B. Franklin Pugh - Publications, H-index & Citations

B. Franklin Pugh

cornell university

66H指数

160论文数

1.8W被引数

收录论文 62

发表时间

Genome-wide rotational and translational phasing of nucleosomes with human transcription factors 利用人类转录因子对核小体进行全基因组范围的旋转和翻译相位的确定

Molecular Cell

IF16.6

2026-07-02

PREAI

Haining Chen; Jordan E. Krebs; Olivia W. Lang; Jiayi Hu; Devin C. Mellini; Judith Hyle; Chunliang Li; William K.M. Lai; B. Franklin Pugh

GenoPipe: identifying the genotype of origin within (epi)genomic datasets

NUCLEIC ACIDS RESEARCH

IF13.1

2023-11-02

OAAI

Lang, Olivia W.; Srivastava, Divyanshi; Pugh, B. Franklin; Lai, William K. M.

Cloning and biochemical characterization of TAF-172, a human homolog of yeast Mot1

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-28

OAAI

Chicca, JJ; Auble, DT; Pugh, BF

NuA4-directed chromatin transactions throughout the Saccharomyces cerevisiae genome

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-27

OAAI

Durant, Melissa; Pugh, B. Franklin

NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-27

228

OAAI

Lee, Chanhyo; Li, Xiaoyong; Hechmer, Aaron; Eisen, Michael; Biggin, Mark D.; Venters, Bryan J.; Jiang, Cizhong; Li, Jian; Pugh, B. Franklin; Gilmour, David S.

Structural and functional analysis of mutations along the crystallographic dimer interface of the yeast TATA binding protein

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-27

OAAI

Kou, HP; Irvin, JD; Huisinga, KL; Mitra, M; Pugh, BF

Genorne-wide relationships between TAF1 and histone acetyltransferases in Saccharomyces cerevisiae

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-27

OAAI

Durant, M; Pugh, BF

Genome-Wide Transcriptional Dependence on Conserved Regions of Mot1

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-20

OAAI

Venters, Bryan J.; Irvin, Jordan D.; Gramlich, Paul; Pugh, B. Franklin

The Linker Histone Plays a Dual Role during Gametogenesis in Saccharomyces cerevisiae 连接子组蛋白在酿酒酵母的配子发生过程中起双重作用

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-20

OAAI

Bryant, Jessica M.; Govin, Jerome; Zhang, Liye; Donahue, Greg; Pugh, B. Franklin; Berger, Shelley L.

Sequential Recruitment of SAGA and TFIID in a Genomic Response to DNA Damage in Saccharomyces cerevisiae

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-20

OAAI

Ghosh, Sujana; Pugh, B. Franklin

Genome-Wide Organization of GATA1 and TAL1 Determined at High Resolution

MOLECULAR AND CELLULAR BIOLOGY

IF2.7

2023-03-18

OAAI

Han, G. Celine; Vinayachandran, Vinesh; Bataille, Alain R.; Park, Bongsoo; Chan-Salis, Ka Yim; Keller, Cheryl A.; Long, Maria; Mahony, Shaun; Hardison, Ross C.; Pugh, B. Franklin

PEGR: a flexible management platform for reproducible epigenomic and genomic research

GENOME BIOLOGY

IF9.4

2022-04-19

OAAI

Shao, Danying; Kellogg, Gretta D.; Nematbakhsh, Ali; Kuntala, Prashant K.; Mahony, Shaun; Pugh, B. Franklin; Lai, William K. M.

Ssl2/TFIIH function in transcription start site scanning by RNA polymerase II in Saccharomyces cerevisiae 酿酒酵母中RNA聚合酶II在转录起始位点扫描中的Ssl2/TFIIH功能

ELIFE

IF0

2021-10-15

OAAI

Zhao, Tingting; Vvedenskaya, Irina O.; Lai, William K. M.; Basu, Shrabani; Pugh, B. Franklin; Nickels, Bryce E.; Kaplan, Craig D.

A ChIP-exo screen of 887 Protein Capture Reagents Program transcription factor antibodies in human cells

GENOME RESEARCH

IF5.5

2021-08-23

OAAI

Lai, William K. M.; Mariani, Luca; Rothschild, Gerson; Smith, Edwin R.; Venters, Bryan J.; Blanda, Thomas R.; Kuntala, Prashant K.; Bocklund, Kylie; Mairose, Joshua; Dweikat, Sarah N.; Mistretta, Katelyn; Rossi, Matthew J.; James, Daniela; Anderson, James T.; Phanor, Sabrina K.; Zhang, Wanwei; Zhao, Zibo; Shah, Avani P.; Novitzky, Katherine; McAnarney, Eileen; Keogh, Michael-C; Shilatifard, Ali; Basu, Uttiya; Bulyk, Martha L.; Pugh, B. Franklin

Acute stress drives global repression through two independent RNA polymerase II stalling events in Saccharomyces

CELL REPORTS

IF6.9

2021-01-01

OAAI

Badjatia, Nitika; Rossi, Matthew J.; Bataille, Alain R.; Mittal, Chitvan; Lai, William K. M.; Pugh, B. Franklin

Actin R256 Mono-methylation Is a Conserved Post-translational Modification Involved in Transcription

CELL REPORTS

IF6.9

2020-09-01

OAAI

Kumar, Ashok; Zhong, Yuan; Albrecht, Amelie; Sang, Pau Biak; Maples, Adrian; Liu, Zhenan; Vinayachandran, Vinesh; Reja, Rohit; Lee, Chia-Fang; Kumar, Ashutosh; Chen, Jiyuan; Xiao, Jing; Park, Bongsoo; Shen, Jianjun; Liu, Bin; Person, Maria D.; Trybus, Kathleen M.; Zhang, Kam Y. J.; Pugh, B. Franklin; Kamm, Kristine E.; Milewicz, Dianna M.; Shen, Xuetong; Kapoor, Prabodh

Alignment and quantification of ChIP-exo crosslinking patterns reveal the spatial organization of protein-DNA complexes

NUCLEIC ACIDS RESEARCH

IF13.1

2020-08-04

OAAI

Yamada, Naomi; Rossi, Matthew J.; Farrell, Nina; Pugh, B. Franklin; Mahony, Shaun

Universal promoter scanning by Pol II during transcription initiation in Saccharomyces cerevisiae

GENOME BIOLOGY

IF9.4

2020-06-02

OAAI

Qiu, Chenxi; Jin, Huiyan; Vvedenskaya, Irina; Llenas, Jordi Abante; Zhao, Tingting; Malik, Indranil; Visbisky, Alex M.; Schwartz, Scott L.; Cui, Ping; Cabart, Pavel; Han, Kang Hoo; Lai, William K. M.; Metz, Richard P.; Johnson, Charles D.; Sze, Sing-Hoi; Pugh, B. Franklin; Nickels, Bryce E.; Kaplan, Craig D.

In vivo genome-wide binding interactions of mouse and human constitutive androstane receptors reveal novel gene targets

NUCLEIC ACIDS RESEARCH

IF13.1

2018-08-08

OAAI

Niu, Ben; Coslo, Denise M.; Bataille, Alain R.; Albert, Istvan; Pugh, B. Franklin; Omiecinski, Curtis J.

Simplified ChIP-exo assays

NATURE COMMUNICATIONS

IF15.7

2018-07-20

OAAI

Rossi, Matthew J.; Lai, William K. M.; Pugh, B. Franklin

研究方向