Lara Urban - Publications, H-index & Citations

Lara Urban

helmholtz association

37H指数

157论文数

1.7W被引数

收录论文 23

发表时间

Real-time genomic pathogen, resistance, and host range characterization from passive water sampling of wetland ecosystems 湿地生态系统被动水体采样实时表征基因组病原体、抗性和宿主范围

Applied and Environmental Microbiology

IF3.7

2026-05-20

OAAI

Perlas, Albert; Reska, Tim; Sanchez-Cano, Alberto; Mejias-Molina, Cristina; Gygax, Daniel; Martinez-Puchol, Sandra; Rusinol, Marta; Eger, Elias; Schaufler, Katharina; Hofle, Ursula; Croville, Guillaume; Le Loc'h, Guillaume; Guerin, Jean-Luc; Urban, Lara

Resolving plasmid-encoded carbapenem resistance dynamics and reservoirs in a hospital setting through nanopore sequencing 通过纳米孔测序解析医院环境中质粒编码的碳青霉烯耐药动力学和储存库

Microbial Genomics

IF4

2026-02-01

PREAI

Sauerborn, Ela; White, Rhys T.; Kalteis, Anna-Lena; Gygax, Daniel; Foster-Nyarko, Ebenezer; Wantia, Nina; Gebhardt, Friedemann; Urban, Lara

Evaluation of nanopore sequencing for increasing accessibility of eDNA studies in biodiverse countries 纳米孔测序技术在生物多样性国家开展eDNA研究中的应用评价

PLOS ONE

IF2.6

2025-10-16

PREAI

Gygax, Daniel; Ramirez, Sabina; Chibesa, Moses; Simpamba, Twakundine; Riffel, Michael; Riffel, Tom; Srivathsan, Amrita; Nijland, Reindert; Urban, Lara

Nanopore- and AI-empowered microbial viability inference 纳米孔与人工智能赋能的微生物存活推断

GigaScience

IF3.9

2025-09-03

OAAI

Harika Ürel; Sabrina Benassou; Hanna Marti; Tim Reska; Ela Sauerborn; Yuri Pinheiro Alves De Souza; Albert Perlas; Enrique Rayo; Michael Biggel; Stefan Kesselheim; Nicole Borel; Edward J Martin; Constanza B Venegas; Michael Schloter; Kathrin Schröder; Jana Mittelstrass; Simone Prospero; James M Ferguson; Lara Urban

Environmental screening through nanopore native sequencing leads to the detection of Batrachochytrium dendrobatidis in La Mandria Regional Park, Italy

GLOBAL ECOLOGY AND CONSERVATION

IF3.4

2025-06-01

OAAI

Varzandi, Amir reza; Reska, Tim; Urban, Lara; Zanet, Stefania; Ferroglio, Ezio

Leveraging Synteny to Generate Reference Genomes for Conservation: Assembling the Genomes of Hector's and Maui Dolphins 利用共线性生成用于保护的参考基因组：组装赫克托尔海豚和毛伊海豚的基因组

MOLECULAR ECOLOGY RESOURCES

IF5.5

2025-04-04

OAAI

S. Alvarez-Costes; C. S. Baker; R. Constantine; E. L. Carroll; J. Guhlin; L. Dutoit; S. Ferreira; D. Heimeier; N. J. Gemmell; J. Gillum; R. M. Hamner; W. Rayment; W. Roe; B. Te Aikā; L. Urban; A. Alexander

Improvements in RNA and DNA nanopore sequencing allow for rapid genetic characterization of avian influenza

VIRUS EVOLUTION

IF4

2025-02-18

OAAI

Perlas, Albert; Reska, Tim; Croville, Guillaume; Tarres-Freixas, Ferran; Guerin, Jean-Luc; Majo, Natalia; Urban, Lara

Air monitoring by nanopore sequencing

ISME COMMUNICATIONS

IF6.1

2024-07-16

OAAI

Reska, Tim; Pozdniakova, Sofya; Borras, Silvia; Perlas, Albert; Sauerborn, Ela; Canas, Lidia; Schloter, Michael; Rodo, Xavier; Wang, Yuanyuan; Winkler, Barbro; Schnitzler, Joerg-Peter; Urban, Lara

Detection of hidden antibiotic resistance through real-time genomics

NATURE COMMUNICATIONS

IF15.7

2024-06-28

OAAI

Sauerborn, Ela; Corredor, Nancy Carolina; Reska, Tim; Perlas, Albert; Atum, Samir Vargas da Fonseca; Goldman, Nick; Wantia, Nina; da Costa, Clarissa Prazeres; Foster-Nyarko, Ebenezer; Urban, Lara

Non-invasive real-time genomic monitoring of the critically endangered kākāpō

ELIFE

IF0

2023-12-28

OAAI

Urban, Lara; Miller, Allison K.; Eason, Daryl; Vercoe, Deidre; Shaffer, Megan; Wilkinson, Shaun P.; Jeunen, Gert-Jan; Gemmell, Neil J.; Digby, Andrew

Species-wide genomics of kakapo provides tools to accelerate recovery

NATURE ECOLOGY & EVOLUTION

IF14.5

2023-08-28

OAAI

Guhlin, Joseph; Le Lec, Marissa F.; Wold, Jana; Koot, Emily; Winter, David; Biggs, Patrick J.; Galla, Stephanie J.; Urban, Lara; Foster, Yasmin; Cox, Murray P.; Digby, Andrew; Uddstrom, Lydia R.; Eason, Daryl; Vercoe, Deidre; Davis, Tane; Howard, Jason T.; Jarvis, Erich D.; Robertson, Fiona E.; Robertson, Bruce C.; Gemmell, Neil J.; Steeves, Tammy E.; Santure, Anna W.; Dearden, Peter K.

Real-time genomics for One Health

MOLECULAR SYSTEMS BIOLOGY

IF7.7

2023-06-16

OAAI

Urban, Lara; Perlas, Albert; Francino, Olga; Marti-Carreras, Joan; Muga, Brenda A.; Mwangi, Jenniffer W.; Boykin Okalebo, Laura; Stanton, Jo-Ann L.; Black, Amanda; Waipara, Nick; Fontsere, Claudia; Eccles, David; Urel, Harika; Reska, Tim; Morales, Hernan E.; Palmada-Flores, Marc; Marques-Bonet, Tomas; Watsa, Mrinalini; Libke, Zane; Erkenswick, Gideon; van Oosterhout, Cock

Environmental DNA metabarcoding describes biodiversity across marine gradients 环境DNA元编码描述了跨海洋梯度的生物多样性

ICES JOURNAL OF MARINE SCIENCE

IF3.4

2023-02-25

OAAI

Adams, Clare I. M.; Jeunen, Gert-Jan; Cross, Hugh; Taylor, Helen R.; Bagnaro, Antoine; Currie, Kim; Hepburn, Chris; Gemmell, Neil J.; Urban, Lara; Baltar, Federico; Stat, Michael; Bunce, Michael; Knapp, Michael

Assessing the utility of marine filter feeders for environmental DNA (eDNA) biodiversity monitoring

MOLECULAR ECOLOGY RESOURCES

IF5.5

2023-01-15

OAAI

Jeunen, Gert-Jan; Cane, Jasmine S.; Ferreira, Sara; Strano, Francesca; von Ammon, Ulla; Cross, Hugh; Day, Robert; Hesseltine, Sean; Ellis, Kaleb; Urban, Lara; Pearson, Niall; Olmedo-Rojas, Pamela; Kardailsky, Anya; Gemmell, Neil J.; Lamare, Miles

eLife's new model and its impact on science communication

ELIFE

IF0

2022-12-08

OAAI

Urban, Lara; De Niz, Mariana; Fernandez-Chiappe, Florencia; Ebrahimi, Hedyeh; Han, Laura K. M.; Mehta, Devang; Mencia, Regina; Mittal, Divyansh; Ochola, Elizabeth; Quezada, CarolinaPaz; Romani, Facundo; Sinapayen, Lana; Tay, Andy; Varma, Aalok; Elkheir, Lamis Yahia Mohamed

Commonly used Hardy-Weinberg equilibrium filtering schemes impact population structure inferences using RADseq data

MOLECULAR ECOLOGY RESOURCES

IF5.5

2022-06-05

OAAI

Pearman, William S.; Urban, Lara; Alexander, Alana

Haplotype-resolved assembly of diploid genomes without parental data

NATURE BIOTECHNOLOGY

IF41.7

2022-03-24

183

OAAI

Cheng, Haoyu; Jarvis, Erich D.; Fedrigo, Olivier; Koepfli, Klaus-Peter; Urban, Lara; Gemmell, Neil J.; Li, Heng

16S rRNA long-read nanopore sequencing is feasible and reliable for endometrial microbiome analysis

REPRODUCTIVE BIOMEDICINE ONLINE

IF3.5

2021-06-01

PREAI

Oberle, Anna; Urban, Lara; Falch-Leis, Stefanie; Ennemoser, Chiara; Nagai, Yoko; Ashikawa, Kyota; Ulm, Patricia A.; Hengstschlaeger, Markus; Feichtinger, Michael

Evidence of two deeply divergent co-existing mitochondrial genomes in the Tuatara reveals an extremely complex genomic organization

COMMUNICATIONS BIOLOGY

IF5.1

2021-01-29

OAAI

Macey, J. Robert; Pabinger, Stephan; Barbieri, Charles G.; Buring, Ella S.; Gonzalez, Vanessa L.; Mulcahy, Daniel G.; DeMeo, Dustin P.; Urban, Lara; Hime, Paul M.; Prost, Stefan; Elliott, Aaron N.; Gemmell, Neil J.

Freshwater monitoring by nanopore sequencing

ELIFE

IF0

2021-01-19

OAAI

Urban, Lara; Holzer, Andre; Baronas, J. Jotautas; Hall, Michael B.; Braeuninger-Weimer, Philipp; Scherm, Michael J.; Kunz, Daniel J.; Perera, Surangi N.; Martin-Herranz, Daniel E.; Tipper, Edward T.; Salter, Susannah J.; Stammnitz, Maximilian R.

研究方向