返回
V
Vsevolod J. Makeev
russian academy of sciences
37H指数
206论文数
9.5K被引数
收录论文 38
发表时间
- 发表时间
- IF
- 被引数
An expanded codebook of human transcription factor DNA-binding specificity人类转录因子DNA结合特异性的扩展编码本
Nature
2026-08-05
0
OAAI
Arttu Jolma; Kaitlin U. Laverty; Ali Fathi; Ally W. H. Yang; Isaac Yellan; Ilya E. Vorontsov; Antoni J. Gralak; Judith F. Kribelbauer-Swietek; Sachi Inukai; Rozita Razavi; Mihai Albu; Alexander Brechalov; Zain M. Patel; Vladimir Nozdrin; Georgy Meshcheryakov; Andrey Buyan; Ivan Kozin; Sergey Abramov; Alexandr Boytsov; Quaid Morris; Matthew T. Weirauch; Oriol Fornes; Vsevolod J. Makeev; Jan Grau; Ivo Grosse; Philipp Bucher; Bart Deplancke; Ivan V. Kulakovskiy; Timothy R. Hughes
IF48.5
Cross-platform motif discovery and benchmarking to explore binding specificities of poorly studied human transcription factors跨平台基序发现与基准测试,以探索研究较少的人类转录因子的结合特异性
2025-11-07
0
OAAI
Ilya E. Vorontsov; Ivan Kozin; Sergey Abramov; Alexandr Boytsov; Arttu Jolma; Mihai Albu; Giovanna Ambrosini; Katerina Faltejskova; Antoni J. Gralak; Nikita Gryzunov; Sachi Inukai; Semyon Kolmykov; Pavel Kravchenko; Judith F. Kribelbauer-Swietek; Kaitlin U. Laverty; Vladimir Nozdrin; Zain M. Patel; Dmitry Penzar; Marie-Luise Plescher; Sara E. Pour; Rozita Razavi; Ally W. H. Yang; Ivan Yevshin; Arsenii Zinkevich; Matthew T. Weirauch; Philipp Bucher; Bart Deplancke; Oriol Fornes; Jan Grau; Ivo Grosse; Fedor A. Kolpakov; Vsevolod J. Makeev; Timothy R. Hughes; Ivan V. Kulakovskiy
Exclusive functional signatures for gene annotation with vast OpenOrd layout使用广泛的OpenOrd布局进行基因注释的专属功能特征
2025-09-29
0
OAAI
Buzanov, Gleb; Makeev, Vsevolod
Functional characterization of the ATOH1 molecular subtype indicates a pro-metastatic role in small cell lung cancerATOH1分子亚型的功能表征表明其在小细胞肺癌中具有促转移作用。
CELL REPORTS
2025-05-01
0
Catozzi, Alessia; Pages, Maria Peiris; Humphrey, Sam; Revill, Mitchell; Morgan, Derrick; Roebuck, Jordan; Chen, Yitao; Davies-Williams, Bethan; Brennan, Kevin; Hossain, A. S. Md. Mukarram; Makeev, Vsevolod J.; Satia, Karishma; Sfyri, Pagona P.; Galvin, Melanie; Coles, Darryl; Lallo, Alice; Pearce, Simon P.; Kerr, Alastair; Priest, Lynsey; Foy, Victoria; Carter, Mathew; Caeser, Rebecca; Chan, Joseph M.; Rudin, Charles M.; Blackhall, Fiona; Frese, Kristopher K.; Dive, Caroline; Simpson, Kathryn L.
IF6.9
PREAI
A new cancer/testis long noncoding RNA, the OTP-AS1 RNA (vol 14, 28676, 2024)一种新的癌/睾丸长非编码RNA,OTP-AS1 RNA(卷14,28676,2024)
SCIENTIFIC REPORTS
2025-04-23
0
OAAI
Karnaukhova, Iuliia K.; Polev, Dmitrii E.; Krukovskaya, Larisa L.; Makashov, Andrei A.; Masharsky, Alexey E.; Nazarenko, Olga V.; Poverennaya, Irina V.; Makeev, Vsevolod J.; Akulova, Ekaterina B.; Kozlov, Andrei P.
IF3.9
Statistical framework for calling allelic imbalance in high-throughput sequencing data高通量测序数据中检测等位基因失衡的统计框架
NATURE COMMUNICATIONS
2025-02-18
0
OAAI
Buyan, Andrey; Meshcheryakov, Georgy; Safronov, Viacheslav; Abramov, Sergey; Boytsov, Alexandr; Nozdrin, Vladimir; Baulin, Eugene F.; Kolmykov, Semyon; Vierstra, Jeff; Kolpakov, Fedor; Makeev, Vsevolod J.; Kulakovskiy, Ivan V.
IF15.7
A new cancer/testis long noncoding RNA, the OTP-AS1 RNA
SCIENTIFIC REPORTS
2024-11-19
0
OAAI
Karnaukhova, Iuliia K.; Polev, Dmitrii E.; Krukovskaya, Larisa L.; Makashov, Andrei A.; Masharsky, Alexey E.; Nazarenko, Olga V.; Poverennaya, Irina V.; Makeev, Vsevolod J.; Akulova, Ekaterina B.; Kozlov, Andrei P.
IF3.9
CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methodsCAGI,基因组解释的关键评估,建立了计算遗传变异解释方法的进展和前景
GENOME BIOLOGY
2024-02-22
10
OAAI
Jain, Shantanu; Bakolitsa, Constantina; Brenner, Steven E.; Radivojac, Predrag; Moult, John; Repo, Susanna; Hoskins, Roger A.; Andreoletti, Gaia; Barsky, Daniel; Chellapan, Ajithavalli; Chu, Hoyin; Dabbiru, Navya; Kollipara, Naveen K.; Ly, Melissa; Neumann, Andrew J.; Pal, Lipika R.; Odell, Eric; Pandey, Gaurav; Peters-Petrulewicz, Robin C.; Srinivasan, Rajgopal; Yee, Stephen F.; Yeleswarapu, Sri Jyothsna; Zuhl, Maya; Adebali, Ogun; Patra, Ayoti; Beer, Michael A.; Hosur, Raghavendra; Peng, Jian; Bernard, Brady M.; Berry, Michael; Dong, Shengcheng; Boyle, Alan P.; Adhikari, Aashish; Chen, Jingqi; Hu, Zhiqiang; Wang, Robert; Wang, Yaqiong; Miller, Maximilian; Wang, Yanran; Bromberg, Yana; Turina, Paola; Capriotti, Emidio; Han, James J.; Ozturk, Kivilcim; Carter, Hannah; Babbi, Giulia; Bovo, Samuele; Di Lena, Pietro; Martelli, Pier Luigi; Savojardo, Castrense; Casadio, Rita; Cline, Melissa S.; De Baets, Greet; Bonache, Sandra; Diez, Orland; Gutierrez-Enriquez, Sara; Fernandez, Alejandro; Montalban, Gemma; Ootes, Lars; Ozkan, Selen; Padilla, Natalia; Riera, Casandra; De la Cruz, Xavier; Diekhans, Mark; Huwe, Peter J.; Wei, Qiong; Xu, Qifang; Dunbrack, Roland L.; Gotea, Valer; Elnitski, Laura; Margolin, Gennady; Fariselli, Piero; Kulakovskiy, Ivan V.; Makeev, Vsevolod J.; Penzar, Dmitry D.; Vorontsov, Ilya E.; Favorov, Alexander V.; Forman, Julia R.; Hasenahuer, Marcia; Fornasari, Maria S.; Parisi, Gustavo; Avsec, Ziga; Celik, Muhammed H.; Thi Yen Duong Nguyen; Gagneur, Julien; Shi, Fang-Yuan; Edwards, Matthew D.; Guo, Yuchun; Tian, Kevin; Zeng, Haoyang; Gifford, David K.; Goke, Jonathan; Zaucha, Jan; Gough, Julian; Ritchie, Graham R. S.; Frankish, Adam; Mudge, Jonathan M.; Harrow, Jennifer; Young, Erin L.; Yu, Yao; Huff, Chad D.; Murakami, Katsuhiko; Nagai, Yoko; Imanishi, Tadashi; Mungall, Christopher J.; Jacobsen, Julius O. B.; Kim, Dongsup; Jeong, Chan-Seok; Jones, David T.; Li, Mulin Jun; Guthrie, Violeta Beleva; Bhattacharya, Rohit; Chen, Yun-Ching; Douville, Christopher; Fan, Jean; Kim, Dewey; Masica, David; Niknafs, Noushin; Sengupta, Sohini; Tokheim, Collin; Turner, Tychele N.; Yeo, Hui Ting Grace; Karchin, Rachel; Shin, Sunyoung; Welch, Rene; Keles, Sunduz; Li, Yue; Kellis, Manolis; Corbi-Verge, Carles; Strokach, Alexey V.; Kim, Philip M.; Klein, Teri E.; Mohan, Rahul; Sinnott-Armstrong, Nicholas A.; Wainberg, Michael; Kundaje, Anshul; Gonzaludo, Nina; Mak, Angel C. Y.; Chhibber, Aparna; Lam, Hugo Y. K.; Dahary, Dvir; Fishilevich, Simon; Lancet, Doron; Lee, Insuk; Bachman, Benjamin; Katsonis, Panagiotis; Lua, Rhonald C.; Wilson, Stephen J.; Lichtarge, Olivier; Bhat, Rajendra R.; Sundaram, Laksshman; Viswanath, Vivek; Bellazzi, Riccardo; Nicora, Giovanna; Rizzo, Ettore; Limongelli, Ivan; Mezlini, Aziz M.; Chang, Ray; Kim, Serra; Lai, Carmen; O'Connor, Robert; Topper, Scott; van den Akker, Jeroen; Zhou, Alicia Y.; Zimmer, Anjali D.; Mishne, Gilad; Bergquist, Timothy R.; Breese, Marcus R.; Guerrero, Rafael F.; Jiang, Yuxiang; Kiga, Nikki; Li, Biao; Mort, Matthew; Pagel, Kymberleigh A.; Pejaver, Vikas; Stamboulian, Moses H.; Thusberg, Janita; Mooney, Sean D.; Teerakulkittipong, Nuttinee; Cao, Chen; Kundu, Kunal; Yin, Yizhou; Yu, Chen-Hsin; Kleyman, Michael; Lin, Chiao-Feng; Stackpole, Mary; Mount, Stephen M.; Eraslan, Gokcen; Mueller, Nikola S.; Naito, Tatsuhiko; Rao, Aliz R.; Azaria, Johnathan R.; Brodie, Aharon; Ofran, Yanay; Garg, Aditi; Pal, Debnath; Hawkins-Hooker, Alex; Kenlay, Henry; Reid, John; Mucaki, Eliseos J.; Rogan, Peter K.; Schwarz, Jana M.; Searls, David B.; Lee, Gyu Rie; Seok, Chaok; Kramer, Andreas; Shah, Sohela; Huang, ChengLai V.; Kirsch, Jack F.; Shatsky, Maxim; Cao, Yue; Chen, Haoran; Karimi, Mostafa; Moronfoye, Oluwaseyi; Sun, Yuanfei; Shen, Yang; Shigeta, Ron; Ford, Colby T.; Nodzak, Conor; Uppal, Aneeta; Shi, Xinghua; Joseph, Thomas; Kotte, Sujatha; Rana, Sadhna; Rao, Aditya; Saipradeep, V. G.; Sivadasan, Naveen; Sunderam, Uma; Stanke, Mario; Su, Andrew; Adzhubey, Ivan; Jordan, Daniel M.; Sunyaev, Shamil; Rousseau, Frederic; Schymkowitz, Joost; Van Durme, Joost; Tavtigian, Sean V.; Carraro, Marco; Giollo, Manuel; Tosatto, Silvio C. E.; Adato, Orit; Carmel, Liran; Cohen, Noa E.; Fenesh, Izila; Holtzer, Iamar; Juven-Gershon, Tamar; Unger, Ron; Niroula, Abhishek; Olatubosun, Ayodeji; Valiaho, Jouni; Yang, Yang; Vihinen, Mauno; Wahl, Mary E.; Chang, Billy; Chong, Ka Chun; Hu, Inchi; Sun, Rui; Wu, William Ka Kei; Xia, Xiaoxuan; Zee, Benny C.; Wang, Maggie H.; Wang, Meng; Wu, Chunlei; Lu, Yutong; Chen, Ken; Yang, Yuedong; Yates, Christopher M.; Kreimer, Anat; Yan, Zhongxia; Yosef, Nir; Zhao, Huying; Wei, Zhipeng; Yao, Zhaomin; Zhou, Fengfeng; Folkman, Lukas; Zhou, Yaoqi; Daneshjou, Roxana; Altman, Russ B.; Inoue, Fumitaka; Ahituv, Nadav; Arkin, Adam P.; Lovisa, Federica; Bonvini, Paolo; Bowdin, Sarah; Gianni, Stefano; Mantuano, Elide; Minicozzi, Velia; Novak, Leonore; Pasquo, Alessandra; Pastore, Annalisa; Petrosino, Maria; Puglisi, Rita; Toto, Angelo; Veneziano, Liana; Chiaraluce, Roberta; Ball, Mad P.; Bobe, Jason R.; Church, George M.; Consalvi, Valerio; Mort, Matthew; Cooper, David N.; Buckley, Bethany A.; Sheridan, Molly B.; Cutting, Garry R.; Scaini, Maria Chiara; Cygan, Kamil J.; Fredericks, Alger M.; Glidden, David T.; Neil, Christopher; Rhine, Christy L.; Fairbrother, William G.; Alontaga, Aileen Y.; Fenton, Aron W.; Matreyek, Kenneth A.; Starita, Lea M.; Fowler, Douglas M.; Loescher, Britt-Sabina; Franke, Andre; Adamson, Scott I.; Graveley, Brenton R.; Gray, Joe W.; Malloy, Mary J.; Kane, John P.; Kousi, Maria; Katsanis, Nicholas; Schubach, Max; Kircher, Martin; Tang, Paul L. F.; Kwok, Pui-Yan; Lathrop, Richard H.; Clark, Wyatt T.; Yu, Guoying K.; LeBowitz, Jonathan H.; Benedicenti, Francesco; Bettella, Elisa; Bigoni, Stefania; Cesca, Federica; Mammi, Isabella; Marino-Bus-Ije, Cristina; Milani, Donatella; Peron, Angela; Polli, Roberta; Sartori, Stefano; Stanzial, Franco; Ioldo, Irene; Turolla, Licia; Aspromonte, Maria C.; Bellini, Mariagrazia; Leonardi, Emanuela; Liu, Xiaoming; Marshall, Christian; McCombie, W. Richard; Elefanti, Lisa; Menin, Chiara; Meyn, M. Stephen; Murgia, Alessandra; Nadeau, Kari C. Y.; Neuhausen, Susan L.; Nussbaum, Robert L.; Pirooznia, Mehdi; Potash, James B.; Dimster-Denk, Dago F.; Rine, Jasper D.; Sanford, Jeremy R.; Snyder, Michael; Tavtigian, Sean V.; Cole, Alina G.; Sun, Song; Verby, Marta W.; Weile, Jochen; Roth, Frederick P.; Tewhey, Ryan; Sabeti, Pardis C.; Campagna, Joan; Refaat, Marwan M.; Wojciak, Julianne; Grubb, Soren; Schmitt, Nicole; Shendure, Jay; Spurdle, Amanda B.; Stavropoulos, Dimitri J.; Walton, Nephi A.; Zandi, Peter P.; Ziv, Elad; Burke, Wylie; Chen, Flavia; Carr, Lawrence R.; Martinez, Selena; Paik, Jodi; Harris-Wai, Julie; Yarborough, Mark; Fullerton, Stephanie M.; Koenig, Barbara A.; McInnes, Gregory; Shigaki, Dustin; Chandonia, John-Marc; Furutsuki, Mabel; Kasak, Laura; Yu, Changhua; Chen, Rui; Cline, Melissa S.; Pandey, Gaurav; Friedberg, Iddo; Getz, Gad A.; Cong, Qian; Kinch, Lisa N.; Zhang, Jing; Grishin, Nick V.; Voskanian, Alin; Kann, Maricel G.; Clark, Wyatt T.; Tran, Elizabeth; Ioannidis, Nilah M.; Hunter, Jesse M.; Udani, Rupa; Cai, Binghuang; Morgan, Alexander A.; Sokolov, Artem; Stuart, Joshua M.; Tavtigian, Sean V.; Minervini, Giovanni; Monzon, Alexander M.; Batzoglou, Serafim; Butte, Atul J.; Church, George M.; Greenblatt, Marc S.; Hart, Reece K.; Hernandez, Ryan; Hubbard, Tim J. P.; Kahn, Scott; O'Donnell-Luria, Anne; Ng, Pauline C.; Shon, John; Tavtigian, Sean V.; Veltman, Joris; Zook, Justin M.
IF9.4
HOCOMOCO in 2024: a rebuild of the curated collection of binding models for human and mouse transcription factors
NUCLEIC ACIDS RESEARCH
2023-11-16
13
OAAI
Vorontsov, Ilya E.; Eliseeva, Irina A.; Zinkevich, Arsenii; Nikonov, Mikhail; Abramov, Sergey; Boytsov, Alexandr; Kamenets, Vasily; Kasianova, Alexandra; Kolmykov, Semyon; Yevshin, Ivan S.; Favorov, Alexander; Medvedeva, Yulia A.; Jolma, Arttu; Kolpakov, Fedor; Makeev, Vsevolod J.; Kulakovskiy, Ivan, V
IF13.1
Zebrafish pigment cells develop directly from persistent highly multipotent progenitors
NATURE COMMUNICATIONS
2023-03-06
21
OAAI
Subkhankulova, Tatiana; Sosa, Karen Camargo; Uroshlev, Leonid A.; Nikaido, Masataka; Shriever, Noah; Kasianov, Artem S.; Yang, Xueyan; Rodrigues, Frederico S. L. M.; Carney, Thomas J.; Bavister, Gemma; Schwetlick, Hartmut; Dawes, Jonathan H. P.; Rocco, Andrea; Makeev, Vsevolod J.; Kelsh, Robert N.
IF15.7
A mitochondria-specific mutational signature of aging: increased rate of A > G substitutions on the heavy strand
NUCLEIC ACIDS RESEARCH
2022-09-21
11
OAAI
Mikhailova, Alina G.; Mikhailova, Alina A.; Ushakova, Kristina; Tretiakov, Evgeny O.; Iliushchenko, Dmitrii; Shamansky, Victor; Lobanova, Valeria; Kozenkov, Ivan; Efimenko, Bogdan; Yurchenko, Andrey A.; Kozenkova, Elena; Zdobnov, Evgeny M.; Makeev, Vsevolod; Yurov, Valerian; Tanaka, Masashi; Gostimskaya, Irina; Fleischmann, Zoe; Annis, Sofia; Franco, Melissa; Wasko, Kevin; Denisov, Stepan; Kunz, Wolfram S.; Knorre, Dmitry; Mazunin, Ilya; Nikolaev, Sergey; Fellay, Jacques; Reymond, Alexandre; Khrapko, Konstantin; Gunbin, Konstantin; Popadin, Konstantin
IF13.1
ANANASTRA: annotation and enrichment analysis of allele-specific transcription factor binding at SNPs
NUCLEIC ACIDS RESEARCH
2022-04-21
10
OAAI
Boytsov, Alexandr; Abramov, Sergey; Aiusheeva, Ariuna Z.; Kasianova, Alexandra M.; Baulin, Eugene; Kuznetsov, Ivan A.; Aulchenko, Yurii S.; Kolmykov, Semyon; Yevshin, Ivan; Kolpakov, Fedor; Vorontsov, Ilya E.; Makeev, Vsevolod J.; Kulakovskiy, Ivan, V
IF13.1
Cyclical fate restriction: a new view of neural crest cell fate specification周期性命运限制: 神经嵴细胞命运规范的新观点
DEVELOPMENT
2021-11-17
25
OAAI
Kelsh, Robert N.; Sosa, Karen Camargo; Farjami, Saeed; Makeev, Vsevolod; Dawes, Jonathan H. P.; Rocco, Andrea
IF3.6
Landscape of allele-specific transcription factor binding in the human genome
NATURE COMMUNICATIONS
2021-05-12
56
OAAI
Abramov, Sergey; Boytsov, Alexandr; Bykova, Daria; Penzar, Dmitry D.; Yevshin, Ivan; Kolmykov, Semyon K.; Fridman, Marina, V; Favorov, Alexander, V; Vorontsov, Ilya E.; Baulin, Eugene; Kolpakov, Fedor; Makeev, Vsevolod J.; Kulakovskiy, Ivan, V
IF15.7
GTRD: an integrated view of transcription regulation
NUCLEIC ACIDS RESEARCH
2020-11-24
145
OAAI
Kolmykov, Semyon; Yevshin, Ivan; Kulyashov, Mikhail; Sharipov, Ruslan; Kondrakhin, Yury; Makeev, Vsevolod J.; Kulakovskiy, Ivan, V; Kel, Alexander; Kolpakov, Fedor
IF13.1
A holistic view of mouse enhancer architectures reveals analogous pleiotropic effects and correlation with human disease
BMC GENOMICS
2020-11-02
3
OAAI
Sethi, Siddharth; Vorontsov, Ilya E.; Kulakovskiy, Ivan V.; Greenaway, Simon; Williams, John; Makeev, Vsevolod J.; Brown, Steve D. M.; Simon, Michelle M.; Mallon, Ann-Marie
IF3.7
Functional annotation of human long noncoding RNAs via molecular phenotyping (vol 30, pg 1060, 2020)
GENOME RESEARCH
2020-09-14
1
OAAI
Ramilowski, Jordan A.; Yip, Chi Wai; Agrawal, Saumya; Chang, Jen-Chien; Ciani, Yari; Kulakovskiy, Ivan V.; Mendez, Mickael; Ooi, Jasmine Li Ching; Ouyang, John F.; Parkinson, Nick; Petri, Andreas; Roos, Leonie; Severin, Jessica; Yasuzawa, Kayoko; Abugessaisa, Imad; Akalin, Altuna; Antonov, Ivan V.; Arner, Erik; Bonetti, Alessandro; Bono, Hidemasa; Borsari, Beatrice; Brombacher, Frank; Cameron, Christopher J. F.; Cannistraci, Carlo Vittorio; Cardenas, Ryan; Cardon, Melissa; Chang, Howard; Dostie, Josee; Ducoli, Luca; Favorov, Alexander; Fort, Alexandre; Garrido, Diego; Gil, Noa; Gimenez, Juliette; Guler, Reto; Handoko, Lusy; Harshbarger, Jayson; Hasegawa, Akira; Hasegawa, Yuki; Hashimoto, Kosuke; Hayatsu, Norihito; Heutink, Peter; Hirose, Tetsuro; Imada, Eddie L.; Itoh, Masayoshi; Kaczkowski, Bogumil; Kanhere, Aditi; Kawabata, Emily; Kawaji, Hideya; Kawashima, Tsugumi; Kelly, S. Thomas; Kojima, Miki; Kondo, Naoto; Koseki, Haruhiko; Kouno, Tsukasa; Kratz, Anton; Kurowska-Stolarska, Mariola; Kwon, Andrew Tae Jun; Leek, Jeffrey; Lennartsson, Andreas; Lizio, Marina; Lopez-Redondo, Fernando; Luginbuhl, Joachim; Maeda, Shiori; Makeev, Vsevolod J.; Marchionni, Luigi; Medvedeva, Yulia A.; Minoda, Aki; Muller, Ferenc; Munoz-Aguirre, Manuel; Murata, Mitsuyoshi; Nishiyori, Hiromi; Nitta, Kazuhiro R.; Noguchi, Shuhei; Noro, Yukihiko; Nurtdinov, Ramil; Okazaki, Yasushi; Orlando, Valerio; Paquette, Denis; Parr, Callum J. C.; Rackham, Owen J. L.; Rizzu, Patrizia; Martinez, Diego Fernando Sanchez; Sandelin, Albin; Sanjana, Pillay; Semple, Colin A. M.; Shibayama, Youtaro; Sivaraman, Divya M.; Suzuki, Takahiro; Szumowski, Suzannah C.; Tagami, Michihira; Taylor, Martin S.; Terao, Chikashi; Thodberg, Malte; Thongjuea, Supat; Tripathi, Vidisha; Ulitsky, Igor; Verardo, Roberto; Vorontsov, Ilya E.; Yamamoto, Chinatsu; Young, Robert S.; Baillie, J. Kenneth; Forrest, Alistair R. R.; Guigo, Roderic; Hoffman, Michael M.; Hon, Chung Chau; Kasukawa, Takeya; Kauppinen, Sakari; Kere, Juha; Lenhard, Boris; Schneider, Claudio; Suzuki, Harukazu; Yagi, Ken; de Hoon, Michiel J. L.; Shin, Jay W.; Carninci, Piero
IF5.5
Functional annotation of human long noncoding RNAs via molecular phenotyping
GENOME RESEARCH
2020-07-27
96
OAAI
Ramilowski, Jordan A.; Yip, Chi Wai; Agrawal, Saumya; Chang, Jen-Chien; Ciani, Yari; Kulakovskiy, Ivan V.; Mendez, Mickael; Ooi, Jasmine Li Ching; Ouyang, John F.; Parkinson, Nick; Petri, Andreas; Roos, Leonie; Severin, Jessica; Yasuzawa, Kayoko; Abugessaisa, Imad; Akalin, Altuna; Antonov, Ivan V.; Arner, Erik; Bonetti, Alessandro; Bono, Hidemasa; Borsari, Beatrice; Brombacher, Frank; Cameron, Chris J. F.; Cannistraci, Carlo Vittorio; Cardenas, Ryan; Cardon, Melissa; Chang, Howard; Dostie, Josee; Ducoli, Luca; Favorov, Alexander; Fort, Alexandre; Garrido, Diego; Gil, Noa; Gimenez, Juliette; Guler, Reto; Handoko, Lusy; Harshbarger, Jayson; Hasegawa, Akira; Hasegawa, Yuki; Hashimoto, Kosuke; Hayatsu, Norihito; Heutink, Peter; Hirose, Tetsuro; Imada, Eddie L.; Itoh, Masayoshi; Kaczkowski, Bogumil; Kanhere, Aditi; Kawabata, Emily; Kawaji, Hideya; Kawashima, Tsugumi; Kelly, S. Thomas; Kojima, Miki; Kondo, Naoto; Koseki, Haruhiko; Kouno, Tsukasa; Kratz, Anton; Kurowska-Stolarska, Mariola; Kwon, Andrew Tae Jun; Leek, Jeffrey; Lennartsson, Andreas; Lizio, Marina; Lopez-Redondo, Fernando; Luginbuhl, Joachim; Maeda, Shiori; Makeev, Vsevolod J.; Marchionni, Luigi; Medvedeva, Yulia A.; Minoda, Aki; Mueller, Ferenc; Munoz-Aguirre, Manuel; Murata, Mitsuyoshi; Nishiyori, Hiromi; Nitta, Kazuhiro R.; Noguchi, Shuhei; Noro, Yukihiko; Nurtdinov, Ramil; Okazaki, Yasushi; Orlando, Valerio; Paquette, Denis; Parr, Callum J. C.; Rackham, Owen J. L.; Rizzu, Patrizia; Martinez, Diego Fernando Sanchez; Sandelin, Albin; Sanjana, Pillay; Semple, Colin A. M.; Shibayama, Youtaro; Sivaraman, Divya M.; Suzuki, Takahiro; Szumowski, Suzannah C.; Tagami, Michihira; Taylor, Martin S.; Terao, Chikashi; Thodberg, Malte; Thongjuea, Supat; Tripathi, Vidisha; Ulitsky, Igor; Verardo, Roberto; Vorontsov, Ilya E.; Yamamoto, Chinatsu; Young, Robert S.; Baillie, J. Kenneth; Forrest, Alistair R. R.; Guigo, Roderic; Hoffman, Michael M.; Hon, Chung Chau; Kasukawa, Takeya; Kauppinen, Sakari; Kere, Juha; Lenhard, Boris; Schneider, Claudio; Suzuki, Harukazu; Yagi, Ken; de Hoon, Michiel J. L.; Shin, Jay W.; Carninci, Piero
IF5.5
Insights gained from a comprehensive all-against-all transcription factor binding motif benchmarking study从全面的全对全转录因子结合基序基准研究中获得的见解
GENOME BIOLOGY
2020-05-11
31
OAAI
Ambrosini, Giovanna; Vorontsov, Ilya; Penzar, Dmitry; Groux, Romain; Fornes, Oriol; Nikolaeva, Daria D.; Ballester, Benoit; Grau, Jan; Grosse, Ivo; Makeev, Vsevolod; Kulakovskiy, Ivan; Bucher, Philipp
IF9.4
HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysisHocomaco: 通过大规模chip-seq分析建立人类和小鼠转录因子结合模型的完整集合
NUCLEIC ACIDS RESEARCH
2017-11-11
589
OAAI
Kulakovskiy, Ivan V.; Vorontsov, Ilya E.; Yevshin, Ivan S.; Sharipov, Ruslan N.; Fedorova, Alla D.; Rumynskiy, Eugene I.; Medvedeva, Yulia A.; Magana-Mora, Arturo; Bajic, Vladimir B.; Papatsenko, Dmitry A.; Kolpakov, Fedor A.; Makeev, Vsevolod J.
IF13.1

