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Peer-Timo Bremer

Lawrence Livermore National Laboratory
H指数:49
被引数:8,473

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Dynamics and lipid membrane coupling of the RAS-RAF complex revealed via multiscale simulations

RAS-RAF复合物的动力学及与脂质膜的耦合关系通过多尺度模拟揭示

Biophysical Journal
IF3.1
2025-08-220
OAAI
Timothy S. Carpenter; Fikret Aydin; Chris Neale; Que N. Van; Xiaohua Zhang; Harsh Bhatia; Jason W. Sidabras; Peter H. Frank; Konstantia Georgouli; Jeremy O.B. Tempkin; Violeta Burns Casamayor; Gulcin Gulten; Rebika Shrestha; Debanjan Goswami; Francesco Di Natale; Joseph R. Chavez; Adam Moody; Joseph Y. Moon; Tomas Oppelstrup; James N. Glosli; Gautham Dharuman; Sergio Wong; Shusen Liu; Nicolas W. Hengartner; Cesar A. López; Kien Nguyen; Christopher B. Stanley; Liam G. Stanton; Lara Patel; Tyler Reddy; Thomas J. Turbyville; Brian Van Essen; Peer-Timo Bremer; Felice C. Lightstone; Andrew G. Stephen; Sandrasegaram Gnanakaran; Frank McCormick; Dwight V. Nissley; Frederick H. Streitz; Helgi I. Ingólfsson
Enhanced Exploration of Protein Conformational Space through Integration of Ultra-Coarse-Grained Models to Multiscale Workflows

通过将超粗粒度模型集成到多尺度工作流程中增强蛋白质构象空间的探索

JOURNAL OF PHYSICAL CHEMISTRY B
IF2.9
2025-05-080
OA
Aydin, Fikret; Georgouli, Konstantia; Pottier, Loic; Oppelstrup, Tomas; Carpenter, Timothy S.; Tempkin, Jeremy O. B.; Bremer, Peer-Timo; Nissley, Dwight V.; Streitz, Frederick H.; Lightstone, Felice C.; Ingolfsson, Helgi I.
The ECP ALPINE project: In situ and post hoc visualization infrastructure and analysis capabilities for exascale
INTERNATIONAL JOURNAL OF HIGH PERFORMANCE COMPUTING APPLICATIONS
IF2.5
2024-10-060
PRE
Ahrens, James; Arienti, Marco; Ayachit, Utkarsh; Bennett, Janine; Binyahib, Roba; Biswas, Ayan; Bremer, Peer-Timo; Brugger, Eric; Bujack, Roxana; Carr, Hamish; Chen, Jieyang; Childs, Hank; Dutta, Soumya; Essiari, Abdelilah; Geveci, Berk; Harrison, Cyrus; Hazarika, Subhashis; Fulp, Megan Hickman; Hristov, Petar; Huang, Xuan; Insley, Joseph; Kawakami, Yuya; Keilers, Chloe; Kress, James; Larsen, Matthew; Lipsa, Dan; Majumder, Meghanto; Marsaglia, Nicole; Mateevitsi, Victor A.; Pascucci, Valerio; Patchett, John; Patel, Saumil; Petruzza, Steve; Pugmire, David; Rizzi, Silvio; Rogers, David H.; Ruebel, Oliver; Salinas, Jorge; Sane, Sudhanshu; Shudler, Sergei; Stewart, Alexandra; Tsai, Karen; Turton, Terece L.; Usher, Will; Wang, Zhe; Weber, Gunther H.; Wetterer-Nelson, Corey; Woodring, Jonathan; Yenpure, Abhishek
Machine Learning-Driven Multiscale Modeling: Bridging the Scales with a Next-Generation Simulation Infrastructure

机器学习驱动的多尺度建模: 用下一代仿真基础设施桥接尺度

JOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
2023-04-1918
OAAI
Ingolfsson, Helgi I.; Bhatia, Harsh; Aydin, Fikret; Oppelstrup, Tomas; Lopez, Cesar A.; Stanton, Liam G.; Carpenter, Timothy S.; Wong, Sergio; Di Natale, Francesco; Zhang, Xiaohua; Moon, Joseph Y.; Stanley, Christopher B.; Chavez, Joseph R.; Nguyen, Kien; Dharuman, Gautham; Burns, Violetta; Shrestha, Rebika; Goswami, Debanjan; Gulten, Gulcin; Van, Que N.; Ramanathan, Arvind; Van Essen, Brian; Hengartner, Nicolas W.; Stephen, Andrew G.; Turbyville, Thomas; Bremer, Peer-Timo; Gnanakaran, S.; Glosli, James N.; Lightstone, Felice C.; Nissley, Dwight V.; Streitz, Frederick H.
Exploring CRD mobility during RAS/RAF engagement at the membrane

在膜上的RAS/RAF接合期间探索CRD迁移率

BIOPHYSICAL JOURNAL
IF3.1
2022-10-0116
OAAI
Nguyen, Kien; Lopez, Cesar A.; Neale, Chris; Van, Que N.; Carpenter, Timothy S.; Di Natale, Francesco; Travers, Timothy; Tran, Timothy H.; Chan, Albert H.; Bhatia, Harsh; Frank, Peter H.; Tonelli, Marco; Zhang, Xiaohua; Gulten, Gulcin; Reddy, Tyler; Burns, Violetta; Oppelstrup, Tomas; Hengartner, Nick; Simanshu, Dhirendra K.; Bremer, Peer-Timo; Chen, De; Glosli, James N.; Shrestha, Rebika; Turbyville, Thomas; Streitz, Frederick H.; Nissley, Dwight V.; Ingolfsson, Helgi I.; Stephen, Andrew G.; Lightstone, Felice C.; Gnanakaran, Sandrasegaram
Enabling machine learning-ready HPC ensembles with Merlin

使用Merlin实现机器学习就绪型HPC集成

FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE
IF6.1
2022-06-0119
OAAI
Peterson, J. Luc; Bay, Ben; Koning, Joe; Robinson, Peter; Semler, Jessica; White, Jeremy; Anirudh, Rushil; Athey, Kevin; Bremer, Peer-Timo; Di Natale, Francesco; Fox, David; Gaffney, Jim A.; Jacobs, Sam A.; Kailkhura, Bhavya; Kustowski, Bogdan; Langer, Steven; Spears, Brian; Thiagarajan, Jayaraman; Van Essen, Brian; Yeom, Jae-Seung
Machine learning-driven multiscale modeling reveals lipid-dependent dynamics of RAS signaling proteins

机器学习驱动的多尺度建模揭示了RAS信号蛋白的脂质依赖性动力学

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
2022-01-0452
OAAI
Ingolfsson, Helgi I.; Neale, Chris; Carpenter, Timothy S.; Shrestha, Rebika; Lopez, Cesar A.; Tran, Timothy H.; Oppelstrup, Tomas; Bhatia, Harsh; Stanton, Liam G.; Zhang, Xiaohua; Sundram, Shiv; Di Natale, Francesco; Agarwal, Animesh; Dharuman, Gautham; Schumacher, Sara I. L. Kokkila; Turbyville, Thomas; Gulten, Gulcin; Van, Que N.; Goswami, Debanjan; Jean-Francois, Frantz; Agamasu, Constance; Chen, De; Hettige, Jeevapani J.; Travers, Timothy; Sarkar, Sumantra; Surh, Michael P.; Yang, Yue; Moody, Adam; Liu, Shusen; Van Essen, Brian C.; Voter, Arthur F.; Ramanathan, Arvind; Hengartner, Nicolas W.; Simanshu, Dhirendra K.; Stephen, Andrew G.; Bremer, Peer-Timo; Gnanakaran, S.; Glosli, James N.; Lightstone, Felice C.; McCormick, Frank; Nissley, Dwight, V; Streitz, Frederick H.

研究方向

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F
Felice C. Lightstone
H 指数:38论文数:212被引数:5,939
H
Helgi I. Ingólfsson
H 指数:39论文数:156被引数:9,855
H
Harsh Bhatia
H 指数:21论文数:89被引数:1,590
V
Valerio Pascucci
H 指数:55论文数:467被引数:1.1万
T
Timothy S. Carpenter
H 指数:24论文数:95被引数:2,328
J
Jayaraman J. Thiagarajan
H 指数:26论文数:307被引数:3,075
R
Rushil Anirudh
H 指数:17论文数:165被引数:1,226
D
Dwight V. Nissley
H 指数:29论文数:170被引数:5,114
T
Tomas Oppelstrup
H 指数:19论文数:104被引数:2,030
F
Frederick H. Streitz
H 指数:28论文数:110被引数:4,070