Megan Y. Dennis - Publications, H-index & Citations

Megan Y. Dennis

University of California, Davis

31H指数

113论文数

1.1W被引数

收录论文 26

发表时间

Single-library chromosome-scale diploid assemblies of vole genomes resolve a species-specific duplication implicated in pair bonding 单一文库染色体级别二倍体小鼷鼠基因组组装解析了与配对结合相关的物种特异性重复序列

Cell Genomics

IF9

2026-08-18

OAAI

Mohamed Abuelanin; Gulhan Kaya; Juniper A. Lake; Christine Lambert; Melody V. Wu; Kristen M. Berendzen; Jonathan Wood; Ksenia Krasheninnikova; Nancy G. Solomon; Zoe R. Donaldson; Karen L. Bales; Kerstin Howe; Jonas Korlach; Devanand Manoli; Jessica Tollkuhn; Megan Y. Dennis

Structural variation in context: mechanisms, functions and selection regimes across the tree of life 背景下的结构变异：机制、功能及选择机制在生命之树中的分布

Heredity

IF3.9

2026-03-07

PREAI

Charikleia Karageorgiou; Ellen M. Leffler; Megan Y. Dennis; Omer Gokcumen

CiFi: accurate long-read chromosome conformation capture with low-input requirements CiFi: 高精度长读长染色体构象捕获，低输入量要求

Nature Communications

IF15.7

2025-12-08

OAAI

Sean P. McGinty; Gulhan Kaya; Sheina B. Sim; Alex Makunin; Renée L. Corpuz; Michael A. Quail; Mohamed Abuelanin; Mara K. N. Lawniczak; Scott M. Geib; Jonas Korlach; Megan Y. Dennis

Human-specific gene expansions contribute to brain evolution 人类特异性的基因扩张有助于大脑进化

Cell

IF42.5

2025-07-21

PREAI

Daniela C. Soto; José M. Uribe-Salazar; Gulhan Kaya; Ricardo Valdarrago; Aarthi Sekar; Nicholas K. Haghani; Keiko Hino; Gabriana La; Natasha Ann F. Mariano; Cole Ingamells; Aidan Baraban; Zoeb Jamal; Tychele N. Turner; Eric D. Green; Sergi Simó; Gerald Quon; Aida M. Andrés; Megan Y. Dennis

m6A -mRNA Reader YTHDF2 Identified as a Potential Risk Gene in Autism With Disproportionate Megalencephaly

AUTISM RESEARCH

IF5.6

2025-01-30

OAAI

Nishizaki, Sierra S.; Haghani, Nicholas K.; La, Gabriana N.; Mariano, Natasha Ann F.; Uribe-Salazar, Jose M.; Kaya, Gulhan; Regester, Melissa; Andrews, Derek Sayre; Nordahl, Christine Wu; Amaral, David G.; Dennis, Megan Y.

Deciphering the role of structural variation in human evolution: a functional perspective

CURRENT OPINION IN GENETICS & DEVELOPMENT

IF3.6

2024-10-01

OAAI

Karageorgiou, Charikleia; Gokcumen, Omer; Dennis, Megan Y.

Transforming our understanding of species-specific gene regulation

CELL GENOMICS

IF9

2024-04-01

OAAI

Dennis, Megan Y.

Pluripotency of a founding field: rebranding developmental biology

DEVELOPMENT

IF3.6

2024-02-12

OAAI

Rogers, Crystal D.; Amemiya, Chris; Arur, Swathi; Babonis, Leslie; Barresi, Michael; Bartlett, Madelaine; Behringer, Richard; Benham-Pyle, Blair; Bergmann, Dominique; Blackman, Ben; Brown, C. Titus; Browne, Bill; Camacho, Jasmin; Chabu, Chiswili Yves; Chow, Ida; Cleaver, Ondine; Cool, Jonah; Dennis, Megan Y.; Dickinson, Alexandra Jazz; Di Talia, Stefano; Frank, Margaret; Gillmor, Stewart; Haag, Eric S.; Hariharan, Iswar; Harland, Richard; Husbands, Aman; Jerome-Majewska, Loydie; Koenig, Kristen; Labonne, Carole; Layden, Michael; Lowe, Chris; Mani, Madhav; Martik, Megan; McKown, Katelyn; Moens, Cecilia; Mosimann, Christian; Onyenedum, Joyce; Reed, Robert; Rivera, Ajna; Rokhsar, Dan; Royer, Loic; Rutaganira, Flora; Shahan, Rachel; Sinha, Neelima; Swalla, Billie; Van Norman, Jaimie M.; Wagner, Daniel E.; Wikramanayake, Athula; Zebell, Sophia; Brady, Siobhan M.

Translational Neuroscience Approaches to Understanding Autism

AMERICAN JOURNAL OF PSYCHIATRY

IF14.7

2023-04-01

PREAI

Veenstra-VanderWeele, Jeremy; O'Reilly, Kally C.; Dennis, Megan Y.; Uribe-Salazar, Jose M.; Amaral, David G.

FixItFelix: improving genomic analysis by fixing reference errors

GENOME BIOLOGY

IF9.4

2023-02-21

OAAI

Behera, Sairam; LeFaive, Jonathon; Orchard, Peter; Mahmoud, Medhat; Paulin, Luis F.; Farek, Jesse; Soto, Daniela C.; Parker, Stephen C. J.; Smith, Albert V.; Dennis, Megan Y.; Zook, Justin M.; Sedlazeck, Fritz J.

Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism

GENOME BIOLOGY

IF9.4

2022-02-16

OAAI

Zhu, Yihui; Gomez, J. Antonio; Laufer, Benjamin, I; Mordaunt, Charles E.; Mouat, Julia S.; Soto, Daniela C.; Dennis, Megan Y.; Benke, Kelly S.; Bakulski, Kelly M.; Dou, John; Marathe, Ria; Jianu, Julia M.; Williams, Logan A.; Fugon, Orangel J. Gutierrez; Walker, Cheryl K.; Ozonoff, Sally; Daniels, Jason; Grosvenor, Luke P.; Volk, Heather E.; Feinberg, Jason, I; Fallin, M. Daniele; Hertz-Picciotto, Irva; Schmidt, Rebecca J.; Yasui, Dag H.; LaSalle, Janine M.

Evaluation of CRISPR gene-editing tools in zebrafish CRISPR基因编辑工具在斑马鱼中的应用评价

BMC GENOMICS

IF3.7

2022-01-06

OAAI

Uribe-Salazar, Jose M.; Kaya, Gulhan; Sekar, Aadithya; Weyenberg, KaeChandra; Ingamells, Cole; Dennis, Megan Y.

Diverse Molecular Mechanisms Contribute to Differential Expression of Human Duplicated Genes 不同的分子机制有助于人类复制基因的差异表达

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2021-05-01

OAAI

Shew, Colin J.; Carmona-Mora, Paulina; Soto, Daniela C.; Mastoras, Mira; Roberts, Elizabeth; Rosas, Joseph; Jagannathan, Dhriti; Kaya, Gulhan; O'Geen, Henriette; Dennis, Megan Y.

Single-cell strand sequencing of a macaque genome reveals multiple nested inversions and breakpoint reuse during primate evolution

GENOME RESEARCH

IF5.5

2020-10-22

OAAI

Maggiolini, Flavia Angela Maria; Sanders, Ashley D.; Shew, Colin James; Sulovari, Arvis; Mao, Yafei; Puig, Marta; Catacchio, Claudia Rita; Dellino, Maria; Palmisano, Donato; Mercuri, Ludovica; Bitonto, Miriana; Porubsky, David; Caceres, Mario; Eichler, Evan E.; Ventura, Mario; Dennis, Megan Y.; Korbel, Jan O.; Antonacci, Francesca

Psychedelics Promote Structural and Functional Neural Plasticity

CELL REPORTS

IF6.9

2018-06-01

661

OAAI

Ly, Calvin; Greb, Alexandra C.; Cameron, Lindsay P.; Wong, Jonathan M.; Barragan, Eden, V; Wilson, Paige C.; Burbach, Kyle F.; Zarandi, Sina Soltanzadeh; Sood, Alexander; Paddy, Michael R.; Duim, Whitney C.; Dennis, Megan Y.; McAllister, A. Kimberley; Ori-McKenney, Kassandra M.; Gray, John A.; Olson, David E.

Human local adaptation of the TRPM8 cold receptor along a latitudinal cline

PLOS GENETICS

IF3.7

2018-05-03

OAAI

Key, Felix M.; Abdul-Aziz, Muslihudeen A.; Mundry, Roger; Peter, Benjamin M.; Sekar, Aarthi; D'Amato, Mauro; Dennis, Megan Y.; Schmidt, Joshua M.; Andres, Aida M.

The birth of a human-specific neural gene by incomplete duplication and gene fusion 通过不完全复制和基因融合产生人类特异性神经基因

GENOME BIOLOGY

IF9.4

2017-03-09

OAAI

Dougherty, Max L.; Nuttle, Xander; Penn, Osnat; Nelson, Bradley J.; Huddleston, John; Baker, Carl; Harshman, Lana; Duyzend, Michael H.; Ventura, Mario; Antonacci, Francesca; Sandstrom, Richard; Dennis, Megan Y.; Eichler, Evan E.

The evolution and population diversity of human-specific segmental duplications 人类特定片段重复的进化和种群多样性

NATURE ECOLOGY & EVOLUTION

IF14.5

2017-02-17

114

OAAI

Dennis, Megan Y.; Harshman, Lana; Nelson, Bradley J.; Penn, Osnat; Cantsilieris, Stuart; Huddleston, John; Antonacci, Francesca; Penewit, Kelsi; Denman, Laura; Raja, Archana; Baker, Carl; Mark, Kenneth; Malig, Maika; Janke, Nicolette; Espinoza, Claudia; Stessman, Holly A. F.; Nuttle, Xander; Hoekzema, Kendra; Lindsay-Graves, Tina A.; Wilson, Richard K.; Eichler, Evan E.

Human adaptation and evolution by segmental duplication

CURRENT OPINION IN GENETICS & DEVELOPMENT

IF3.6

2016-12-01

144

OAAI

Dennis, Megan Y.; Eichler, Evan E.

Selection on a Variant Associated with Improved Viral Clearance Drives Local, Adaptive Pseudogenization of Interferon Lambda 4 (IFNL4)

PLOS GENETICS

IF3.7

2014-10-16

OAAI

Key, Felix M.; Peter, Benjamin; Dennis, Megan Y.; Huerta-Sanchez, Emilia; Tang, Wei; Prokunina-Olsson, Ludmila; Nielsen, Rasmus; Andres, Aida M.

研究方向