未登录 de novo variant calling identifies cancer mutation signatures in the 1000 Genomes Project de novo变体调用在1000基因组项目中识别癌症突变特征 Ng, Jeffrey K.; Vats, Pankaj; Fritz-Waters, Elyn; Sarkar, Stephanie; Sams, Eleanor I.; Padhi, Evin M.; Payne, Zachary L.; Leonard, Shawn; West, Marc A.; Prince, Chandler; Trani, Lee; Jansen, Marshall; Vacek, George; Samadi, Mehrzad; Harkins, Timothy T.; Pohl, Craig; Turner, Tychele N. 分享 收藏
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Mitochondrial genomics reveals the evolutionary history of the porpoises (Phocoenidae) across the speciation continuum Ben Chehida, Yacine; Thumloup, Julie; Schumacher, Cassie; Harkins, Timothy; Aguilar, Alex; Borrell, Asuncion; Ferreira, Marisa; Rojas-Bracho, Lorenzo; Robertson, Kelly M.; Taylor, Barbara L.; Vikingsson, Gisli A.; Weyna, Arthur; Romiguier, Jonathan; Morin, Phillip A.; Fontaine, Michael C. 分享 收藏
Targeted next-generation sequencing of cell-free tumor DNA to longitudinally monitor cancer burden and progression Irish, Jonathan C.; Schumacher, Cassie A.; Nair, Navya; Camacho-Vanegas, Olga; Rose-Figura, Jordan; Wood, Ashley; Sandhu, Sukhinder; Chaluvadi, Sushma; Chupreta, Sergey; Kurihara, Laurie; Harkins, Timothy; Martignetti, John A.; Makarov, Vladimir 分享 收藏
Complementary NGS approaches on digitally sorted pure tumor cells reveal hidden molecular characteristics in low tumor content FFPE specimens Forcato, Claudio; Ferrarini, Alberto; Buson, Genny; Schumacher, Cassie; Bolognesi, Chiara; Tononi, Paola; del Monaco, Valentina; Mangano, Chiara; Fontana, Francesca; Medoro, Gianni; Harkins, Timothy; Manaresi, Nicolo 分享 收藏
Characterizing tumorigenesis of ovarian cancer across metastatic tumors and circulating, cell-free DNA Wood, Ashley; Sandhu, Sukhinder; Dashkoff, Matthew; Camacho-Vanegas, Olga; Kurihara, Laurie; Harkins, Timothy; Martignetti, John; Makarov, Vladimir; Dottino, Peter 分享 收藏
Performance Comparison of Illumina and Ion Torrent Next-Generation Sequencing Platforms for 16S rRNA-Based Bacterial Community Profiling (vol 80, pg 7583, 2014) Salipante, Stephen J.; Kawashima, Toana; Rosenthal, Christopher; Hoogestraat, Daniel R.; Cummings, Lisa A.; Sengupta, Dhruba J.; Harkins, Timothy T.; Cookson, Brad T.; Hoffman, Noah G. 分享 收藏
Digital sorting enables whole-exome and low-pass whole-genome sequencing from low tumor-content formalin-fixed paraffin embedded (FFPE) biopsies Forcato, C.; Laliberte, J.; Bolognesi, C.; Schumacher, C.; Buson, G.; Mangano, C.; Tononi, P.; Medoro, G.; Harkins, T.; Manaresi, N. 分享 收藏
The Genome of the Self-Fertilizing Mangrove Rivulus Fish, Kryptolebias marmoratus: A Model for Studying Phenotypic Plasticity and Adaptations to Extreme Environments Kelley, Joanna L.; Yee, Muh-Ching; Brown, Anthony P.; Richardson, Rhea R.; Tatarenkov, Andrey; Lee, Clarence C.; Harkins, Timothy T.; Bustamante, Carlos D.; Earley, Ryan L. 分享 收藏
Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs 基于人口统计学的家犬基因组区域选择评估 Freedman, Adam H.; Schweizer, Rena M.; Ortega-Del Vecchyo, Diego; Han, Eunjung; Davis, Brian W.; Gronau, Ilan; Silva, Pedro M.; Galaverni, Marco; Fan, Zhenxin; Marx, Peter; Lorente-Galdos, Belen; Ramirez, Oscar; Hormozdiari, Farhad; Alkan, Can; Vila, Carles; Squire, Kevin; Geffen, Eli; Kusak, Josip; Boyko, Adam R.; Parker, Heidi G.; Lee, Clarence; Tadigotla, Vasisht; Siepel, Adam; Bustamante, Carlos D.; Harkins, Timothy T.; Nelson, Stanley F.; Marques-Bonet, Tomas; Ostrander, Elaine A.; Wayne, Robert K.; Novembre, John 分享 收藏
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Intratumor heterogeneity in non-small cell lung cancer inferred by multi-region exome sequencing Bruin, Elza D.; McGranahan, Nicholas; Yates, Lucy; Jamal-Hanjani, Mariam; Salm, Max; Mitter, Richard; Shafi, Seema; Murugaesu, Nirupa; Rowan, Andrew; Gerlinger, Marco; Wedge, David; Horswell, Stuart; Varela, Ignacio; Tom, Warren; Parikh, Chaitali; Harkins, Timothy; Lee, Clarence; Matthews, Nik; Stewart, Aengus; Campbell, Peter; Swanton, Charles 分享 收藏
Comparative genomics of 274 Vibrio cholerae genomes reveals mobile functions structuring three niche dimensions Dutilh, Bas E.; Thompson, Cristiane C.; Vicente, Ana C. P.; Marin, Michel A.; Lee, Clarence; Silva, Genivaldo G. Z.; Schmieder, Robert; Andrade, Bruno G. N.; Chimetto, Luciane; Cuevas, Daniel; Garza, Daniel R.; Okeke, Iruka N.; Aboderin, Aaron Oladipo; Spangler, Jessica; Ross, Tristen; Dinsdale, Elizabeth A.; Thompson, Fabiano L.; Harkins, Timothy T.; Edwards, Robert A. 分享 收藏
Population Genomic Analysis of Ancient and Modern Genomes Yields New Insights into the Genetic Ancestry of the Tyrolean Iceman and the Genetic Structure of Europe Sikora, Martin; Carpenter, Meredith L.; Moreno-Estrada, Andres; Henn, Brenna M.; Underhill, Peter A.; Sanchez-Quinto, Federico; Zara, Ilenia; Pitzalis, Maristella; Sidore, Carlo; Busonero, Fabio; Maschio, Andrea; Angius, Andrea; Jones, Chris; Mendoza-Revilla, Javier; Nekhrizov, Georgi; Dimitrova, Diana; Theodossiev, Nikola; Harkins, Timothy T.; Keller, Andreas; Maixner, Frank; Zink, Albert; Abecasis, Goncalo; Sanna, Serena; Cucca, Francesco; Bustamante, Carlos D. 分享 收藏
Somatic mutations found in the healthy blood compartment of a 115-yr-old woman demonstrate oligoclonal hematopoiesis Holstege, Henne; Pfeiffer, Wayne; Sie, Daoud; Hulsman, Marc; Nicholas, Thomas J.; Lee, Clarence C.; Ross, Tristen; Lin, Jue; Miller, Mark A.; Ylstra, Bauke; Meijers-Heijboer, Hanne; Brugman, Martijn H.; Staal, Frank J. T.; Holstege, Gert; Reinders, Marcel J. T.; Harkins, Timothy T.; Levy, Samuel; Sistermansl, Erik A. 分享 收藏
Detection of Circulating Tumor DNA in Early- and Late-Stage Human Malignancies 早期和晚期人类恶性肿瘤中循环肿瘤DNA的检测 Bettegowda, Chetan; Sausen, Mark; Leary, Rebecca J.; Kinde, Isaac; Wang, Yuxuan; Agrawal, Nishant; Bartlett, Bjarne R.; Wang, Hao; Luber, Brandon; Alani, Rhoda M.; Antonarakis, Emmanuel S.; Azad, Nilofer S.; Bardelli, Alberto; Brem, Henry; Cameron, John L.; Lee, Clarence C.; Fecher, Leslie A.; Gallia, Gary L.; Gibbs, Peter; Le, Dung; Giuntoli, Robert L.; Goggins, Michael; Hogarty, Michael D.; Holdhoff, Matthias; Hong, Seung-Mo; Jiao, Yuchen; Juhl, Hartmut H.; Kim, Jenny J.; Siravegna, Giulia; Laheru, Daniel A.; Lauricella, Calogero; Lim, Michael; Lipson, Evan J.; Marie, Suely Kazue Nagahashi; Netto, George J.; Oliner, Kelly S.; Olivi, Alessandro; Olsson, Louise; Riggins, Gregory J.; Sartore-Bianchi, Andrea; Schmidt, Kerstin; Shih, Ie-Ming; Oba-Shinjo, Sueli Mieko; Siena, Salvatore; Theodorescu, Dan; Tie, Jeanne; Harkins, Timothy T.; Veronese, Silvio; Wang, Tian-Li; Weingart, Jon D.; Wolfgang, Christopher L.; Wood, Laura D.; Xing, Dongmei; Hruban, Ralph H.; Wu, Jian; Allen, Peter J.; Schmidt, C. Max; Choti, Michael A.; Velculescu, Victor E.; Kinzler, Kenneth W.; Vogelstein, Bert; Papadopoulos, Nickolas; Diaz, Luis A., Jr. 分享 收藏
Genome Sequencing Highlights the Dynamic Early History of Dogs Freedman, Adam H.; Gronau, Ilan; Schweizer, Rena M.; Ortega-Del Vecchyo, Diego; Han, Eunjung; Silva, Pedro M.; Galaverni, Marco; Fan, Zhenxin; Marx, Peter; Lorente-Galdos, Belen; Beale, Holly; Ramirez, Oscar; Hormozdiari, Farhad; Alkan, Can; Vila, Carles; Squire, Kevin; Geffen, Eli; Kusak, Josip; Boyko, Adam R.; Parker, Heidi G.; Lee, Clarence; Tadigotla, Vasisht; Siepel, Adam; Bustamante, Carlos D.; Harkins, Timothy T.; Nelson, Stanley F.; Ostrander, Elaine A.; Marques-Bonet, Tomas; Wayne, Robert K.; Novembre, John 分享 收藏
Genomic and transcriptomic plasticity in treatment-naive ovarian cancer Hoogstraat, Marlous; de Pagter, Mirjam S.; Cirkel, Geert A.; van Roosmalen, Markus J.; Harkins, Timothy T.; Duran, Karen; Kreeftmeijer, Jennifer; Renkens, Ivo; Witteveen, Petronella O.; Lee, Clarence C.; Nijman, Isaac J.; Guy, Tanisha; van 't Slot, Ruben; Jonges, Trudy N.; Lolkema, Martijn P.; Koudijs, Marco J.; Zweemer, Ronald P.; Voest, Emile E.; Cuppen, Edwin; Kloosterman, Wigard P. 分享 收藏
A Comprehensive Assay for CFTR Mutational Analysis Using Next-Generation Sequencing Abou Tayoun, Ahmad N.; Tunkey, Christopher D.; Pugh, Trevor J.; Ross, Tristen; Shah, Minita; Lee, Clarence C.; Harkins, Timothy T.; Wells, Wendy A.; Tafe, Laura J.; Amos, Christopher I.; Tsongalis, Gregory J. 分享 收藏
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