Robert W. Cottingham - Publications, H-index & Citations

Robert W. Cottingham

Lawrence Berkeley National Laboratory

21H指数

50论文数

5.4K被引数

收录论文 7

发表时间

KBase: Open-source platform for collaborative biological data analysis and publication

Journal of Molecular Biology

IF4.5

2026-02-05

OAAI

Elisha M. Wood-Charlson; Christopher Henry; Paramvir Dehal; Gazi Mahmud; Ben Allen; Kathleen Bielsmith; D.Dakota Blair; Shane Canon; Mikaela Cashman; Dylan Chivian; Robert Cottingham; Zach Crocket; Ellen Dow; Meghan Drake; Janaka N. Edirisinghe; José P. Faria; Andrew Freiburger; Tianhao Gu; Prachi Gupta; AJ Ireland

Metagenome-assembled genome extraction and analysis from microbiomes using KBase (vol 1350, pg 32, 2022)

NATURE PROTOCOLS

IF16

2022-11-30

OAAI

Chivian, Dylan; Jungbluth, Sean P.; Dehal, Paramvir S.; Wood-Charlson, Elisha M.; Canon, Richard S.; Allen, Benjamin H.; Clark, Mikayla M.; Gu, Tianhao; Land, Miriam L.; Price, Gavin A.; Riehl, William J.; Sneddon, Michael W.; Sutormin, Roman; Zhang, Qizhi; Cottingham, Robert W.; Henry, Chris S.; Arkin, Adam P.

Metagenome-assembled genome extraction and analysis from microbiomes using KBase

NATURE PROTOCOLS

IF16

2022-11-14

OAAI

NUCLEIC ACIDS RESEARCH

IF13.1

2020-11-12

OAAI

Seaver, Samuel M. D.; Liu, Filipe; Zhang, Qizhi; Jeffryes, James; Faria, Jose P.; Edirisinghe, Janaka N.; Mundy, Michael; Chia, Nicholas; Noor, Elad; Beber, Moritz E.; Best, Aaron A.; DeJongh, Matthew; Kimbrel, Jeffrey A.; D'haeseleer, Patrik; McCorkle, Sean R.; Bolton, Jay R.; Pearson, Erik; Canon, Shane; Wood-Charlson, Elisha M.; Cottingham, Robert W.; Arkin, Adam P.; Henry, Christopher S.

The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes 用于整合代谢注释的ModelSEED生物化学数据库以及植物，真菌和微生物代谢模型的重建，比较和分析

NUCLEIC ACIDS RESEARCH

IF13.1

2020-09-28

134

OAAI

KBase: The United States Department of Energy Systems Biology Knowledgebase

NATURE BIOTECHNOLOGY

IF41.7

2018-07-06

928

OAAI

Arkin, Adam P.; Cottingham, Robert W.; Henry, Christopher S.; Harris, Nomi L.; Stevens, Rick L.; Maslov, Sergei; Dehal, Paramvir; Ware, Doreen; Perez, Fernando; Canon, Shane; Sneddon, Michael W.; Henderson, Matthew L.; Riehl, William J.; Murphy-Olson, Dan; Chan, Stephen Y.; Kamimura, Roy T.; Kumari, Sunita; Drake, Meghan M.; Brettin, Thomas S.; Glass, Elizabeth M.; Chivian, Dylan; Gunter, Dan; Weston, David J.; Allen, Benjamin H.; Baumohl, Jason; Best, Aaron A.; Bowen, Ben; Brenner, Steven E.; Bun, Christopher C.; Chandonia, John-Marc; Chia, Jer-Ming; Colasanti, Ric; Conrad, Neal; Davis, James J.; Davison, Brian H.; DeJongh, Matthew; Devoid, Scott; Dietrich, Emily; Dubchak, Inna; Edirisinghe, Janaka N.; Fang, Gang; Faria, Jose P.; Frybarger, Paul M.; Gerlach, Wolfgang; Gerstein, Mark; Greiner, Annette; Gurtowski, James; Haun, Holly L.; He, Fei; Jain, Rashmi; Joachimiak, Marcin P.; Keegan, Kevin P.; Kondo, Shinnosuke; Kumar, Vivek; Land, Miriam L.; Meyer, Folker; Mills, Marissa; Novichkov, Pavel S.; Oh, Taeyun; Olsen, Gary J.; Olson, Robert; Parrello, Bruce; Pasternak, Shiran; Pearson, Erik; Poon, Sarah S.; Price, Gavin A.; Ramakrishnan, Srividya; Ranjan, Priya; Ronald, Pamela C.; Schatz, Michael C.; Seaver, Samuel M. D.; Shukla, Maulik; Sutormin, Roman A.; Syed, Mustafa H.; Thomason, James; Tintle, Nathan L.; Wang, Daifeng; Xia, Fangfang; Yoo, Hyunseung; Yoo, Shinjae; Yu, Dantong

The GDB(TM) Human Genome Database Anno 1997

NUCLEIC ACIDS RESEARCH

IF13.1

1997-01-01

OAAI

Fasman, KH; Letovsky, SI; Li, P; Cottingham, RW; Kingsbury, DT

研究方向