K. Anton Feenstra - Publications, H-index & Citations

K. Anton Feenstra

Vrije Universiteit Amsterdam

26H指数

114论文数

3.1K被引数

收录论文 20

发表时间

PIPENN-EMB ensemble net and protein embeddings generalise protein interface prediction beyond homology

SCIENTIFIC REPORTS

IF3.9

2025-02-05

OAAI

Thomas, David P. G.; Fernandez, Carlos M. Garcia; Haydarlou, Reza; Feenstra, K. Anton

Towards a knowledge graph for pre-/probiotics and microbiota-gut-brain axis diseases 迈向益生菌/益生菌和微生物群-肠-脑轴疾病的知识图谱

SCIENTIFIC REPORTS

IF3.9

2022-11-08

OAAI

Liu, Ting; Lan, Gongjin; Feenstra, K. Anton; Huang, Zhisheng; Heringa, Jaap

ProteinGLUE multi-task benchmark suite for self-supervised protein modeling

SCIENTIFIC REPORTS

IF3.9

2022-09-26

OAAI

Capel, Henriette; Weiler, Robin; Dijkstra, Maurits; Vleugels, Reinier; Bloem, Peter; Feenstra, K. Anton

Multi-task learning to leverage partially annotated data for PPI interface prediction

SCIENTIFIC REPORTS

IF3.9

2022-06-21

OAAI

Capel, Henriette; Feenstra, K. Anton; Abeln, Sanne

The potential use of big data in oncology 大数据在肿瘤学中的潜在应用

ORAL ONCOLOGY

IF3.9

2019-11-01

OAAI

Willems, Stefan M.; Abeln, Sanne; Feenstra, K. Anton; de Bree, Remco; van der Poel, Egge F.; de Jong, Robert J. Baatenburg; Heringa, Jaap; van den Brekel, Michiel W. M.

Motif-Aware PRALINE: Improving the alignment of motif regions

plos biology

IF3.6

2018-11-01

OAAI

Dijkstra, Maurits; Bawono, Punto; Abeln, Sanne; Feenstra, K. Anton; Fokkink, Wan; Heringa, Jaap

Aurora kinase A (AURKA) interaction with Wnt and Ras-MAPK signalling pathways in colorectal cancer

SCIENTIFIC REPORTS

IF3.9

2018-05-14

OAAI

Jacobsen, Annika; Bosch, Linda J. W.; Martens-de Kemp, Sanne R.; Carvalho, Beatriz; Sillars-Hardebol, Anke H.; Dobson, Richard J.; de Rinaldis, Emanuele; Meijer, Gerrit A.; Abeln, Sanne; Heringa, Jaap; Fijneman, Remond J. A.; Feenstra, K. Anton

Interaction of 14-3-3 proteins with the Estrogen Receptor Alpha F domain provides a drug target interface

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2013-05-15

113

OAAI

Leeuwen, Ingrid J. De Vries-van; Pereira, Daniel da Costa; Flach, Koen D.; Piersma, Sander R.; Haase, Christian; Bier, David; Yalcin, Zeliha; Michalides, Rob; Feenstra, K. Anton; Jimenez, Connie R.; de Greef, Tom F. A.; Brunsveld, Luc; Ottmann, Christian; Zwart, Wilbert; de Boer, Albertus H.

Bioinformatics and Systems Biology: bridging the gap between heterogeneous student backgrounds

BRIEFINGS IN BIOINFORMATICS

IF7.7

2013-04-19

OAAI

Abeln, Sanne; Molenaar, Douwe; Feenstra, K. Anton; Hoefsloot, Huub C. J.; Teusink, Bas; Heringa, Jaap

Enabling Grand-Canonical Monte Carlo: Extending the Flexibility of GROMACS Through the GromPy Python Interface Module

JOURNAL OF COMPUTATIONAL CHEMISTRY

IF4.8

2012-02-28

OAAI

Pool, Rene; Heringa, Jaap; Hoefling, Martin; Schulz, Roland; Smith, Jeremy C.; Feenstra, K. Anton

Multi-Harmony: detecting functional specificity from sequence alignment

NUCLEIC ACIDS RESEARCH

IF13.1

2010-06-04

OAAI

Brandt, Bernd W.; Feenstra, K. Anton; Heringa, Jaap

In vitro evolution of styrene monooxygenase from Pseudomonas putida CA-3 for improved epoxide synthesis

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

IF4.3

2009-07-01

PREAI

Gursky, Lucas J.; Nikodinovic-Runic, Jasmina; Feenstra, K. Anton; O'Connor, Kevin E.

On defining the dynamics of hydrophobic patches on protein surfaces

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

IF2.8

2008-01-10

PREAI

Lijnzaad, Philip; Feenstra, K. Anton; Heringa, Jaap; Holstege, Frank C. P.

Sequence harmony: detecting functional specificity from alignments

NUCLEIC ACIDS RESEARCH

IF13.1

2007-07-01

OAAI

Feenstra, K. Anton; Pirovano, Walter; Krab, Klaas; Heringa, Jaap

Sequence comparison by sequence harmony identifies subtype-specific functional sites

NUCLEIC ACIDS RESEARCH

IF13.1

2006-11-27

OAAI

Pirovano, Walter; Feenstra, K. Anton; Heringa, Jaap

Enantioselective substrate binding in a monooxygenase protein model by molecular dynamics and docking

BIOPHYSICAL JOURNAL

IF3.1

2006-11-01

OAAI

Feenstra, K. Anton; Hofstetter, Karin; Bosch, Rolien; Schmid, Andreas; Commandeur, Jan N. M.; Vermeulen, Nico P. E.

Metabolic regio- and stereoselectivity of cytochrome P450 2D6 towards 3,4-methylenedioxy-N-alkylamphetamines:: in silico predictions and experimental validation

JOURNAL OF MEDICINAL CHEMISTRY

IF6.8

2005-08-19

PREAI

Keizers, PHJ; de Graaf, C; de Kanter, FJJ; Oostenbrink, C; Feenstra, KA; Commandeur, JNM; Vermeulen, NPE

Cytochrome P450 in silico: An integrative modeling approach

JOURNAL OF MEDICINAL CHEMISTRY

IF6.8

2005-04-14

195

PREAI

de Graaf, C; Vermeulen, NPE; Feenstra, KA

Molecular modeling of the RNA binding N-terminal part of cowpea chlorotic mottle virus coat protein in solution with phosphate ions

BIOPHYSICAL JOURNAL

IF3.1

1996-12-01

OAAI

vanderSpoel, D; Feenstra, KA; Hemminga, MA; Berendsen, HJC

The PTPN1/N2 Peptide Inhibitor Achieves Potent, Long-Acting Glycemic Control and Weight-Loss Dual Efficacy in Mice PTPN1/N2肽抑制剂在 mice 中实现强效、长效血糖控制和减肥双重疗效

ACS Omega

IF4.3

PREAI

Yiying Shi; Xianmin Yang; Fanxu Meng; Anton Feenstra; Jin Chen; Zongwen Gu; Xiang Gao; Wenqing Yao; Guozhen Dong; Liyan Gong; Han Wu; Chuanliang Zhang; Yuchao Gu

研究方向