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J

Jiřı́ Vondrášek

Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences

37H指数
192论文数
5.7K被引数
收录论文 72
发表时间
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Nonconsensus flanking sequence of hundreds of base pairs around in vivo binding sites: statistical beacons for transcription factor scanning体内外结合位点周围数百个碱基对的非共识侧翼序列：转录因子扫描的统计信标
errNucleic Acids Research
IF13.1
err2026-07-21
err0
errOAAI
errKateřina Faltejsková; Josef Šulc; Jiří Vondrášek
err分享
err收藏
Toward a unified framework for determining conformational ensembles of disordered proteins走向确定无序蛋白质构象集合的统一框架
errNature Methods
IF32.1
err2026-03-09
err0
PREAI
errHamidreza Ghafouri; Pavel Kadeřávek; Ana M. Melo; Maria Cristina Aspromonte; Pau Bernadó; Juan Cortés; Zsuzsanna Dosztányi; Gábor Erdős; Michael Feig; Giacomo Janson; Kresten Lindorff-Larsen; Frans A. A. Mulder; Peter Nagy; Richard Pestell; Damiano Piovesan; Marco Schiavina; Benjamin Schuler; Nathalie Sibille; Giulio Tesei; Peter Tompa; Michele Vendruscolo; Jiri Vondrasek; Wim Vranken; Lukas Zidek; Silvio C. E. Tosatto; Alexander Miguel Monzon
err分享
err收藏
Antimicrobial peptides derived from human ameloblastin targeting biofilms源自人牙釉蛋白的抗菌肽靶向生物膜
errBMC Oral Health
IF3.1
err2025-12-02
err0
errOAAI
errVeronika Vetyskova; Petra Kasparova; Lucie Bednarova; Miroslav Hajek; Jan Luxa; Alejandro Barrantes Bautista; Jane Elin Reseland; Olga Matatkova; Jan Masak; Jiri Vondrasek; Kristyna Vydra Bousova
err分享
err收藏
Swapped domain orders in ZO-1 PDZ3 fusion proteins – implications for binding of established and novel targetsZO-1 PDZ3融合蛋白中的交换域序——对已知和新型靶点结合的影响
errArchives of Biochemistry and Biophysics
IF3
err2025-10-03
err0
PREAI
errMarie Hamsikova; Jan Hurdalek; Leandro Simonetti; Jakub Ptacek; Kristyna Vydra Bousova; Jiri Vondrasek; Ylva Ivarsson; Lucie Zemanova
err分享
err收藏
Unraveling the Tether: Exploring Representative Protein Linkers and Their Structural and Thermodynamical Properties解开束缚：探索代表性蛋白质连接肽及其结构和热力学性质
errJOURNAL OF PHYSICAL CHEMISTRY B
IF2.9
err2025-04-06
err0
errOAAI
errSulc, Josef; Vondrasek, Jiri
err分享
err收藏
Oligomerization Function of the Native Exon 5 Sequence of Ameloblastin Fused with Calmodulin
errACS OMEGA
IF4.3
err2025-02-19
err0
errOAAI
errZouharova, Monika; Herman, Petr; Bednarova, Lucie; Vetyskova, Veronika; Hadravova, Romana; Postulkova, Klara; Zemanova, Lucie; Vondrasek, Jiri; Bousova, Kristyna Vydra
err分享
err收藏
Proteolytic profiles of two isoforms of human AMBN expressed in E. coli by MMP-20 and KLK-4 proteases
errHELIYON
IF3.6
err2024-01-01
err1
errOAAI
errVetyskova, Veronika; Hubalek, Martin; Sulc, Josef; Prochazka, Jan; Vondrasek, Jiri; Bousova, Kristyna Vydra
err分享
err收藏
What are the minimal folding seeds in proteins? Experimental and theoretical assessment of secondary structure propensities of small peptide fragments
errCHEMICAL SCIENCE
IF7.4
err2024-01-01
err1
errOAAI
errOsifova, Zuzana; Kalvoda, Tadeas; Galgonek, Jakub; Culka, Martin; Vondrasek, Jiri; Bour, Petr; Bednarova, Lucie; Andrushchenko, Valery; Dracinsky, Martin; Rulisek, Lubomir
err分享
err收藏
A comparison of approaches to accessing existing biological and chemical relational databases via SPARQL
errJOURNAL OF CHEMINFORMATICS
IF5.7
err2023-06-20
err3
errOAAI
errGalgonek, Jakub; Vondrasek, Jiri
err分享
err收藏
Early evolution of enamel matrix proteins is reflected by pleiotropy of physiological functions釉基质蛋白的早期进化反映了生理功能的多效性
errSCIENTIFIC REPORTS
IF3.9
err2023-01-26
err7
errOAAI
errSpoutil, Frantisek; Aranaz-Novaliches, Goretti; Prochazkova, Michaela; Wald, Tomas; Novosadova, Vendula; Kasparek, Petr; Osicka, Radim; Reseland, Janne E.; Lyngstadaas, Staale P.; Tiainen, Hanna; Bousova, Kristyna; Vondrasek, Jiri; Sedlacek, Radislav; Prochazka, Jan
err分享
err收藏
Iterative Landmark-Based Umbrella Sampling (ILBUS) Protocol for Sampling of Conformational Space of Biomolecules
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2022-09-19
err1
PREAI
errVymetal, Jiri; Vondrasek, Jiri
err分享
err收藏
Fusion of two unrelated protein domains in a chimera protein and its 3D prediction: Justification of the x-ray reference structures as a prediction benchmark嵌合蛋白中两个不相关的蛋白质结构域的融合及其3D预测: x射线参考结构作为预测基准的合理性
errPROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
IF2.8
err2022-07-27
err2
errOAAI
errVymetal, Jiri; Mertova, Katerina; Bousova, Kristyna; Sulc, Josef; Tripsianes, Konstantinos; Vondrasek, Jiri
err分享
err收藏
The LOTUS initiative for open knowledge management in natural products researchLOTUS在天然产品研究中进行开放知识管理的倡议
errELIFE
IF0
err2022-05-26
err130
errOAAI
errRutz, Adriano; Sorokina, Maria; Galgonek, Jakub; Mietchen, Daniel; Willighagen, Egon; Gaudry, Arnaud; Graham, James G.; Stephan, Ralf; Page, Roderic; Vondrasek, Jiri; Steinbeck, Christoph; Pauli, Guido F.; Wolfender, Jean-Luc; Bisson, Jonathan; Allard, Pierre-Marie
err分享
err收藏
TRPM7 N-terminal region forms complexes with calcium binding proteins CaM and S100A1
errHELIYON
IF3.6
err2021-12-01
err3
errOAAI
errBousova, Kristyna; Zouharova, Monika; Herman, Petr; Vetyskova, Veronika; Jiraskova, Katerina; Vondrasek, Jiri
err分享
err收藏
Amino Acid Interactions (INTAA) web server v2.0: a single service for computation of energetics and conservation in biomolecular 3D structures
errNUCLEIC ACIDS RESEARCH
IF13.1
err2021-05-21
err7
errOAAI
errVymetal, Jiri; Jakubec, David; Galgonek, Jakub; Vondrasek, Jiri
err分享
err收藏
IDSM ChemWebRDF: SPARQLing small-molecule datasets
errJOURNAL OF CHEMINFORMATICS
IF5.7
err2021-05-12
err10
errOAAI
errGalgonek, Jakub; Vondrasek, Jiri
err分享
err收藏
Intrinsically disordered protein domain of human ameloblastin in synthetic fusion with calmodulin increases calmodulin stability and modulates its function
errINTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
IF8.5
err2021-01-01
err3
PREAI
errZouharova, Monika; Vymetal, Jiri; Bednarova, Lucie; Vanek, Ondrej; Herman, Petr; Vetyskova, Veronika; Postulkova, Klara; Lingstaadas, Petter S.; Vondrasek, Jiri; Bousova, Kristyna
err分享
err收藏
GigaSOM.jl: High-performance clustering and visualization of huge cytometry datasets
errGIGASCIENCE
IF3.9
err2020-11-18
err9
errOAAI
errKratochvil, Miroslav; Hunewald, Oliver; Heirendt, Laurent; Verissimo, Vasco; Vondrasek, Jiri; Satagopam, Venkata P.; Schneider, Reinhard; Trefois, Christophe; Ollert, Markus
err分享
err收藏
Efficient Estimation of Absolute Binding Free Energy for a Homeodomain-DNA Complex from Nonequilibrium Pulling Simulations
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2020-03-25
err7
PREAI
errJakubec, David; Vondrasek, Jiri
err分享
err收藏
Interoperable chemical structure search service (vol 11, 45, 2019)
errJOURNAL OF CHEMINFORMATICS
IF5.7
err2020-02-13
err0
errOAAI
errKratochvil, Miroslav; Vondrasek, Jiri; Galgonek, Jakub
err分享
err收藏

研究方向

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