未登录 BV-BRC: a unified bacterial and viral bioinformatics resource with expanded functionality and AI integration BV-BRC：一个整合了细菌和病毒生物信息学资源的统一平台，具有扩展功能与人工智能集成 Shukla, Maulik; Wattam, Alice R.; Aleman, Antonio; Bhattacharya, Roshni; Bowers, Nicole; Brettin, Thomas; Capria, Anna; Chia, Nicholas; Cucinell, Clark; Davis, James j; Dempsey, Donald M.; Dickerman, Allan; Dietrich, Emily M.; Gokdemir, Ozan; Hendrickson, R. curtis; Kenyon, Ronald W.; Klahn, Brian; Kuscuoglu, Mehmet; Lefkowitz, Elliot J.; Ma, Heng; Machi, Dustin; Macken, Catherine; Mann, Carla m; Mao, Chunhong; Nguyen, Marcus; Olsen, Gary J.; Olson, Robert D.; Overbeek, Ross; Owens, Sarah M.; Parrello, Bruce; Poretsky, Rachel; Pusch, Gordon D.; Ramanathan, Arvind; Sheriff, Jamal tyrone; Singh, Indresh; Stewart, Lucy; Vanoeffelen, Margo; Vonstein, Veronika; Warren, Andrew S.; Wilke, Andreas; Zmasek, Christian m; Zuniga, Abril; Stevens, Rick L. 分享 收藏
Data imbalance in drug response prediction: multi-objective optimization approach in deep learning setting 药物反应预测中的数据不平衡：深度学习设置中的多目标优化方法 Narykov, Oleksandr; Zhu, Yitan; Brettin, Thomas; Evrard, Yvonne A.; Partin, Alexander; Xia, Fangfang; Shukla, Maulik; Vasanthakumari, Priyanka; Doroshow, James H.; Stevens, Rick L. 分享 收藏
分享 收藏
分享 收藏
Engineering of increased L-Threonine production in bacteria by combinatorial cloning and machine learning 通过组合克隆和机器学习在细菌中增加L-苏氨酸生产的工程 Hanke, Paul; Parrello, Bruce; Vasieva, Olga; Akins, Chase; Chlenski, Philippe; Babnigg, Gyorgy; Henry, Chris; Foflonker, Fatima; Brettin, Thomas; Antonopoulos, Dionysios; Stevens, Rick; Fonstein, Michael 分享 收藏
GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics Zvyagin, Maxim; Brace, Alexander; Hippe, Kyle; Deng, Yuntian; Zhang, Bin; Bohorquez, Cindy Orozco; Clyde, Austin; Kale, Bharat; Perez-Rivera, Danilo; Ma, Heng; Mann, Carla M.; Irvin, Michael; Ozgulbas, Defne G.; Vassilieva, Natalia; Pauloski, James Gregory; Ward, Logan; Hayot-Sasson, Valerie; Emani, Murali; Foreman, Sam; Xie, Zhen; Lin, Diangen; Shukla, Maulik; Nie, Weili; Romero, Josh; Dallago, Christian; Vahdat, Arash; Xiao, Chaowei; Gibbs, Thomas; Foster, Ian; Davis, James J.; Papka, Michael E.; Brettin, Thomas; Stevens, Rick; Anandkumar, Anima; Vishwanath, Venkatram; Ramanathan, Arvind 分享 收藏
Systematic evaluation and comparison of drug response prediction models: a case study of prediction generalization across cell lines datasets Partin, Alexander; Brettin, Thomas S.; Zhu, Yitan; Overbeek, Jamie; Narykov, Oleksandr; Vasanthakumari, Priyanka; Clyde, Austin; Jones, Sara E.; Ganakammal, Satishkumar Ranganathan; Wozniak, Justin M.; Wilke, Andreas; Mohd-Yusof, Jamaludin; Weil, Michael R.; Pearson, Alexander T. 分享 收藏
Data augmentation and multimodal learning for predicting drug response in patient-derived xenografts from gene expressions and histology images Partin, Alexander; Brettin, Thomas; Zhu, Yitan; Dolezal, James M. M.; Kochanny, Sara; Pearson, Alexander T. T.; Shukla, Maulik; Evrard, Yvonne A. A.; Doroshow, James H. H.; Stevens, Rick L. L. 分享 收藏
分享 收藏
AI-accelerated protein-ligand docking for SARS-CoV-2 is 100-fold faster with no significant change in detection Clyde, Austin; Liu, Xuefeng; Brettin, Thomas; Yoo, Hyunseung; Partin, Alexander; Babuji, Yadu; Blaiszik, Ben; Mohd-Yusof, Jamaludin; Merzky, Andre; Turilli, Matteo; Jha, Shantenu; Ramanathan, Arvind; Stevens, Rick 分享 收藏
Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR 介绍细菌和病毒生物信息学资源中心 (bv-brc): 结合PATRIC，IRD和ViPR的资源 Olson, Robert D.; Assaf, Rida; Brettin, Thomas; Conrad, Neal; Cucinell, Clark; Davis, James J.; Dempsey, Donald M.; Dickerman, Allan; Dietrich, Emily M.; Kenyon, Ronald W.; Kuscuoglu, Mehmet; Lefkowitz, Elliot J.; Lu, Jian; Machi, Dustin; Macken, Catherine; Mao, Chunhong; Niewiadomska, Anna; Nguyen, Marcus; Olsen, Gary J.; Overbeek, Jamie C.; Parrello, Bruce; Parrello, Victoria; Porter, Jacob S.; Pusch, Gordon D.; Shukla, Maulik; Singh, Indresh; Stewart, Lucy; Tan, Gene; Thomas, Chris; VanOeffelen, Margo; Vonstein, Veronika; Wallace, Zachary S.; Warren, Andrew S.; Wattam, Alice R.; Xia, Fangfang; Yoo, Hyunseung; Zhang, Yun; Zmasek, Christian M.; Scheuermann, Richard H.; Stevens, Rick L. 分享 收藏
High-Throughput Virtual Screening and Validation of a SARS-CoV-2 Main Protease Noncovalent Inhibitor 一种SARS-CoV-2主要蛋白酶非共价抑制剂的高通量虚拟筛选与验证 Clyde, Austin; Galanie, Stephanie; Kneller, Daniel W.; Ma, Heng; Babuji, Yadu; Blaiszik, Ben; Brace, Alexander; Brettin, Thomas; Chard, Kyle; Chard, Ryan; Coates, Leighton; Foster, Ian; Hauner, Darin; Kertesz, Vilmos; Kumar, Neeraj; Lee, Hyungro; Li, Zhuozhao; Merzky, Andre; Schmidt, Jurgen G.; Tan, Li; Titov, Mikhail; Trifan, Anda; Turilli, Matteo; Van Dam, Hubertus; Chennubhotla, Srinivas C.; Jha, Shantenu; Kovalevsky, Andrey; Ramanathan, Arvind; Head, Martha S.; Stevens, Rick 分享 收藏
分享 收藏
A cross-study analysis of drug response prediction in cancer cell lines 癌细胞系药物反应预测的交叉研究分析 Xia, Fangfang; Allen, Jonathan; Balaprakash, Prasanna; Brettin, Thomas; Garcia-Cardona, Cristina; Clyde, Austin; Cohn, Judith; Doroshow, James; Duan, Xiaotian; Dubinkina, Veronika; Evrard, Yvonne; Fan, Ya Ju; Gans, Jason; He, Stewart; Lu, Pinyi; Maslov, Sergei; Partin, Alexander; Shukla, Maulik; Stahlberg, Eric; Wozniak, Justin M.; Yoo, Hyunseung; Zaki, George; Zhu, Yitan; Stevens, Rick 分享 收藏
A genomic data resource for predicting antimicrobial resistance from laboratory-derived antimicrobial susceptibility phenotypes 从实验室衍生的抗菌药敏表型预测抗菌药耐药性的基因组数据资源 VanOeffelen, Margo; Nguyen, Marcus; Aytan-Aktug, Derya; Brettin, Thomas; Dietrich, Emily M.; Kenyon, Ronald W.; Machi, Dustin; Mao, Chunhong; Olson, Robert; Pusch, Gordon D.; Shukla, Maulik; Stevens, Rick; Vonstein, Veronika; Warren, Andrew S.; Wattam, Alice R.; Yoo, Hyunseung; Davis, James J. 分享 收藏
Converting tabular data into images for deep learning with convolutional neural networks (vol 11, 11325, 2021) 使用卷积神经网络将表格数据转换为图像以进行深度学习 (第11卷，11325，2021) Zhu, Yitan; Brettin, Thomas; Xia, Fangfang; Partin, Alexander; Shukla, Maulik; Yoo, Hyunseung; Evrard, Yvonne A.; Doroshow, James H.; Stevens, Rick L. 分享 收藏
分享 收藏
分享 收藏
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities Davis, James J.; Wattam, Alice R.; Aziz, Ramy K.; Brettin, Thomas; Butler, Ralph; Butler, Rory M.; Chlenski, Philippe; Conrad, Neal; Dickerman, Allan; Dietrich, Emily M.; Gabbard, Joseph L.; Gerdes, Svetlana; Guard, Andrew; Kenyon, Ronald W.; Machi, Dustin; Mao, Chunhong; Murphy-Olson, Dan; Nguyen, Marcus; Nordberg, Eric K.; Olsen, Gary J.; Olson, Robert D.; Overbeek, Jamie C.; Overbeek, Ross; Parrello, Bruce; Pusch, Gordon D.; Shukla, Maulik; Thomas, Chris; VanOeffelen, Margo; Vonstein, Veronika; Warren, Andrew S.; Xia, Fangfang; Xie, Dawen; Yoo, Hyunseung; Stevens, Rick 分享 收藏
AI Meets Exascale Computing: Advancing Cancer Research With Large-Scale High Performance Computing Bhattacharya, Tanmoy; Brettin, Thomas; Doroshow, James H.; Evrard, Yvonne A.; Greenspan, Emily J.; Gryshuk, Amy L.; Hoang, Thuc T.; Lauzon, Carolyn B. Vea; Nissley, Dwight; Penberthy, Lynne; Stahlberg, Eric; Stevens, Rick; Streitz, Fred; Tourassi, Georgia; Xia, Fangfang; Zaki, George 分享 收藏
.png){kind=icon}
未登录.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
.png){kind=icon}
