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C

Chris Daum

Lawrence Berkeley National Laboratory
H指数:37
被引数:4,427

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Phenogenomics reveals the ecology and evolution of Trichoderma fungi for sustainable agriculture

表型基因组学揭示木霉真菌的生态和进化，用于可持续农业

Nature Microbiology
IF19.4
2026-03-030
OA
Andrei S. Steindorff; Feng M. Cai; Mingyue Ding; Siqi Jiang; Lea Atanasova; Scott E. Baker; Jomal Rodrigues Barbosa-Filho; Gunseli Bayram Akcapinar; Daren W. Brown; Priscila Chaverri; Peijie Chen; Komal Chenthamara; Chris Daum; Elodie Drula; Mukesh Dubey; Mikael Brandström Durling; Daniel Flatschacher; Thomas Ebner; Tamás Emri; Renwei Gao; Raphaela Castro Georg; Bernard Henrissat; Rosa Hermosa; Alfredo Herrera-Estrella; Wolfgang Hinterdobler; Philipp Kainz; Magnus Karlsson; László Kredics; Christian P. Kubicek; Alan Kuo; Kurt LaButti; Anna Lipzen; Matteo Lorito; Robert L. Mach; Gelsomina Manganiello; Tamás Marik; Natalia Martinez-Reyes; Michael Mayrhofer-Reinhartshuber; Márton Miskei; Marie-Claude Moisan; Stephen Mondo; Enrique Monte; Vivian Ng; Guan Pang; Jasmyn Pangilinan; Mao Peng; Edoardo Piombo; István Pócsi; Mohammad Javad Rahimi; Sumitha K. Reddy; Robert Riley; Sabrina Sarrocco; Matthias Schmal; Monika Schmoll; Attila Szűcs; Sheridan L. Woo; Oded Yarden; Susanne Zeilinger; Christian Zimmermann; Ekaterina Shelest; Adrian Tsang; Randy Berka; Ronald P. de Vries; Igor V. Grigoriev; Irina S. Druzhinina
The genomic footprints of wild Saccharum species trace domestication, diversification, and modern breeding of sugarcane

野生甘蔗（Saccharum）物种的基因组印记追溯了甘蔗的驯化、多样化和现代育种。

Cell
IF42.5
2025-10-140
OAAI
Olivier Garsmeur; Simon Rio; Nicolas Pompidor; Anna Lipzen; Catherine Hervouet; Théo Durand; Chris Daum; Yuko Yoshinaga; Mike Butterfield; Alexander Sanchez; George Piperidis; Noa Lincoln; Anna Hale; Jean Yves Hoarau; Yoshifumi Terajima; Prakash Lakshmanan; Erik Sacks; Shailendra Sharma; Marotea Vitrac; Kerrie Barry; Jeremy Schmutz; Angélique D’Hont
Section-level genome sequencing and comparative genomics of Aspergillus sections Cavernicolus and Usti

节水平基因组测序及曲霉属Cavernicolus和Usti组的比较基因组学

STUDIES IN MYCOLOGY
IF17.1
2025-01-010
PRE
Nybo, J. L.; Vesth, T. C.; Theobald, S.; Frisvad, J. C.; Larsen, T. O.; Kjaerboelling, I.; Rothschild-Mancinelli, K.; Lyhne, E. K.; Barry, K.; Clum, A.; Yoshinaga, Y.; Ledsgaard, L.; Daum, C.; Lipzen, A.; Kuo, A.; Riley, R.; Mondo, S.; Labutti, K.; Haridas, S.; Pangalinan, J.; Salamov, A. A.; Simmons, B. A.; Magnuson, J. K.; Chen, J.; Drula, E.; Henrissat, B.; Wiebenga, A.; Lubbers, R. J. M.; Muller, A.; Gomes, A. C. dos Santos; Makela, M. R.; Stajich, J. E.; Grigorie, I., V; Mortensen, U. H.; Andersen, M. R.
Allopolyploidy expanded gene content but not pangenomic variation in the hexaploid oilseed Camelina sativa

异源多倍体扩大了六倍体油籽山茶花的基因含量，但没有全基因组变异

GENETICS
IF5.1
2024-11-152
OA
Bird, Kevin A.; Brock, Jordan R.; Grabowski, Paul P.; Harder, Avril M.; Healy, Adam L.; Shu, Shengqiang; Barry, Kerrie; Boston, Loribeth; Daum, Christopher; Guo, Jie; Lipzen, Anna; Walstead, Rachel; Grimwood, Jane; Schmutz, Jeremy; Lu, Chaofu; Comai, Luca; Mckay, John K.; Pires, J. Chris; Edger, Patrick P.; Lovell, John T.; Kliebenstein, Daniel J.
Genomes of multicellular algal sisters to land plants illuminate signaling network evolution

陆地植物的多细胞藻类姐妹的基因组阐明了信号网络的演变

NATURE GENETICS
IF31.8
2024-05-0120
OAAI
Feng, Xuehuan; Zheng, Jinfang; Irisarri, Iker; Yu, Huihui; Zheng, Bo; Ali, Zahin; de Vries, Sophie; Keller, Jean; Fuerst-Jansen, Janine M. R.; Dadras, Armin; Zegers, Jaccoline M. S.; Rieseberg, Tim P.; Dhabalia Ashok, Amra; Darienko, Tatyana; Bierenbroodspot, Maaike J.; Gramzow, Lydia; Petroll, Romy; Haas, Fabian B.; Fernandez-Pozo, Noe; Nousias, Orestis; Li, Tang; Fitzek, Elisabeth; Grayburn, W. Scott; Rittmeier, Nina; Permann, Charlotte; Ruempler, Florian; Archibald, John M.; Theissen, Guenter; Mower, Jeffrey P.; Lorenz, Maike; Buschmann, Henrik; von Schwartzenberg, Klaus; Boston, Lori; Hayes, Richard D.; Daum, Chris; Barry, Kerrie; Grigoriev, Igor V.; Wang, Xiyin; Li, Fay-Wei; Rensing, Stefan A.; Ben Ari, Julius; Keren, Noa; Mosquna, Assaf; Holzinger, Andreas; Delaux, Pierre-Marc; Zhang, Chi; Huang, Jinling; Mutwil, Marek; de Vries, Jan; Yin, Yanbin
A large sequenced mutant library - valuable reverse genetic resource that covers 98% of sorghum genes

涵盖高粱基因98% 的大型测序突变文库-有价值的反向遗传资源

PLANT JOURNAL
IF5.7
2023-12-158
OAAI
Jiao, Yinping; Nigam, Deepti; Barry, Kerrie; Daum, Chris; Yoshinaga, Yuko; Lipzen, Anna; Khan, Adil; Parasa, Sai-Praneeth; Wei, Sharon; Lu, Zhenyuan; Tello-Ruiz, Marcela K.; Dhiman, Pallavi; Burow, Gloria; Hayes, Chad; Chen, Junping; Brandizzi, Federica; Mortimer, Jenny; Ware, Doreen; Xin, Zhanguo
Genome-scale phylogeny and comparative genomics of the fungal order Sordariales

真菌Sordariales的基因组规模系统发育和比较基因组学

MOLECULAR PHYLOGENETICS AND EVOLUTION
IF3.6
2023-12-018
OAAI
Hensen, Noah; Bonometti, Lucas; Westerberg, Ivar; Brannstrom, Ioana Onut; Guillou, Sonia; Cros-Aarteil, Sandrine; Calhoun, Sara; Haridas, Sajeet; Kuo, Alan; Mondo, Stephen; Pangilinan, Jasmyn; Riley, Robert; Labutti, Kurt; Andreopoulos, Bill; Lipzen, Anna; Chen, Cindy; Yan, Mi; Daum, Chris; Ng, Vivian; Clum, Alicia; Steindorff, Andrei; Ohm, Robin A.; Martin, Francis; Silar, Philippe; Natvig, Donald O.; Lalanne, Christophe; Gautier, Valerie; Ament-Velasquezi, Sandra Lorena; Kruys, Asa; Hutchinson, Miriam I.; Powell, Amy Jo; Barry, Kerrie; Miller, Andrew N.; Grigoriev, Igor, V; Debuchy, Robert; Gladieux, Pierre; Thoren, Markus Hiltunen; Johannesson, Hanna
Comparative genomics of Mollicutes-related endobacteria supports a late invasion into Mucoromycota fungi

与molicutes相关的细菌的比较基因组学支持对Mucoromycota真菌的晚期入侵

COMMUNICATIONS BIOLOGY
IF5.1
2023-09-183
OAAI
Longley, Reid; Robinson, Aaron; Liber, Julian A.; Bryson, Abigail E.; Morales, Demosthenes P.; Labutti, Kurt; Riley, Robert; Mondo, Stephen J.; Kuo, Alan; Yoshinaga, Yuko; Daum, Chris; Barry, Kerrie; Grigoriev, Igor V.; Desiro, Alessandro; Chain, Patrick S. G.; Bonito, Gregory
JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom

JGI植物基因图谱: 一个可更新的转录组资源，用于改善植物王国的功能基因描述

NUCLEIC ACIDS RESEARCH
IF13.1
2023-08-0119
OAAI
Sreedasyam, Avinash; Plott, Christopher; Hossain, Md Shakhawat; Lovell, John T.; Grimwood, Jane; Jenkins, Jerry W.; Daum, Christopher; Barry, Kerrie; Carlson, Joseph; Shu, Shengqiang; Phillips, Jeremy; Amirebrahimi, Mojgan; Zane, Matthew; Wang, Mei; Goodstein, David; Haas, Fabian B.; Hiss, Manuel; Perroud, Pierre-Francois; Jawdy, Sara S.; Yang, Yongil; Hu, Rongbin; Johnson, Jenifer; Kropat, Janette; Gallaher, Sean D.; Lipzen, Anna; Shakirov, Eugene, V; Weng, Xiaoyu; Torres-Jerez, Ivone; Weers, Brock; Conde, Daniel; Pappas, Marilia R.; Liu, Lifeng; Muchlinski, Andrew; Jiang, Hui; Shyu, Christine; Huang, Pu; Sebastian, Jose; Laiben, Carol; Medlin, Alyssa; Carey, Sankalpi; Carrell, Alyssa A.; Chen, Jin-Gui; Perales, Mariano; Swaminathan, Kankshita; Allona, Isabel; Grattapaglia, Dario; Cooper, Elizabeth A.; Tholl, Dorothea; Vogel, John P.; Weston, David J.; Yang, Xiaohan; Brutnell, Thomas P.; Kellogg, Elizabeth A.; Baxter, Ivan; Udvardi, Michael; Tang, Yuhong; Mockler, Todd C.; Juenger, Thomas E.; Mullet, John; Rensing, Stefan A.; Tuskan, Gerald A.; Merchant, Sabeeha S.; Stacey, Gary; Schmutz, Jeremy
Overexpression of REDUCED WALL ACETYLATION C increases xylan acetylation and biomass recalcitrance in Populus

降低壁乙酰化C的过表达增加了杨树中的木聚糖乙酰化和生物量顽固

PLANT PHYSIOLOGY
IF6.9
2023-07-0315
OAAI
Zhang, Jin; Wang, Xiaqin; Wang, Hsin-Tzu; Qiao, Zhenzhen; Yao, Tao; Xie, Meng; Urbanowicz, Breeanna R.; Zeng, Wei; Jawdy, Sara S.; Gunter, Lee E.; Yang, Xiaohan; Czarnecki, Olaf; Regan, Sharon; Seguin, Armand; Rottmann, William; Winkeler, Kimberly A.; Sykes, Robert; Lipzen, Anna; Daum, Chris; Barry, Kerrie; Lu, Meng-Zhu; Tuskan, Gerald A.; Muchero, Wellington; Chen, Jin-Gui
A thousand-genome panel retraces the global spread and adaptation of a major fungal crop pathogen
NATURE COMMUNICATIONS
IF15.7
2023-02-2428
OAAI
Feurtey, Alice; Lorrain, Cecile; McDonald, Megan C.; Milgate, Andrew; Solomon, Peter S.; Warren, Rachael; Puccetti, Guido; Scalliet, Gabriel; Torriani, Stefano F. F.; Gout, Lilian; Marcel, Thierry C.; Suffert, Frederic; Alassimone, Julien; Lipzen, Anna; Yoshinaga, Yuko; Daum, Christopher; Barry, Kerrie; Grigoriev, Igor V.; Goodwin, Stephen B.; Genissel, Anne; Seidl, Michael F.; Stukenbrock, Eva H.; Lebrun, Marc-Henri; Kema, Gert H. J.; McDonald, Bruce A.; Croll, Daniel
Speciation Underpinned by Unexpected Molecular Diversity in the Mycorrhizal Fungal Genus Pisolithus

菌根真菌属pisolius的意外分子多样性支持的物种形成

MOLECULAR BIOLOGY AND EVOLUTION
IF5.3
2023-02-229
OAAI
Plett, Jonathan M.; Miyauchi, Shingo; Morin, Emmanuelle; Plett, Krista; Wong-Bajracharya, Johanna; de Freitas Pereira, Maira; Kuo, Alan; Henrissat, Bernard; Drula, Elodie; Wojtalewicz, Dominika; Riley, Robert; Pangilinan, Jasmyn; Andreopoulos, William; LaButti, Kurt; Daum, Chris; Yoshinaga, Yuko; Fauchery, Laure; Ng, Vivian; Lipzen, Anna; Barry, Kerrie; Singan, Vasanth; Guo, Jie; Lebel, Teresa; Costa, Mauricio Dutra; Grigoriev, Igor, V; Martin, Francis; Anderson, Ian C.; Kohler, Annegret

研究方向

暂未获取到该数据
K
Kerrie Barry
H 指数:96论文数:581被引数:4.0万
I
Igor V. Grigoriev
H 指数:120论文数:870被引数:7.8万
A
Anna Lipzen
H 指数:66论文数:577被引数:1.6万
Y
Yuko Yoshinaga
H 指数:37论文数:104被引数:1.3万
J
Jeremy Schmutz
H 指数:112论文数:514被引数:9.7万
A
Alicia Clum
H 指数:42论文数:231被引数:1.6万
K
Kurt LaButti
H 指数:58论文数:257被引数:1.5万
N
Nikos C. Kyrpides
H 指数:116论文数:955被引数:8.7万
N
Natalia Ivanova
H 指数:89论文数:691被引数:4.4万
T
T. B. K. Reddy
H 指数:38论文数:191被引数:1.0万