Matthew Amodio - Publications, H-index & Citations

Matthew Amodio

MIT and Harvard

10H指数

42论文数

631被引数

收录论文 9

发表时间

Multimodal framework for the joint analysis of single-cell RNA and T cell receptor sequencing data predicts T cell response to cancer immunotherapy 多模态框架用于单细胞RNA和T细胞受体测序数据的联合分析，可预测T细胞对癌症免疫治疗的反应

Nature Communications

IF15.7

2026-03-12

OAAI

Chujun He; Matthew Amodio; Orr Ashenberg; Kai W. Wucherpfennig; Ramnik J. Xavier; Caroline Uhler

Single-cell analysis reveals transcriptional dynamics in healthy primary parathyroid tissue

GENOME RESEARCH

IF5.5

2024-07-08

PREAI

Venkat, Aarthi; Carlino, Maximillian J.; Lawton, Betty R.; Prasad, Manju L.; Amodio, Matthew; Gibson, Courtney E.; Zeiss, Caroline J.; Youlten, Scott E.; Krishnaswamy, Smita; Krause, Diane S.

Single-cell multi-modal GAN reveals spatial patterns in single-cell data from triple-negative breast cancer

PATTERNS

IF7.4

2022-09-01

OAAI

Amodio, Matthew; Youlten, Scott E.; Venkat, Aarthi; San Juan, Beatriz P.; Chaffer, Christine L.; Krishnaswamy, Smita

Generating hard-to-obtain information from easy-to-obtain information: Applications in drug discovery and clinical inference

PATTERNS

IF7.4

2021-07-01

OAAI

Amodio, Matthew; Shung, Dennis; Burkhardt, Daniel B.; Wong, Patrick; Simonov, Michael; Yamamoto, Yu; van Dijk, David; Wilson, Francis Perry; Iwasaki, Akiko; Krishnaswamy, Smita

Single cell immune profiling of dengue virus patients reveals intact immune responses to Zika virus with enrichment of innate immune signatures

PLOS NEGLECTED TROPICAL DISEASES

IF3.4

2020-03-09

OAAI

Zhao, Yujiao; Amodio, Matthew; Vander Wyk, Brent; Gerritsen, Bram; Kumar, Mahesh M.; van Dijk, David; Moon, Kevin; Wang, Xiaomei; Malawista, Anna; Richards, Monique M.; Cahill, Megan E.; Desai, Anita; Sivadasan, Jayasree; Venkataswamy, Manjunatha M.; Ravi, Vasanthapuram; Fikrig, Erol; Kumar, Priti; Kleinstein, Steven H.; Krishnaswamy, Smita; Montgomery, Ruth R.

Exploring single-cell data with deep multitasking neural networks 利用深度多任务神经网络探索单细胞数据

NATURE METHODS

IF32.1

2019-10-07

202

OAAI

Amodio, Matthew; van Dijk, David; Srinivasan, Krishnan; Chen, William S.; Mohsen, Hussein; Moon, Kevin R.; Campbell, Allison; Zhao, Yujiao; Wang, Xiaomei; Venkataswamy, Manjunatha; Desai, Anita; Ravi, V.; Kumar, Priti; Montgomery, Ruth; Wolf, Guy; Krishnaswamy, Smita

Final Results of a Phase II Prospective Trial Evaluating the Combination of Stereotactic Body Radiotherapy (SBRT) with Concurrent Pembrolizumab in Patients with Metastatic Non-Small Cell Lung Cancer (NSCLC)

INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS

IF6.5

2019-09-01

OAAI

Campbell, A. M.; Cai, W. L.; Burkhardt, D.; Gettinger, S. N.; Goldberg, S. B.; Amodio, M.; Kaech, S.; Krishnaswamy, S.; Decker, R. H.

Identification and Analysis of Islet Antigen-Specific CD8+ T Cells with T Cell Libraries

JOURNAL OF IMMUNOLOGY

IF3.4

2018-09-15

OAAI

Ogura, Hideki; Preston-Hurlburt, Paula; Perdigoto, Ana Luisa; Amodio, Matthew; Krishnaswamy, Smita; Clark, Pamela; Yu, Hua; Egli, Dieter; Fouts, Alexandra; Steck, Andrea K.; Herold, Kevan C.

SAUCIE: Sparse autoencoder for unsupervised clustering, imputation, and embedding

CANCER RESEARCH

IF16.6

2018-07-01

PREAI

Amodio, Matthew; Srinivasan, Krishnan; van Dijk, David; Mohsen, Hussein; Yim, Kristina; Muhle, Rebecca; Moon, Kevin; Montgomery, Ruth; Noonan, James; Wolf, Guy; Krishnaswamy, Smita

研究方向