未登录 Capacity of a Microbial Synbiotic To Rescue the In Vitro Metabolic Activity of the Gut Microbiome following Perturbation with Alcohol or Antibiotics 微生物合生素在酒精或抗生素扰动后拯救肠道微生物组体外代谢活性的能力 Tierney, Braden T.; Van den Abbeele, Pieter; Al-Ghalith, Gabriel A.; Verstrepen, Lynn; Ghyselinck, Jonas; Calatayud, Marta; Marzorati, Massimo; Gadir, Azza A.; Daisley, Brendan; Reid, Gregor; Bron, Peter A.; Gevers, Dirk; Dhir, Raja; Simmons, Sheri L. 分享 收藏
Functional response to a microbial synbiotic in the gastrointestinal system of children: a randomized clinical trial Tierney, Braden T.; Versalovic, James; Fasano, Alessio; Petrosino, Joseph F.; Chumpitazi, Bruno P.; Mayer, Emeran A.; Boetes, Jared; Smits, Gerard; Parkar, Shanthi G.; Voreades, Noah; Kartal, Ece; Al-Ghalith, Gabriel A.; Pane, Marco; Bron, Peter A.; Reid, Gregor; Dhir, Raja; Mason, Christopher E. 分享 收藏
Heuristic and Hierarchical-Based Population Mining of Salmonella enterica Lineage I Pan-Genomes as a Platform to Enhance Food Safety Gomes-Neto, Joao Carlos; Pavlovikj, Natasha; Cano, Carmen; Abdalhamid, Baha; Al-Ghalith, Gabriel Asad; Loy, John Dustin; Knights, Dan; Iwen, Peter C.; Chaves, Byron D.; Benson, Andrew K. 分享 收藏
Wild primate microbiomes prevent weight gain in germ-free mice Sidiropoulos, Dimitrios N.; Al-Ghalith, Gabriel A.; Shields-Cutler, Robin R.; Ward, Tonya L.; Johnson, Abigail J.; Vangay, Pajau; Knights, Dan; Kashyap, Purna C.; Xian, Yibo; Ramer-Tait, Amanda E.; Clayton, Jonathan B. 分享 收藏
Distribution of Bacterial α1,3-Galactosyltransferase Genes in the Human Gut Microbiome Montassier, Emmanuel; Al-Ghalith, Gabriel A.; Mathe, Camille; Le Bastard, Quentin; Douillard, Venceslas; Garnier, Abel; Guimon, Remi; Raimondeau, Bastien; Touchefeu, Yann; Duchalais, Emilie; Vince, Nicolas; Limou, Sophie; Gourraud, Pierre-Antoine; Laplaud, David A.; Nicot, Arnaud B.; Soulillou, Jean-Paul; Berthelot, Laureline 分享 收藏
Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea Zhu, Qiyun; Mai, Uyen; Pfeiffer, Wayne; Janssen, Stefan; Asnicar, Francesco; Sanders, Jon G.; Belda-Ferre, Pedro; Al-Ghalith, Gabriel A.; Kopylova, Evguenia; McDonald, Daniel; Kosciolek, Tomasz; Yin, John B.; Huang, Shi; Salam, Nimaichand; Jiao, Jian-Yu; Wu, Zijun; Xu, Zhenjiang Z.; Cantrell, Kalen; Yang, Yimeng; Sayyari, Erfan; Rabiee, Maryam; Morton, James T.; Podell, Sheila; Knights, Dan; Li, Wen-Jun; Huttenhower, Curtis; Segata, Nicola; Smarr, Larry; Mirarab, Siavash; Knight, Rob 分享 收藏
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 (vol 37, pg 852, 2019) 使用QIIME 2的可重复、交互式、可扩展和可扩展的微生物组数据科学 (第37卷，852页，2019页) Bolyen, Evan; Rideout, Jai Ram; Dillon, Matthew R.; Bokulich, Nicholas A.; Abnet, Christian C.; Al-Ghalith, Gabriel A.; Alexander, Harriet; Alm, Eric J.; Arumugam, Manimozhiyan; Asnicar, Francesco; Bai, Yang; Bisanz, Jordan E.; Bittinger, Kyle; Brejnrod, Asker; Brislawn, Colin J.; Brown, C. Titus; Callahan, Benjamin J.; Caraballo-Rodriguez, Andres Mauricio; Chase, John; Cope, Emily K.; Da Silva, Ricardo; Diener, Christian; Dorrestein, Pieter C.; Douglas, Gavin M.; Durall, Daniel M.; Duvallet, Claire; Edwardson, Christian F.; Ernst, Madeleine; Estaki, Mehrbod; Fouquier, Jennifer; Gauglitz, Julia M.; Gibbons, Sean M.; Gibson, Deanna L.; Gonzalez, Antonio; Gorlick, Kestrel; Guo, Jiarong; Hillmann, Benjamin; Holmes, Susan; Holste, Hannes; Huttenhower, Curtis; Huttley, Gavin A.; Janssen, Stefan; Jarmusch, Alan K.; Jiang, Lingjing; Kaehler, Benjamin D.; Bin Kang, Kyo; Keefe, Christopher R.; Keim, Paul; Kelley, Scott T.; Knights, Dan; Koester, Irina; Kosciolek, Tomasz; Kreps, Jorden; Langille, Morgan G. I.; Lee, Joslynn; Ley, Ruth; Liu, Yong-Xin; Loftfield, Erikka; Lozupone, Catherine; Maher, Massoud; Marotz, Clarisse; Martin, Bryan D.; McDonald, Daniel; McIver, Lauren J.; Melnik, Alexey V.; Metcalf, Jessica L.; Morgan, Sydney C.; Morton, Jamie T.; Naimey, Ahmad Turan; Navas-Molina, Jose A.; Nothias, Louis Felix; Orchanian, Stephanie B.; Pearson, Talima; Peoples, Samuel L.; Petras, Daniel; Preuss, Mary Lai; Pruesse, Elmar; Rasmussen, Lasse Buur; Rivers, Adam; Robeson, Michael S., II; Rosenthal, Patrick; Segata, Nicola; Shaffer, Michael; Shiffer, Arron; Sinha, Rashmi; Song, Se Jin; Spear, John R.; Swafford, Austin D.; Thompson, Luke R.; Torres, Pedro J.; Trinh, Pauline; Tripathi, Anupriya; Turnbaugh, Peter J.; Ul-Hasan, Sabah; van der Hooft, Justin J. J.; Vargas, Fernando; Vazquez-Baeza, Yoshiki; Vogtmann, Emily; von Hippel, Max; Walters, William; Walters, William; Wan, Yunhu; Wang, Mingxun; Warren, Jonathan; Weber, Kyle C.; Williamson, Charles H. D.; Willis, Amy D.; Xu, Zhenjiang Zech; Zaneveld, Jesse R.; Zhang, Yilong; Zhu, Qiyun; Knight, Rob; Caporaso, J. Gregory 分享 收藏
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 使用QIIME 2的可重复、交互式、可扩展和可扩展的微生物组数据科学 Bolyen, Evan; Rideout, Jai Ram; Dillon, Matthew R.; Bokulich, NicholasA.; Abnet, Christian C.; Al-Ghalith, Gabriel A.; Alexander, Harriet; Alm, Eric J.; Arumugam, Manimozhiyan; Asnicar, Francesco; Bai, Yang; Bisanz, Jordan E.; Bittinger, Kyle; Brejnrod, Asker; Brislawn, Colin J.; Brown, C. Titus; Callahan, Benjamin J.; Caraballo-Rodriguez, Andres Mauricio; Chase, John; Cope, Emily K.; Da Silva, Ricardo; Diener, Christian; Dorrestein, Pieter C.; Douglas, Gavin M.; Durall, Daniel M.; Duvallet, Claire; Edwardson, Christian F.; Ernst, Madeleine; Estaki, Mehrbod; Fouquier, Jennifer; Gauglitz, Julia M.; Gibbons, Sean M.; Gibson, Deanna L.; Gonzalez, Antonio; Gorlick, Kestrel; Guo, Jiarong; Hillmann, Benjamin; Holmes, Susan; Holste, Hannes; Huttenhower, Curtis; Huttley, Gavin A.; Janssen, Stefan; Jarmusch, Alan K.; Jiang, Lingjing; Kaehler, Benjamin D.; Bin Kang, Kyo; Keefe, Christopher R.; Keim, Paul; Kelley, Scott T.; Knights, Dan; Koester, Irina; Kosciolek, Tomasz; Kreps, Jorden; Langille, Morgan G. I.; Lee, Joslynn; Ley, Ruth; Liu, Yong-Xin; Loftfield, Erikka; Lozupone, Catherine; Maher, Massoud; Marotz, Clarisse; Martin, Bryan D.; McDonald, Daniel; McIver, Lauren J.; Melnik, Alexey V.; Metcalf, Jessica L.; Morgan, Sydney C.; Morton, Jamie T.; Naimey, Ahmad Turan; Navas-Molina, Jose A.; Nothias, Louis Felix; Orchanian, Stephanie B.; Pearson, Talima; Peoples, Samuel L.; Petras, Daniel; Preuss, Mary Lai; Pruesse, Elmar; Rasmussen, Lasse Buur; Rivers, Adam; Robeson, Michael S., II; Rosenthal, Patrick; Segata, Nicola; Shaffer, Michael; Shiffer, Arron; Sinha, Rashmi; Song, Se Jin; Spear, John R.; Swafford, Austin D.; Thompson, Luke R.; Torres, Pedro J.; Trinh, Pauline; Tripathi, Anupriya; Turnbaugh, Peter J.; Ul-Hasan, Sabah; vander Hooft, Justin J. J.; Vargas, Fernando; Vazquez-Baeza, Yoshiki; Vogtmann, Emily; von Hippel, Max; Walters, William; Wan, Yunhu; Wang, Mingxun; Warren, Jonathan; Weber, Kyle C.; Williamson, Charles H. D.; Willis, Amy D.; Xu, Zhenjiang Zech; Zaneveld, Jesse R.; Zhang, Yilong; Zhu, Qiyun; Knight, Rob; Caporaso, J. Gregory 分享 收藏
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Antibiotic-induced acceleration of type 1 diabetes alters maturation of innate intestinal immunity Zhang, Xue-Song; Li, Jackie; Krautkramer, Kimberly A.; Badri, Michelle; Battaglia, Thomas; Borbet, Timothy C.; Koh, Hyunwook; Ng, Sandy; Sibley, Rachel A.; Li, Yuanyuan; Pathmasiri, Wimal; Jindal, Shawn; Shields-Cutler, Robin R.; Hillmann, Ben; Al-Ghalith, Gabriel A.; Ruiz, Victoria E.; Livanos, Alexandra; van't Wout, Angelique B.; Nagalingam, Nabeetha; Rogers, Arlin B.; Sumner, Susan Jenkins; Knights, Dan; Denu, John M.; Li, Huilin; Ruggles, Kelly V.; Bonneau, Richard; Williamson, R. Anthony; Rauch, Marcus; Blaser, Martin J. 分享 收藏
Associations Between Nutrition, Gut Microbiome, and Health in A Novel Nonhuman Primate Model Clayton, Jonathan B.; Al-Ghalith, Gabriel A.; Ha Thang Long; Bui Van Tuan; Cabana, Francis; Huang, Hu; Vangay, Pajau; Ward, Tonya; Vo Van Minh; Nguyen Ai Tam; Nguyen Tat Dat; Travis, Dominic A.; Murtaugh, Michael P.; Covert, Herbert; Glander, Kenneth E.; Nadler, Tilo; Toddes, Barbara; Sha, John C. M.; Singer, Randy; Knights, Dan; Johnson, Timothy J. 分享 收藏
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Captivity humanizes the primate microbiome 囚禁使灵长类动物微生物组人性化 Clayton, Jonathan B.; Vangay, Pajau; Hu Huang; Ward, Tonya; Hillmann, Benjamin M.; Al-Ghalith, Gabriel A.; Travis, Dominic A.; Ha Thang Long; Bui Van Tuan; Vo Van Minh; Cabana, Francis; Nadler, Tilo; Toddes, Barbara; Murphy, Tami; Glander, Kenneth E.; Johnson, Timothy J.; Knights, Dan 分享 收藏
Chemotherapy-driven dysbiosis in the intestinal microbiome Montassier, E.; Gastinne, T.; Vangay, P.; Al-Ghalith, G. A.; des Varannes, S. Bruley; Massart, S.; Moreau, P.; Potel, G.; de La Cochetiere, M. F.; Batard, E.; Knights, D. 分享 收藏
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