Patrick J. Murphy - Publications, H-index & Citations

Patrick J. Murphy

university of rochester

35H指数

185论文数

5.3K被引数

收录论文 34

发表时间

Protocol Protocol for mapping insertion sites of Toll transgenes in zebrafish using TransTag 使用TransTag在斑马鱼中映射Toll转基因插入位点的方案

STAR PROTOCOLS

IF1.3

2025-12-01

OAAI

Wei, Xiaolu; Naidu, Vijaykumar; Schneider, Paige; Murphy, Patrick J.; Meng, Fanju W.

CUT&Tag overcomes biases of ChIP and establishes chromatin patterns for repetitive genomic loci CUT&Tag克服了ChIP的偏见，并建立了重复基因组位点的染色质模式

iScience

IF4.1

2025-10-13

OAAI

Brandon J. Park; Shan Hua; Karli D. Casler; Eric Cefaloni; Michael C. Ayers; Rahiim F. Lake; Kristin E. Murphy; Paula M. Vertino; Mitchell R. O’Connell; Patrick J. Murphy

TransTag enables simple and efficient transgene mapping in zebrafish via tagmentation TransTag通过tagmentation技术实现了简单高效的斑马鱼转基因定位。

Cell Reports Methods

IF4.5

2025-07-08

OAAI

Fanju W. Meng; Paige Schneider; Xiaolu Wei; Krishan Ariyasiri; Marnie E. Halpern; Patrick J. Murphy

Epigenetic erosion of H4K20me1 induced by inflammation drives aged stem cell ferroptosis 炎症诱导的H4K20me1表观遗传侵蚀驱动衰老干细胞的铁死亡

Nature Aging

IF19.4

2025-06-30

OAAI

Roméo S. Blanc; Nidhi Shah; Sarah Hachmer; Noah A. S. Salama; Fanju W. Meng; Alireza Mousaei; Gayatri Puri; Jeonghye Hannah Hwang; Elizabeth E. Wacker; Benjamin A. Yang; Carlos A. Aguilar; Joe V. Chakkalakal; John O. Onukwufor; Patrick J. Murphy; Laura M. Calvi; F. Jeffrey Dilworth; Robert T. Dirksen

CUT&Tag applied to zebrafish adult tail fins reveals a return of embryonic H3K4me3 patterns during regeneration

EPIGENETICS & CHROMATIN

IF3.5

2024-07-20

OAAI

Duong, Phu; Rodriguez-Parks, Anjelica; Kang, Junsu; Murphy, Patrick J.

Smad4 restricts injury-provoked biliary proliferation and carcinogenesis

DISEASE MODELS & MECHANISMS

IF3.3

2024-02-28

OAAI

Alexander, William B.; Wang, Wenjia; Hill, Margaret A.; O'Dell, Michael R.; Ruffolo, Luis I.; Guo, Bing; Jackson, Katherine M.; Ullman, Nicholas; Friedland, Scott C.; Mccall, Matthew N.; Patel, Ankit; Figueroa-Guilliani, Nathania; Georger, Mary; Belt, Brian A.; Whitney-Miller, Christa L.; Linehan, David C.; Murphy, Patrick J.; Hezel, Aram F.

Role of the histone variant H2AZ1 in memory, transcription, and alternative splicing is mediated by lysine modification

NEUROPSYCHOPHARMACOLOGY

IF7.1

2024-02-16

OAAI

Reda, Anas; Hategan, Luca A.; Mclean, Timothy A. B.; Creighton, Samantha D.; Luo, Jian Qi; Chen, Sean En Si; Hua, Shan; Winston, Stephen; Reeves, Isaiah; Padmanabhan, Aditya; Dahi, Tarkan A.; Ramzan, Firyal; Brimble, Mark A.; Murphy, Patrick J.; Walters, Brandon J.; Stefanelli, Gilda; Zovkic, Iva B.

Competition for H2A.Z underlies the developmental impacts of repetitive element de-repression

DEVELOPMENT

IF3.6

2023-11-08

OAAI

Meng, Fanju W.; Murphy, Kristin E.; Makowski, Claire E.; Delatte, Benjamin; Murphy, Patrick J.

NURF301 contributes to gypsy chromatin insulator-mediated nuclear organization

NUCLEIC ACIDS RESEARCH

IF13.1

2022-07-12

OAAI

Chen, Shue; Rosin, Leah F.; Pegoraro, Gianluca; Moshkovich, Nellie; Murphy, Patrick J.; Yu, Guoyun; Lei, Elissa P.

Subtype-Independent ANP32E Reduction During Breast Cancer Progression in Accordance with Chromatin Relaxation

BMC CANCER

IF3.4

2021-12-18

OAAI

Ruff, Garrett L.; Murphy, Kristin E.; Smith, Zachary R.; Vertino, Paula M.; Murphy, Patrick J.

The histone chaperone Anp32e regulates memory formation, transcription, and dendritic morphology by regulating steady-state H2A.Z binding in neurons

CELL REPORTS

IF6.9

2021-08-01

OAAI

Stefanelli, Gilda; Makowski, Claire E.; Brimble, Mark A.; Hall, Meaghan; Reda, Anas; Creighton, Samantha D.; Leonetti, Amanda M.; McLean, Timothy A. B.; Zakaria, Jacqueline M.; Baumbach, Jennet; Greer, Celeste B.; Davidoff, Andrew M.; Walters, Brandon J.; Murphy, Patrick J.; Zovkic, Iva B.

Rolling uphill: in vivo reacquisition of pluripotency during cranial neural crest differentiation

COMMUNICATIONS BIOLOGY

IF5.1

2021-05-20

OAAI

Meng, Fanju W.; Murphy, Patrick J.

Glucocorticoid ultradian rhythmicity differentially regulates mood and resting state networks in the human brain: A randomised controlled clinical trial6

PSYCHONEUROENDOCRINOLOGY

IF3.6

2021-02-01

OAAI

Kalafatakis, Konstantinos; Russell, Georgina M.; Ferguson, Stuart G.; Grabski, Meryem; Harmer, Catherine J.; Munafo, Marcus R.; Marchant, Nicola; Wilson, Aileen; Brooks, Jonathan C.; Thakrar, Jamini; Murphy, Patrick; Thai, Ngoc J.; Lightman, Stafford L.

Genome-wide chromatin accessibility is restricted by ANP32E

NATURE COMMUNICATIONS

IF15.7

2020-10-08

OAAI

Murphy, Kristin E.; Meng, Fanju W.; Makowski, Claire E.; Murphy, Patrick J.

NRF2 loss recapitulates heritable impacts of paternal cigarette smoke exposure NRF2损失概括了父亲香烟烟雾暴露的遗传影响

PLOS GENETICS

IF3.7

2020-06-10

OAAI

Murphy, Patrick J.; Guo, Jingtao; Jenkins, Timothy G.; James, Emma R.; Hoidal, John R.; Huecksteadt, Thomas; Broberg, Dallin S.; Hotaling, James M.; Alonso, David F.; Carrell, Douglas T.; Cairns, Bradley R.; Aston, Kenneth, I

Geldanamycin Alters Abundance and Composition of Low Molecular Weight Proteins and Multiprotein Complexes as Observed by Size Exclusion Column Chromatography

FASEB JOURNAL

IF4.2

2020-04-19

PREAI

Sherwood, Susannah; Murphy, Patrick

Maintenance of spatial gene expression by Polycomb-mediated repression after formation of a vertebrate body plan

DEVELOPMENT

IF3.6

2019-10-01

OAAI

Rougeot, Julien; Chrispijn, Naomi D.; Aben, Marco; Elurbe, Dei M.; Andralojc, Karolina M.; Murphy, Patrick J.; Jansen, Pascal W. T. C.; Vermeulen, Michiel; Cairns, Bradley R.; Kamminga, Leonie M.

HDAC6 differentially regulates autophagy in stem-like versus differentiated cancer cells

AUTOPHAGY

IF14.3

2018-12-04

OAAI

Sharif, Tanveer; Martell, Emma; Dai, Cathleen; Ghassemi-Rad, Mohammad Saleh; Hanes, Mark Robert; Murphy, Patrick J.; Margam, Nandini N.; Parmar, Hirendrasinh B.; Giacomantonio, Carman A.; Duncan, Roy; Lee, Patrick W. K.; Gujar, Shashi

Ultradian rhythmicity of plasma cortisol is necessary for normal emotional and cognitive responses in man

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2018-04-09

OAAI

Kalafatakis, K.; Russell, G. M.; Harmer, C. J.; Munafo, M. R.; Marchant, N.; Wilson, A.; Brooks, J. C.; Durant, C.; Thakrar, J.; Murphy, P.; Thai, N. J.; Lightman, S. L.

Vascular events associated with pharmacotherapy

BRITISH JOURNAL OF PSYCHIATRY

IF7.6

2018-01-02

OAAI

Murphy, P; Roche, A; Byrne, A

研究方向