8

2020-01-01

PREAI

Mobiny, Aryan; Lu, Hengyang; Nguyen, Hien V.; Roysam, Badrinath; Varadarajan, Navin

Defining potency of CAR+ T cells: Fast and furious or slow and steady

ONCOIMMUNOLOGY

IF6.3

2018-05-07

OAAI

Liadi, Ivan; Singh, Harjeet; Romain, Gabrielle; Roysam, Badrinath; Cooper, Laurence J. N.; Varadarajan, Navin

Unsupervised Profiling of Microglial Arbor Morphologies and Distribution Using a Nonparametric Bayesian Approach

IEEE JOURNAL OF SELECTED TOPICS IN SIGNAL PROCESSING

IF13.7

2016-02-01

PREAI

Xu, Yan; Megjhani, Murad; Trett, Kristen; Shain, William; Roysam, Badrinath; Han, Zhu

Preexisting epithelial diversity in normal human livers: A tissue-tethered cytometric analysis in portal/periportal epithelial cells

HEPATOLOGY

IF15.8

2013-04-01

OAAI

Isse, Kumiko; Lesniak, Andrew; Grama, Kedar; Maier, John; Specht, Susan; Castillo-Rama, Marcela; Lunz, John; Roysam, Badrinath; Michalopoulos, George; Demetris, Anthony J.

A Vector SIFT Detector for Interest Point Detection in Hyperspectral Imagery

IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING

IF8.6

2012-11-01

PREAI

Dorado-Munoz, Leidy P.; Velez-Reyes, Miguel; Mukherjee, Amit; Roysam, Badrinath

Biological imaging software tools 生物成像软件工具

NATURE METHODS

IF32.1

2012-06-28

435

OAAI

Eliceiri, Kevin W.; Berthold, Michael R.; Goldberg, Ilya G.; Ibanez, Luis; Manjunath, B. S.; Martone, Maryann E.; Murphy, Robert F.; Peng, Hanchuan; Plant, Anne L.; Roysam, Badrinath; Stuurmann, Nico; Swedlow, Jason R.; Tomancak, Pavel; Carpenter, Anne E.

Digital Transplantation Pathology: Combining Whole Slide Imaging, Multiplex Staining and Automated Image Analysis

AMERICAN JOURNAL OF TRANSPLANTATION

IF8.2

2012-01-01

OAAI

Isse, K.; Lesniak, A.; Grama, K.; Roysam, B.; Minervini, M. I.; Demetris, A. J.

Vertebrate neural stem cell segmentation, tracking and lineaging with validation and editing

NATURE PROTOCOLS

IF16

2011-11-17

OAAI

Winter, Mark; Wait, Eric; Roysam, Badrinath; Goderie, Susan K.; Ali, Rania Ahmed Naguib; Kokovay, Erzsebet; Temple, Sally; Cohen, Andrew R.