未登录 PanIN and CAF transitions in pancreatic carcinogenesis revealed with spatial data integration Bell, Alexander T. F.; Mitchell, Jacob T.; Kiemen, Ashley L.; Lyman, Melissa; Fujikura, Kohei; Lee, Jae W.; Coyne, Erin; Shin, Sarah M.; Nagaraj, Sushma; Deshpande, Atul; Wu, Pei-Hsun; Sidiropoulos, Dimitrios N.; Erbe, Rossin; Stern, Jacob; Chan, Rena; Williams, Stephen; Chell, James M.; Ciotti, Lauren; Zimmerman, Jacquelyn W.; Wirtz, Denis; Ho, Won Jin; Zaidi, Neeha; Thompson, Elizabeth; Jaffee, Elizabeth M.; Wood, Laura D.; Fertig, Elana J.; Kagohara, Luciane T. 分享 收藏
High resolution mapping of the tumor microenvironment using integrated single-cell, spatial and in situ analysis 使用集成的单细胞，空间和原位分析对肿瘤微环境进行高分辨率映射 Janesick, Amanda; Shelansky, Robert; Gottscho, Andrew D.; Wagner, Florian; Williams, Stephen R.; Rouault, Morgane; Beliakoff, Ghezal; Morrison, Carolyn A.; Oliveira, Michelli F.; Sicherman, Jordan T.; Kohlway, Andrew; Abousoud, Jawad; Drennon, Tingsheng Yu; Mohabbat, Seayar H.; Taylor, Sarah E. B. 分享 收藏
Uncovering the spatial landscape of molecular interactions within the tumor microenvironment through latent spaces (vol 14, pg 285, 2023) Deshpande, Atul; Loth, Melanie; Sidiropoulos, Dimitrios N.; Zhang, Shuming; Yuan, Long; Bell, Alexander T. F.; Zhu, Qingfeng; Ho, Won Jin; Santa-Maria, Cesar; Gilkes, Daniele M.; Williams, Stephen R.; Uytingco, Cedric R.; Chew, Jennifer; Hartnett, Andrej; Bent, Zachary W.; V. Favorov, Alexander; Popel, Aleksander S.; Yarchoan, Mark; Kiemen, Ashley; Wu, Pei-Hsun; Fujikura, Kohei; Wirtz, Denis; Wood, Laura D.; Zheng, Lei; Jaffee, Elizabeth M.; Anders, Robert A.; Danilova, Ludmila; Stein-O'Brien, Genevieve; Kagohara, Luciane T.; Fertig, Elana J. 分享 收藏
Application of spatially resolved transcriptomics to screen multiple tumor biospecimens using tissue microarrays Mohabbat, Syrus; Singh, Hardeep; Williams, Stephen R.; Gutgesell, Lauren M. M.; Sukovich, David J.; Kamath, Govinda M.; Kim, Hanyoup; Janesick, Amanda; Shelansky, Robert; Beliakoff, Ghezal; Tentori, Augusto M.; Kim, Albert; Uytingco, Cedric R.; Taylor, Sarah 分享 收藏
Uncovering the spatial landscape of molecular interactions within the tumor microenvironment through latent spaces Deshpande, Atul; Loth, Melanie; Sidiropoulos, Dimitrios N.; Zhang, Shuming; Yuan, Long; Bell, Alexander T. F.; Zhu, Qingfeng; Ho, Won Jin; Santa-Maria, Cesar; Gilkes, Daniele M.; Williams, Stephen R.; Uytingco, Cedric R.; Chew, Jennifer; Hartnett, Andrej; Bent, Zachary W.; Favorov, Alexander V.; Popel, Aleksander S.; Yarchoan, Mark; Kiemen, Ashley; Wu, Pei-Hsun; Fujikura, Kohei; Wirtz, Denis; Wood, Laura D.; Zheng, Lei; Jaffee, Elizabeth M.; Anders, Robert A.; Danilova, Ludmila; Stein-O'Brien, Genevieve; Kagohara, Luciane T.; Fertig, Elana J. 分享 收藏
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A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing (vol 10, 3660, 2019) Petti, Allegra A.; Williams, Stephen R.; Miller, Christopher A.; Fiddes, Ian T.; Srivatsan, Sridhar N.; Chen, David Y.; Fronick, Catrina C.; Fulton, Robert S.; Church, Deanna M.; Ley, Timothy J. 分享 收藏
Tumor Microenvironment Characterization using a Spatial Multiomic Assay to Simultaneously Profile Protein and Gene Expression in FFPE Tumors Chew, Jennifer; Uytingco, Cedric; Anaparthy, Naishitha; Chiang, Jun; Galonska, Christina; Ganapathy, Karthik; Hatori, Ryo; Hermes, Alexander; Katiraee, Layla; Katsori, Anna-Maria; Nitsch, William; Roelli, Patrick; Shuga, Joe; Spalinkas, Rapolas; Turkekul, Mesruh; Veire, Benton; Walker, Dan; Sheldon, Jyoti; Weisenfeld, Neil; Williams, Stephen; Bent, Zachary; Stoeckius, Marlon 分享 收藏
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A single-cell and spatially resolved atlas of human breast cancers 人类乳腺癌的单细胞和空间分辨图谱 Wu, Sunny Z.; Al-Eryani, Ghamdan; Roden, Daniel Lee; Junankar, Simon; Harvey, Kate; Andersson, Alma; Thennavan, Aatish; Wang, Chenfei; Torpy, James R.; Bartonicek, Nenad; Wang, Taopeng; Larsson, Ludvig; Kaczorowski, Dominik; Weisenfeld, Neil, I; Uytingco, Cedric R.; Chew, Jennifer G.; Bent, Zachary W.; Chan, Chia-Ling; Gnanasambandapillai, Vikkitharan; Dutertre, Charles-Antoine; Gluch, Laurence; Hui, Mun N.; Beith, Jane; Parker, Andrew; Robbins, Elizabeth; Segara, Davendra; Cooper, Caroline; Mak, Cindy; Chan, Belinda; Warrier, Sanjay; Ginhoux, Florent; Millar, Ewan; Powell, Joseph E.; Williams, Stephen R.; Liu, X. Shirley; O'Toole, Sandra; Lim, Elgene; Lundeberg, Joakim; Perou, Charles M.; Swarbrick, Alexander 分享 收藏
Spatial transcriptomics at subspot resolution with BayesSpace 具有贝叶斯空间的子点分辨率的空间转录组学 Zhao, Edward; Stone, Matthew R.; Ren, Xing; Guenthoer, Jamie; Smythe, Kimberly S.; Pulliam, Thomas; Williams, Stephen R.; Uytingco, Cedric R.; Taylor, Sarah E. B.; Nghiem, Paul; Bielas, Jason H.; Gottardo, Raphael 分享 收藏
Transcriptome analysis of MBD5-associated neurodevelopmental disorder (MAND) neural progenitor cells reveals dysregulation of autism-associated genes Mullegama, Sureni, V; Klein, Steven D.; Williams, Stephen R.; Innis, Jeffrey W.; Probst, Frank J.; Haldeman-Englert, Chad; Martinez-Agosto, Julian A.; Yang, Ying; Tian, Yuchen; Elsea, Sarah H.; Ezashi, Toshihiko 分享 收藏
A spatially resolved brain region- and cell type-specific isoform atlas of the postnatal mouse brain 出生后小鼠大脑的空间分辨的大脑区域和细胞类型特异性同工型图谱 Joglekar, Anoushka; Prjibelski, Andrey; Mahfouz, Ahmed; Collier, Paul; Lin, Susan; Schlusche, Anna Katharina; Marrocco, Jordan; Williams, Stephen R.; Haase, Bettina; Hayes, Ashley; Chew, Jennifer G.; Weisenfeld, Neil I.; Wong, Man Ying; Stein, Alexander N.; Hardwick, Simon A.; Hunt, Toby; Wang, Qi; Dieterich, Christoph; Bent, Zachary; Fedrigo, Olivier; Sloan, Steven A.; Risso, Davide; Jarvis, Erich D.; Flicek, Paul; Luo, Wenjie; Pitt, Geoffrey S.; Frankish, Adam; Smit, August B.; Ross, M. Elizabeth; Tilgner, Hagen U. 分享 收藏
Spatial RNA-seq reveals intratumor heterogeneity and transcriptional substructure in high-grade ovarian cancers Gibbs, Lee D.; Williams, Stephen R.; Weisenfeld, Neil; Craig, David W.; Bassiouni, Rania; Delaney, Nigel F.; Silva, Diane; Yin, Yifeng; Rotimi, Solomon; Chew, Jennifer; Frey, Meghan; Webb, Michelle; Qian, Jing; Miller, Heather; Murderspach, Laila; McEachron, Troy; Roman, Lynda; Carpten, John D. 分享 收藏
Spatial RNA-seq reveals intratumor heterogeneity and transcriptional substructure in a diverse cohort of high-grade ovarian cancers Gibbs, Lee D.; Williams, Stephen R.; Weisenfeld, Neil, I; Bassiouni, Rania; Delaney, Nigel F.; Da Silva, Diane; Yin, Yifeng; Rotimi, Solomon; Chew, Jennifer; Frey, Meghan; Qian, Jing; Miller, Heather; Murderspach, Laila; McEachron, Troy; Craig, David; Roman, Lynda WOptional; Carpten, John D. 分享 收藏
Haplotyping the Vitis collinear core genome with rhAmpSeq improves marker transferability in a diverse genus Zou, Cheng; Karn, Avinash; Reisch, Bruce; Nguyen, Allen; Sun, Yongming; Bao, Yun; Campbell, Michael S.; Church, Deanna; Williams, Stephen; Xu, Xia; Ledbetter, Craig A.; Patel, Sagar; Fennell, Anne; Glaubitz, Jeffrey C.; Clark, Matthew; Ware, Doreen; Londo, Jason P.; Sun, Qi; Cadle-Davidson, Lance 分享 收藏
A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing Petti, Allegra A.; Williams, Stephen R.; Miller, Christopher A.; Fiddes, Ian T.; Srivatsari, Sridhar N.; Chen, David Y.; Fronick, Catrina C.; Fulton, Robert S.; Church, Deanna M.; Ley, Timothy J. 分享 收藏
Resolving the full spectrum of human genome variation using Linked-Reads Marks, Patrick; Garcia, Sarah; Barrio, Alvaro Martinez; Belhocine, Kamila; Bernate, Jorge; Bharadwaj, Rajiv; Bjornson, Keith; Catalanotti, Claudia; Delaney, Josh; Fehr, Adrian; Fiddes, Ian T.; Galvin, Brendan; Heaton, Haynes; Herschleb, Jill; Hindson, Christopher; Holt, Esty; Jabara, Cassandra B.; Jett, Susanna; Keivanfar, Nikka; Kyriazopoulou-Panagiotopoulou, Sofia; Lek, Monkol; Lin, Bill; Lowe, Adam; Mahamdallie, Shazia; Maheshwari, Shamoni; Makarewicz, Tony; Marshall, Jamie; Meschi, Francesca; O'Keefe, Christopher J.; Ordonez, Heather; Patel, Pranav; Price, Andrew; Royall, Ariel; Ruark, Elise; Seal, Sheila; Schnall-Levin, Michael; Shah, Preyas; Stafford, David; Williams, Stephen; Wu, Indira; Xu, Andrew Wei; Rahman, Nazneen; MacArthur, Daniel; Church, Deanna M. 分享 收藏
Reference quality assembly of the 3.5-Gb genome of Capsicum annuum from a single linked-read library Hulse-Kemp, Amanda M.; Maheshwari, Shamoni; Stoffel, Kevin; Hill, Theresa A.; Jaffe, David; Williams, Stephen R.; Weisenfeld, Neil; Ramakrishnan, Srividya; Kumar, Vijay; Shah, Preyas; Schatz, Michael C.; Church, Deanna M.; Van Deynze, Allen 分享 收藏
Genetic Drivers of von Willebrand Factor Levels in an Ischemic Stroke Population and Association With Risk for Recurrent Stroke Williams, Stephen R.; Hsu, Fang-Chi; Keene, Keith L.; Chen, Wei-Min; Dzhivhuho, Godfrey; Rowles, Joe L., III; Southerland, Andrew M.; Furie, Karen L.; Rich, Stephen S.; Worrall, Bradford B.; Sale, Michele M. 分享 收藏
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