Mathieu Courcelles - Publications, H-index & Citations

Mathieu Courcelles

universite de montreal

21H指数

59论文数

2.3K被引数

收录论文 27

发表时间

Non-canonical transcription and splicing shape the colorectal cancer immunopeptidome in MSI and MSS tumors 非经典转录和剪接塑造了MSI和MSS肿瘤中的结直肠癌免疫肽组

MOLECULAR & CELLULAR PROTEOMICS

IF5.5

2026-05-07

OAAI

Mathieu Courcelles; Marie-Pierre Hardy; Chantal Durette; Joel Lanoix; Robin Minati; Jean-Philippe Laverdure; Krystel Vincent; Claude Perreault; Pierre Thibault

CDK4/6 inhibition reprograms the breast cancer immunopeptidome via Rb-dependent chromatin and transcriptomic remodeling CDK4/6抑制通过Rb依赖的染色质和转录组重塑重编程乳腺癌免疫肽组

Cell Reports

IF6.9

2025-12-13

OAAI

Robin Minati; Maxime Cahuzac; Julie Perrault; Véronique Lullier; Anca Apavaloaei; Eric Bonneil; Mathieu Courcelles; Joel Lanoix; Eralda Kina; Claude Perreault; Pierre Thibault

Tumor antigens preferentially derive from unmutated genomic sequences in melanoma and non-small cell lung cancer 肿瘤抗原优先来源于黑色素瘤和非小细胞肺癌中未突变的基因组序列

NATURE CANCER

IF28.5

2025-05-22

OAAI

Apavaloaei, Anca; Zhao, Qingchuan; Hesnard, Leslie; Cahuzac, Maxime; Durette, Chantal; Larouche, Jean-David; Hardy, Marie-Pierre; Vincent, Krystel; Brochu, Sylvie; Laverdure, Jean-Philippe; Lanoix, Joel; Courcelles, Mathieu; Gendron, Patrick; Lajoie, Mathieu; Cuevas, Maria Virginia Ruiz; Kina, Eralda; Perrault, Julie; Humeau, Juliette; Ehx, Gregory; Lemieux, Sebastien; Watson, Ian R.; Speiser, Daniel E.; Bassani-Sternberg, Michal; Thibault, Pierre; Perreault, Claude

Machine learning-enhanced immunopeptidomics applied to T-cell epitope discovery for COVID-19 vaccines

NATURE COMMUNICATIONS

IF15.7

2024-11-28

OAAI

Kovalchik, Kevin A.; Hamelin, David J.; Kubiniok, Peter; Bourdin, Benoite; Mostefai, Fatima; Poujol, Raphael; Pare, Bastien; Simpson, Shawn M.; Sidney, John; Bonneil, Eric; Courcelles, Mathieu; Saini, Sunil Kumar; Shahbazy, Mohammad; Kapoor, Saketh; Rajesh, Vigneshwar; Weitzen, Maya; Grenier, Jean-Christophe; Gharsallaoui, Bayrem; Marechal, Loize; Wu, Zhaoguan; Savoie, Christopher; Sette, Alessandro; Thibault, Pierre; Sirois, Isabelle; Smith, Martin A.; Decaluwe, Helene; Hussin, Julie G.; Lavallee-Adam, Mathieu; Caron, Etienne

Investigating the role of SRC-family kinases in MPNST tumorigenesis

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Zereg, Elamine; Voisin, Laure; Grenier, Karl; Courcelles, Mathieu; Jung, Sungmi; Thibault, Pierre; Meloche, Sylvain

Breast cancer immunopeptidomes contain numerous shared tumor antigens

JOURNAL OF CLINICAL INVESTIGATION

IF13.6

2024-01-02

OAAI

Kina, Eralda; Laverdure, Jean-Philippe; Durette, Chantal; Lanoix, Joel; Courcelles, Mathieu; Zhao, Qingchuan; Apavaloaei, Anca; Larouche, Jean-David; Hardy, Marie-Pierre; Vincent, Krystel; Gendron, Patrick; Hesnard, Leslie; Theriault, Catherine; Cuevas, Maria Virginia Ruiz; Ehx, Gregory; Thibault, Pierre; Perreault, Claude

SUMO Proteomics Analyses Identify Protein Inhibitor of Activated STAT-Mediated Regulatory Networks Involved in Cell Cycle and Cell Proliferation

JOURNAL OF PROTEOME RESEARCH

IF3.6

2023-02-01

OAAI

Li, Chongyang; Boutet, Alison; Pascariu, Cristina Mirela; Nelson, Trent; Courcelles, Mathieu; Wu, Zhaoguan; Comtois-Marotte, Simon; Emery, Gregory; Thibault, Pierre

Induced pluripotent stem cells display a distinct set of MHC I-associated peptides shared by human cancers

CELL REPORTS

IF6.9

2022-08-01

OAAI

Apavaloaei, Anca; Hesnard, Leslie; Hardy, Marie-Pierre; Benabdallah, Basma; Ehx, Gregory; Theriault, Catherine; Laverdure, Jean-Philippe; Durette, Chantal; Lanoix, Joel; Courcelles, Mathieu; Noronha, Nandita; Chauhan, Kapil Dev; Lemieux, Sebastien; Beausejour, Christian; Bhatia, Mick; Thibault, Pierre; Perreault, Claude

Immunopeptidomic analyses of colorectal cancers with and without microsatellite instability

MOLECULAR & CELLULAR PROTEOMICS

IF5.5

2022-05-01

OAAI

Cleyle, Jenna; Hardy, Marie-Pierre; Minati, Robin; Courcelles, Mathieu; Durette, Chantal; Lanoix, Joel; Laverdure, Jean-Philippe; Vincent, Krystel; Perreault, Claude; Thibault, Pierre

Most non-canonical proteins uniquely populate the proteome or immunopeptidome

CELL REPORTS

IF6.9

2021-03-01

114

OAAI

Cuevas, Maria Virginia Ruiz; Hardy, Marie-Pierre; Holly, Jaroslav; Bonneil, Eric; Durette, Chantal; Courcelles, Mathieu; Lanoix, Joel; Cote, Caroline; Staudt, Louis M.; Lemieux, Sebastien; Thibault, Pierre; Perreault, Claude; Yewdell, Jonathan W.

Extending the Comprehensiveness of Immunopeptidome Analyses Using Isobaric Peptide Labeling

ANALYTICAL CHEMISTRY

IF6.7

2020-06-05

PREAI

Pfammatter, Sibylle; Bonneil, Eric; Lanoix, Joel; Vincent, Krystel; Hardy, Marie-Pierre; Courcelles, Mathieu; Perreault, Claude; Thibault, Pierre

MAPDP: A Cloud-Based Computational Platform for Immunopeptidomics Analyses

JOURNAL OF PROTEOME RESEARCH

IF3.6

2020-02-28

PREAI

Courcelles, Mathieu; Durette, Chantal; Daouda, Tariq; Laverdure, Jean-Philippe; Vincent, Krystel; Lemieux, Sebastien; Perreault, Claude; Thibault, Pierre

Immune features and neoantigen recognition in mismatch repair-proficient colorectal cancer liver metastases

CANCER RESEARCH

IF16.6

2019-07-01

PREAI

Hebert, Steven; Mathieu, Melissa; Henault, David; Marques, Maud; Audemard, Eric; Courcelles, Mathieu; Brown, Scott D.; Wirapati, Pratyaksha; Tejpar, Sabine; D'Angelica, Michael I.; Holt, Robert A.; Mader, Sylvie; Thibault, Pierre; Batist, Gerald; Kleinman, Claudia; Turcotte, Simon

Noncoding regions are the main source of targetable tumor-specific antigens

SCIENCE TRANSLATIONAL MEDICINE

IF14.6

2018-12-05

357

OAAI

Laumont, Celine M.; Vincent, Krystel; Hesnard, Leslie; Audemard, Eric; Bonneil, Eric; Laverdure, Jean-Philippe; Gendron, Patrick; Courcelles, Mathieu; Hardy, Marie-Pierre; Cote, Caroline; Durette, Chantal; St-Pierre, Charles; Benhammadi, Mohamed; Lanoix, Joel; Vobecky, Suzanne; Haddad, Elie; Lemieux, Sebastien; Thibault, Pierre; Perreault, Claude

Comparison of the MHC I Immunopeptidome Repertoire of B-Cell Lymphoblasts Using Two Isolation Methods

PROTEOMICS

IF3.9

2018-04-24

PREAI

Lanoix, Joel; Durette, Chantal; Courcelles, Mathieu; Cossette, Emilie; Comtois-Marotte, Simon; Hardy, Marie-Pierre; Cote, Caroline; Perreault, Claude; Thibault, Pierre

The SysteMHC Atlas project

NUCLEIC ACIDS RESEARCH

IF13.1

2017-07-29

117

OAAI

Shao, Wenguang; Pedrioli, Patrick G. A.; Wolski, Witold; Scurtescu, Cristian; Schmid, Emanuel; Vizcaino, Juan A.; Courcelles, Mathieu; Schuster, Heiko; Kowalewski, Daniel; Marino, Fabio; Arlehamn, Cecilia S. L.; Vaughan, Kerrie; Peters, Bjoern; Sette, Alessandro; Ottenhoff, Tom H. M.; Meijgaarden, Krista E.; Nieuwenhuizen, Natalie; Kaufmann, Stefan H. E.; Schlapbach, Ralph; Castle, John C.; Nesvizhskii, Alexey I.; Nielsen, Morten; Deutsch, Eric W.; Campbell, David S.; Moritz, Robert L.; Zubarev, Roman A.; Ytterberg, Anders Jimmy; Purcell, Anthony W.; Marcilla, Miguel; Paradela, Alberto; Wang, Qi; Costello, Catherine E.; Ternette, Nicola; van Veelen, Peter A.; van Els, Cecile A. C. M.; Heck, Albert J. R.; de Souza, Gustavo A.; Sollid, Ludvig M.; Admon, Arie; Stevanovic, Stefan; Rammensee, Hans-Georg; Thibault, Pierre; Perreault, Claude; Bassani-Sternberg, Michal; Aebersold, Ruedi; Caron, Etienne

CLMSVault: A Software Suite for Protein Cross-Linking Mass- Spectrometry Data Analysis and Visualization

JOURNAL OF PROTEOME RESEARCH

IF3.6

2017-06-05

OAAI

Courcelles, Mathieu; Coulombe-Huntington, Jasmin; Cossette, Emilie; Gingras, Anne-Claude; Thibault, Pierre; Tyers, Mike

MHC class I-associated peptides derive from selective regions of the human genome

JOURNAL OF CLINICAL INVESTIGATION

IF13.6

2016-11-14

162

OAAI

Pearson, Hillary; Daouda, Tariq; Granados, Diana Paola; Durette, Chantal; Bonneil, Eric; Courcelles, Mathieu; Rodenbrock, Anja; Laverdure, Jean-Philippe; Cote, Caroline; Mader, Sylvie; Lemieux, Sebastien; Thibault, Pierre; Perreault, Claude

Gpr161 anchoring of PKA consolidates GPCR and cAMP signaling

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2016-06-28

OAAI

Bachmann, Verena A.; Mayrhofer, Johanna E.; Ilouz, Ronit; Tschaikner, Philipp; Raffeiner, Philipp; Roeck, Ruth; Courcelles, Mathieu; Apelt, Federico; Lu, Tsan-Wen; Baillie, George S.; Thibault, Pierre; Aanstad, Pia; Stelzl, Ulrich; Taylor, Susan S.; Stefan, Eduard

Phosphoproteome dynamics reveal novel ERK1/2 MAP kinase substrates with broad spectrum of functions

MOLECULAR SYSTEMS BIOLOGY

IF7.7

2013-05-28

OAAI

Courcelles, Mathieu; Fremin, Christophe; Voisin, Laure; Lemieux, Sebastien; Meloche, Sylvain; Thibault, Pierre

研究方向