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Shujiro Okuda

niigata university medical and dental hospital

49H指数
307论文数
3.0W被引数
收录论文 104
发表时间
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Allele-specific directionality and evolutionary timing of BRCA1/2 loss of heterozygosity in gastric cancerBRCA1/2杂合性丢失在胃癌中的等位基因特异方向性和进化时间
errScientific Reports
IF3.9
err2026-09-18
err0
errOAAI
errHiroshi Ichikawa; Shun Abe; Takahiro Nagai; Yosuke Kano; Yusuke Muneoka; Sou Hiroi; Yasuo Obata; Kazuki Moro; Yuki Hirose; Mae Nakano; Kazuyasu Takizawa; Masato Nakano; Yoshifumi Shimada; Jun Sakata; Shujiro Okuda; Toshifumi Wakai
err分享
err收藏
DATTs: A Database of Disease-Associated Therapeutic Targets With Required Actions for TreatmentDATTs：一个包含治疗所需行动的疾病相关治疗靶点数据库
errMolecular Informatics
IF3.1
err2026-09-14
err0
errOAAI
errRyusuke Sawada; Noriko Yuyama Otani; Michio Iwata; Tomokazu Shibata; Shujiro Okuda; Hiroyo Nishide; Ikuo Uchiyama; Yoshihiro Yamanishi
err分享
err收藏
Comparative whole genome analysis of Mycobacterium tuberculosis isolated from BPaLM and individualized regimen treated patients at Dr. Soetomo Hospital, Indonesia来自印度尼西亚苏托莫医院经BPaLM和个体化方案治疗的结核分枝杆菌分离株的全基因组比较分析
errMolecular Biology Reports
IF2.8
err2026-08-24
err0
PREAI
errMuhamad Frendy Setyawan; Amina K. Shaban; Hayato Takihara; Yoshitaka Tateishi; Akihito Nishiyama; Yuriko Ozeki; Zakiyathun Nuha; Ni Made Mertaniasih; Shujiro Okuda; Soedarsono Soedarsono; Maryam Omrani; Yuni Rukminiati; Ummi Amaliatush Sholichah Putri Merdekawati; Wayan Tunas Artama; Sohkichi Matsumoto
err分享
err收藏
Peptide turnover prediction using transformer architectures on large-scale time-series proteomic data使用transformer架构对大规模时间序列蛋白质组学数据进行肽周转预测
errBMC Genomics
IF3.7
err2026-01-22
err0
errOAAI
errKoki Ishino; Akiyasu C. Yoshizawa; Yuting Liu; Shujiro Okuda
err分享
err收藏
Update and new implementation of the MIRAGE reporting guidelines for mass spectrometry experiments in glycoscienceMIRAGE报告规范的更新与在糖科学质谱实验中的新实施
errMolecular & Cellular Proteomics
IF5.5
err2025-11-24
err0
errOAAI
errFrederique Lisacek; William E. Hackett; Morten Thaysen-Andersen; Niclas G. Karlsson; Joshua Klein; Daniel Kolarich; Marissa L. Maciej-Hulme; Shujiro Okuda; Nicolle H. Packer; Weston B. Struwe; Yushi Takahashi; Michael Tiemeyer; Joseph Zaia; Kiyoko F. Aoki-Kinoshita; Carsten Kettner
err分享
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The ProteomeXchange consortium in 2026: making proteomics data FAIRProteomeXchange联盟在2026年：实现蛋白质组学数据的FAIR化
errNUCLEIC ACIDS RESEARCH
IF13.1
err2025-11-01
err1
PREAI
errDeutsch, Eric W.; Bandeira, Nuno; Perez-Riverol, Yasset; Sharma, Vagisha; Carver, Jeremy j; Mendoza, Luis; Kundu, Deepti J.; Bandla, Chakradhar; Kamatchinathan, Selvakumar; Hewapathirana, Suresh; Sun, Zhi; Kawano, Shin; Okuda, Shujiro; Connolly, Brian; Maclean, Brendan; Maccoss, Michael J.; Chen, Tao; Zhu, Yunping; Ishihama, Yasushi; Vizcaino, Juan Antonio
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Phosphoproteomic analysis of signal transduction dynamics induced by a modified cell-penetrating peptide–protein complex由一种改良的细胞穿透肽–蛋白质复合物诱导的信号转导动力学的磷酸蛋白质组学分析
errBiochemical and Biophysical Research Communications
IF2.2
err2025-07-16
err0
PREAI
errAkiko Okuda; Hayato Takihara; Reika Kuroiwa; Shujiro Okuda
err分享
err收藏
Identification of Endogenous Sequences Interacting with METTL3/METTL14 RNA Methyltransferase鉴定与METTL3/METTL14 RNA甲基转移酶相互作用的内源性序列
errCHEMBIOCHEM
IF2.8
err2025-04-14
err0
PREAI
errEndoh, Tamaki; Ling, Yiwei; Okuda, Shujiro; Imanishi, Miki
err分享
err收藏
Clinical utility of tumor-infiltrating lymphocyte evaluation by two different methods in breast cancer patients treated with neoadjuvant chemotherapy
errBREAST CANCER
IF2.9
err2025-01-14
err0
errOAAI
errNagahashi, Masayuki; Ishikawa, Eri; Nagai, Takahiro; Kanaoka, Haruka; Oshiro, Aoi; Togashi, Yusa; Hattori, Akira; Tsuchida, Junko; Higuchi, Tomoko; Nishimukai, Arisa; Murase, Keiko; Takatsuka, Yuichi; Kihara, Takako; Ling, Yiwei; Okuda, Shujiro; Hirota, Seiichi; Miyoshi, Yasuo
err分享
err收藏
Cooperation of GlycoPOST and UniCarb-DR towards a comprehensive glycomics data repository workflow
errANALYTICAL AND BIOANALYTICAL CHEMISTRY
IF3.8
err2024-11-29
err0
errOAAI
errTakahashi, Yushi; Karlsson, Niclas G.; Okuda, Shujiro; Aoki-Kinoshita, Kiyoko F.
err分享
err收藏
jPOST environment accelerates the reuse and reanalysis of public proteome mass spectrometry data
errNUCLEIC ACIDS RESEARCH
IF13.1
err2024-11-11
err1
errOAAI
errOkuda, Shujiro; Yoshizawa, Akiyasu C.; Kobayashi, Daiki; Takahashi, Yushi; Watanabe, Yu; Moriya, Yuki; Hatano, Atsushi; Takami, Tomoyo; Matsumoto, Masaki; Araki, Norie; Tabata, Tsuyoshi; Iwasaki, Mio; Sugiyama, Naoyuki; Kodera, Yoshio; Tanaka, Satoshi; Goto, Susumu; Kawano, Shin; Ishihama, Yasushi
err分享
err收藏
Insights into predicting small molecule retention times in liquid chromatography using deep learning
errJOURNAL OF CHEMINFORMATICS
IF5.7
err2024-10-07
err0
errOAAI
errLiu, Yuting; Yoshizawa, Akiyasu C.; Ling, Yiwei; Okuda, Shujiro
err分享
err收藏
Enteropathway: the metabolic pathway database for the human gut microbiota
errBRIEFINGS IN BIOINFORMATICS
IF7.7
err2024-09-02
err0
errOAAI
errShiroma, Hirotsugu; Darzi, Youssef; Terajima, Etsuko; Nakagawa, Zenichi; Tsuchikura, Hirotaka; Tsukuda, Naoki; Moriya, Yuki; Okuda, Shujiro; Goto, Susumu; Yamada, Takuji
err分享
err收藏
PCPE-1, a brown adipose tissue-derived cytokine, promotes obesity-induced liver fibrosis
errEMBO JOURNAL
IF8.3
err2024-08-19
err2
PREAI
errHsiao, Yung Ting; Yoshida, Yohko; Okuda, Shujiro; Abe, Manabu; Mizuno, Seiya; Takahashi, Satoru; Nakagami, Hironori; Morishita, Ryuichi; Kamimura, Kenya; Terai, Shuji; Aung, Tin May; Li, Ji; Furihata, Takaaki; Tang, Jing Yuan; Walsh, Kenneth; Ishigami, Akihito; Minamino, Tohru; Shimizu, Ippei
err分享
err收藏
Landscape of homologous recombination deficiency in gastric cancer and clinical implications for first-line chemotherapy
errGASTRIC CANCER
IF5.1
err2024-08-07
err0
PREAI
errIchikawa, Hiroshi; Aizawa, Masaki; Kano, Yosuke; Hanyu, Takaaki; Muneoka, Yusuke; Hiroi, Sou; Ueki, Hiroto; Moro, Kazuki; Hirose, Yuki; Miura, Kohei; Shimada, Yoshifumi; Sakata, Jun; Yabusaki, Hiroshi; Nakagawa, Satoru; Kawasaki, Takashi; Okuda, Shujiro; Wakai, Toshifumi
err分享
err收藏
Pathological and Biological Significance of the Specific Glycan, TRA-1-60, on Aggressive Gastric Adenocarcinoma
errLABORATORY INVESTIGATION
IF4.2
err2024-07-01
err0
PREAI
errMitsui, Ayaka; Iioka, Hidekazu; Ling, Yiwei; Okuda, Shujiro; Kurose, Akira; Schopperle, Michael; Kondo, Tomoko; Sakaguchi, Masakiyo; Saito, Ken; Kondo, Eisaku
err分享
err收藏
Clinical application of targeted tumour sequencing tests for detecting ERBB2 amplification and optimizing anti-HER2 therapy in gastric cancer
errBMC CANCER
IF3.4
err2024-06-11
err0
errOAAI
errIchikawa, Hiroshi; Usui, Kenji; Aizawa, Masaki; Shimada, Yoshifumi; Muneoka, Yusuke; Kano, Yosuke; Sugai, Mika; Moro, Kazuki; Hirose, Yuki; Miura, Kohei; Sakata, Jun; Yabusaki, Hiroshi; Nakagawa, Satoru; Kawasaki, Takashi; Umezu, Hajime; Okuda, Shujiro; Wakai, Toshifumi
err分享
err收藏
Clonal origin and genomic diversity in Lynch syndrome-associated endometrial cancer with multiple synchronous tumors: Identification of the pathogenicity of MLH1 p.L582H
errGENES CHROMOSOMES & CANCER
IF2.8
err2024-03-09
err0
errOAAI
errTakahashi, Kotaro; Yachida, Nozomi; Tamura, Ryo; Adachi, Sosuke; Kondo, Shuhei; Abe, Tatsuya; Umezu, Hajime; Nyuzuki, Hiromi; Okuda, Shujiro; Nakaoka, Hirofumi; Yoshihara, Kosuke
err分享
err收藏
Sperm-specific histone H1 in highly condensed sperm nucleus of Sargassum horneri
errSCIENTIFIC REPORTS
IF3.9
err2024-02-09
err1
errOAAI
errTakeuchi, Yu; Sato, Shinya; Nagasato, Chikako; Motomura, Taizo; Okuda, Shujiro; Kasahara, Masahiro; Takahashi, Fumio; Yoshikawa, Shinya
err分享
err收藏
Multi-omics analyses of choroid plexus carcinoma cell lines reveal potential targetable pathways and alterations脉络丛癌细胞系的多组学分析揭示了潜在的靶向途径和改变
errJOURNAL OF NEURO-ONCOLOGY
IF3.1
err2024-01-08
err0
PREAI
errHesham, Dina; On, Jotaro; Alshahaby, Nouran; Amer, Nada; Magdeldin, Sameh; Okada, Masayasu; Tsukamoto, Yoshihiro; Hiraishi, Tetsuya; Imai, Chihaya; Okuda, Shujiro; Wakai, Toshifumi; Kakita, Akiyoshi; Oishi, Makoto; El-Naggar, Shahenda; Natsumeda, Manabu
err分享
err收藏

研究方向

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合作学者
合作期刊
P
Peer Bork
H 指数: 233 · 论文数: 948
M
Masayuki Yamamoto
H 指数: 193 · 论文数: 2.1K
J
Johan Auwerx
H 指数: 183 · 论文数: 913
N
Noboru Mizushima
H 指数: 141 · 论文数: 424
K
Kenneth Walsh
H 指数: 127 · 论文数: 663
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