Johann A. Gagnon-Bartsch

university of california davis

17H指数

76论文数

2.5K被引数

收录论文 12

发表时间

CRISPRi screening in cultured human astrocytes uncovers distal enhancers controlling genes dysregulated in Alzheimer’s disease 培养的人星形胶质细胞中的CRISPRi筛选揭示了控制阿尔茨海默氏病失调基因的远端增强子

Nature Neuroscience

IF20

2025-12-18

OAAI

Nicole F. O. Green; Gavin J. Sutton; Javier Pérez-Burillo; Juli Wang; Samuel Bagot; Hannah G. Danon; Kieran Walsh; Akira Gokool; Samantha A. Miles; Guang Yang; Charles A. Herring; Yuheng Liang; Grant Pfundstein; Vladimir Sytnyk; Hamid Alinejad-Rokny; Ryan Lister; Joseph Rosenbluh; Johann A. Gagnon-Bartsch; Irina Voineagu

Building a theoretical foundation for combining negative controls and replicates

ANNALS OF THE INSTITUTE OF STATISTICAL MATHEMATICS

IF0.6

2025-11-01

PREAI

Jiang, Jiming; Gagnon-Bartsch, Johann A.; Speed, Terence P.

Simulated MRI Artifacts: Testing Machine Learning Failure Modes

BME FRONTIERS

IF7.7

2022-11-01

OAAI

Wang, Nicholas C.; Noll, Douglas C.; Srinivasan, Ashok; Gagnon-Bartsch, Johann; Kim, Michelle M.; Rao, Arvind

Removing unwanted variation from large-scale RNA sequencing data with PRPS 使用PRPS从大规模RNA测序数据中去除不需要的变异

NATURE BIOTECHNOLOGY

IF41.7

2022-09-15

OAAI

Molania, Ramyar; Foroutan, Momeneh; Gagnon-Bartsch, Johann A.; Gandolfo, Luke C.; Jain, Aryan; Sinha, Abhishek; Olshansky, Gavriel; Dobrovic, Alexander; Papenfuss, Anthony T.; Speed, Terence P.

Comprehensive evaluation of deconvolution methods for human brain gene expression 人脑基因表达反卷积方法的综合评价

NATURE COMMUNICATIONS

IF15.7

2022-03-15

OAAI

Sutton, Gavin J.; Poppe, Daniel; Simmons, Rebecca K.; Walsh, Kieran; Nawaz, Urwah; Lister, Ryan; Gagnon-Bartsch, Johann A.; Voineagu, Irina

Social Media as an Alternative to Surveys of Opinions About the Economy

computer science review

IF2.7

2019-09-26

PREAI

Conrad, Frederick G.; Gagnon-Bartsch, Johann A.; Ferg, Robyn A.; Schober, Michael F.; Pasek, Josh; Hou, Elizabeth

A new normalization for Nanostring nCounter gene expression data Nanostring nCounter基因表达数据的一种新的归一化方法

NUCLEIC ACIDS RESEARCH

IF13.1

2019-05-22

OAAI

Molania, Ramyar; Gagnon-Bartsch, Johann A.; Dobrovic, Alexander; Speed, Terence P.

scMerge leverages factor analysis, stable expression, and pseudoreplication to merge multiple single-cell RNA-seq datasets scMerge利用因子分析，稳定表达和假复制来合并多个单细胞rna-seq数据集

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2019-04-26

106

OAAI

Lin, Yingxin; Ghazanfar, Shila; Wang, Kevin Y. X.; Gagnon-Bartsch, Johann A.; Lo, Kitty K.; Su, Xianbin; Han, Ze-Guang; Ormerod, John T.; Speed, Terence P.; Yang, Pengyi; Yang, Jean Yee Hwa

The LOOP Estimator: Adjusting for Covariates in Randomized Experiments 循环估计器: 调整随机实验中的协变量

EVALUATION REVIEW

IF3.7

2018-11-15

OAAI

Wu, Edward; Gagnon-Bartsch, Johann A.

Skeletal muscle and plasma lipidomic signatures of insulin resistance and overweight/obesity in humans 人类胰岛素抵抗和超重/肥胖的骨骼肌和血浆脂质组学特征

OBESITY

IF4.7

2016-02-24

149

OAAI

Tonks, Katherine T.; Coster, Adelle C. F.; Christopher, Michael J.; Chaudhuri, Rima; Xu, Aimin; Gagnon-Bartsch, Johann; Chisholm, Donald J.; James, David E.; Meikle, Peter J.; Greenfield, Jerry R.; Samocha-Bonet, Dorit

Removing unwanted variation in a differential methylation analysis of Illumina HumanMethylation450 array data

NUCLEIC ACIDS RESEARCH

IF13.1

2015-05-18

OAAI

Maksimovic, Jovana; Gagnon-Bartsch, Johann A.; Speed, Terence P.; Oshlack, Alicia

Statistical Methods for Handling Unwanted Variation in Metabolomics Data

ANALYTICAL CHEMISTRY

IF6.7

2015-03-06

143

OAAI

De Livera, Alysha M.; Sysi-Aho, Marko; Jacob, Laurent; Gagnon-Bartsch, Johann A.; Castillo, Sandra; Simpson, Julie A.; Speed, Terence P.

研究方向