Oren Avram - Publications, H-index & Citations

Oren Avram

University of California System

11H指数

37论文数

663被引数

收录论文 17

发表时间

A deep learning model for automated identification of age-related macular degeneration atrophy 基于深度学习的年龄相关性黄斑变性萎缩的自动识别模型

Graefes Archive for Clinical and Experimental Ophthalmology

IF2.3

2026-01-01

OAAI

Avram, Oren; Shwartz, Yahel; Green, Adi; Bloom, Rivka; Corradetti, Giulia; Wu, Anthony; Chen, Zeyuan Johnson; Lior, Tal Eshkoly; Durmus, Berkin; Rudas, Akos; Pal, Ravi; Rakocz, Nadav; Soylu, Ceren; Alhelaly, Mai; Boscia, Giacomo; Wykoff, Charles C.; Cannesson, Maxime; Sadda, Srinivas R.; Levy, Jaime; Halperin, Eran; Chiang, Jeffrey N.; Chowers, Itay; Tiosano, Liran

From Cuffs to Code: Machine Learning in Non-Invasive Blood Pressure Monitoring 从袖带到代码：机器学习在无创血压监测中的应用

Anaesthesia Critical Care & Pain Medicine

IF4.7

2025-11-04

OAAI

Ravi Pal; Joshua Le; Theodora Wingert; Oren Avram; null Jiayu; Aidan Adham; Patrick Schoettker; Alexandre Joosten; Maxime Cannesson

Single-cell DNA methylome and 3D genome atlas of human subcutaneous adipose tissue 单细胞DNA甲基组和人类皮下脂肪组织3D基因组图谱

Nature Genetics

IF0

2025-08-20

OAAI

Zeyuan Johnson Chen; Sankha Subhra Das; Asha Kar; Seung Hyuk T. Lee; Kevin D. Abuhanna; Marcus Alvarez; Mihir G. Sukhatme; Zitian Wang; Kyla Z. Gelev; Matthew G. Heffel; Yi Zhang; Oren Avram; Elior Rahmani; Sriram Sankararaman; Markku Laakso; Sini Heinonen; Hilkka Peltoniemi; Eran Halperin; Kirsi H. Pietiläinen; Chongyuan Luo; Päivi Pajukanta

Accurate prediction of disease-risk factors from volumetric medical scans by a deep vision model pre-trained with 2D scans

NATURE BIOMEDICAL ENGINEERING

IF26.6

2024-10-01

PREAI

Avram, Oren; Durmus, Berkin; Rakocz, Nadav; Corradetti, Giulia; An, Ulzee; Nittala, Muneeswar G.; Terway, Prerit; Rudas, Akos; Chen, Zeyuan Johnson; Wakatsuki, Yu; Hirabayashi, Kazutaka; Velaga, Swetha; Tiosano, Liran; Corvi, Federico; Verma, Aditya; Karamat, Ayesha; Lindenberg, Sophiana; Oncel, Deniz; Almidani, Louay; Hull, Victoria; Fasih-Ahmad, Sohaib; Esmaeilkhanian, Houri; Cannesson, Maxime; Wykoff, Charles C.; Rahmani, Elior; Arnold, Corey W.; Zhou, Bolei; Zaitlen, Noah; Gronau, Ilan; Sankararaman, Sriram; Chiang, Jeffrey N.; Sadda, Srinivas R.; Halperin, Eran

Inhibition of host cell division by T5 protein 008 (Hdi)

MICROBIOLOGY SPECTRUM

IF3.8

2023-12-12

OAAI

Mahata, Tridib; Molshanski-Mor, Shahar; Goren, Moran G.; Kohen-Manor, Miriam; Yosef, Ido; Avram, Oren; Salomon, Dor; Qimron, Udi

An Approximate Bayesian Computation Approach for Modeling Genome Rearrangements

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2022-10-25

OAAI

Moshe, Asher; Wygoda, Elya; Ecker, Noa; Loewenthal, Gil; Avram, Oren; Israeli, Omer; Hazkani-Covo, Einat; Pe'er, Itsik; Pupko, Tal

Phylogenetic Distribution and Evolution of Type VI Secretion System in the Genus Xanthomonas

FRONTIERS IN MICROBIOLOGY

IF4.5

2022-04-14

OAAI

Liyanapathiranage, Prabha; Wagner, Naama; Avram, Oren; Pupko, Tal; Potnis, Neha

A Probabilistic Model for Indel Evolution: Differentiating Insertions from Deletions

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2021-09-01

OAAI

Loewenthal, Gil; Rapoport, Dana; Avram, Oren; Moshe, Asher; Wygoda, Elya; Itzkovitch, Alon; Israeli, Omer; Azouri, Dana; Cartwright, Reed A.; Mayrose, Itay; Pupko, Tal

A phage mechanism for selective nicking of dUMP-containing DNA

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2021-05-31

OAAI

Mahata, Tridib; Molshanski-Mor, Shahar; Goren, Moran G.; Jana, Biswanath; Kohen-Manor, Miriam; Yosef, Ido; Avram, Oren; Pupko, Tal; Salomon, Dor; Qimron, Udi

Harnessing Machine Learning To Unravel Protein Degradation in Escherichia coli

MSYSTEMS

IF4.6

2021-02-23

OAAI

Nagar, Natan; Ecker, Noa; Loewenthal, Gil; Avram, Oren; Ben-Meir, Daniella; Biran, Dvora; Ron, Eliora; Pupko, Tal

Domain-Scan: Combinatorial Sero-Diagnosis of Infectious Diseases Using Machine Learning

FRONTIERS IN IMMUNOLOGY

IF5.9

2021-02-10

OAAI

Hada-Neeman, Smadar; Weiss-Ottolenghi, Yael; Wagner, Naama; Avram, Oren; Ashkenazy, Haim; Maor, Yaakov; Sklan, Ella H.; Shcherbakov, Dmitry; Pupko, Tal; Gershoni, Jonathan M.

COVID-19 pandemic-related lockdown: response time is more important than its strictness 新型冠状病毒肺炎大流行相关的封锁: 响应时间比其严格性更重要

EMBO MOLECULAR MEDICINE

IF8.3

2020-10-19

OAAI

Loewenthal, Gil; Abadi, Shiran; Avram, Oren; Halabi, Keren; Ecker, Noa; Nagar, Natan; Mayrose, Itay; Pupko, Tal

ModelTeller: Model Selection for Optimal Phylogenetic Reconstruction Using Machine Learning

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2020-06-25

OAAI

Abadi, Shiran; Avram, Oren; Rosset, Saharon; Pupko, Tal; Mayrose, Itay

M1CR0B1AL1Z3R-a user-friendly web server for the analysis of large-scale microbial genomics data

NUCLEIC ACIDS RESEARCH

IF13.1

2019-05-22

OAAI

Avram, Oren; Rapoport, Dana; Portugez, Shir; Pupko, Tal

ASAp - A Webserver for Immunoglobulin-Sequencing Analysis pipeline

FRONTIERS IN IMMUNOLOGY

IF5.9

2018-07-30

OAAI

Avram, Oren; Vaisman-Mentesh, Anna; Yehezkel, Dror; Ashkenazy, Haim; Pupko, Tal; Wine, Yariv

Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations

PLOS GENETICS

IF3.7

2016-09-12

143

OAAI

McNally, Alan; Oren, Yaara; Kelly, Darren; Pascoe, Ben; Dunn, Steven; Sreecharan, Tristan; Vehkala, Minna; Valimaki, Niko; Prentice, Michael B.; Ashour, Amgad; Avram, Oren; Pupko, Tal; Dobrindt, Ulrich; Literak, Ivan; Guenther, Sebastian; Schaufler, Katharina; Wieler, Lothar H.; Zong Zhiyong; Sheppard, Samuel K.; McInerney, James O.; Corander, Jukka

Inferring Indel Parameters using a Simulation-based Approach

GENOME BIOLOGY AND EVOLUTION

IF2.8

2015-11-03

OAAI

Karin, Eli Levy; Rabin, Avigayel; Ashkenazy, Haim; Shkedy, Dafna; Avram, Oren; Cartwright, Reed A.; Pupko, Tal

研究方向