John A. Capra - Publications, H-index & Citations

John A. Capra

university of california

41H指数

241论文数

8.3K被引数

收录论文 78

发表时间

Comparing Neanderthal introgression maps reveals core agreement but substantial heterogeneity 比较尼安德特人基因渗入图谱揭示了核心一致性但存在显著异质性

Molecular Biology and Evolution

IF5.3

2026-03-13

OAAI

Yaen Chen; Keila Velazquez-Arcelay; John A Capra; null

Identifying deleterious noncoding variation through gain and loss of CTCF binding activity

AMERICAN JOURNAL OF HUMAN GENETICS

IF8.1

2025-04-01

OAAI

Tubbs, Colby; Benton, Mary Lauren; McArthur, Evonne; Capra, John A.; Ruderfer, Douglas M.

Mapping kinase domain resistance mechanisms for the MET receptor tyrosine kinase via deep mutational scanning

ELIFE

IF0

2025-02-17

OAAI

Estevam, Gabriella O.; Linossi, Edmond; Rao, Jingyou; Macdonald, Christian B.; Ravikumar, Ashraya; Chrispens, Karson M.; Capra, John A.; Coyote-Maestas, Willow; Pimentel, Harold; Collisson, Eric A.; Jura, Natalia; Fraser, James S.

Pre-conception clinical risk factors differ between spontaneous and indicated preterm birth in a densely phenotyped EHR cohort 备孕期临床风险因素在密集表型化的EHR队列中，于自发性早产与指征性早产之间存在差异。

BMC PREGNANCY AND CHILDBIRTH

IF2.7

2025-02-12

OAAI

Costello, Jean M.; Takasuka, Hannah; Roger, Jacquelyn; Yin, Ophelia; Tang, Alice; Oskotsky, Tomiko; Sirota, Marina; Capra, John A.

Exposure to autoimmune disorders is associated with increased Alzheimer's disease risk in a multi-site electronic health record analysis 暴露于自身免疫性疾病与多中心电子健康记录分析中阿尔茨海默病风险的增加相关

CELL REPORTS MEDICINE

IF10.6

2025-02-01

OAAI

Ramey, Grace D.; Tang, Alice; Phongpreecha, Thanaphong; Yang, Monica M.; Woldemariam, Sarah R.; Oskotsky, Tomiko T.; Montine, Thomas J.; Allen, Isabel; Miller, Zachary A.; Aghaeepour, Nima; Capra, John A.

Inferring human phenotypes using ancient DNA: from molecules to populations

CURRENT OPINION IN GENETICS & DEVELOPMENT

IF3.6

2025-02-01

PREAI

Ferrando-Bernal, Manuel; Brand, Colin M.; Capra, John A.

Machine Learning Reveals the Diversity of Human 3D Chromatin Contact Patterns

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2024-10-15

OAAI

Gilbertson, Erin N.; Brand, Colin M.; Mcarthur, Evonne; Rinker, David C.; Kuang, Shuzhen; Pollard, Katherine S.; Capra, John A.

Sequence-Based Machine Learning Reveals 3D Genome Differences between Bonobos and Chimpanzees 基于序列的机器学习揭示了倭黑猩猩和黑猩猩之间的3D基因组差异

GENOME BIOLOGY AND EVOLUTION

IF2.8

2024-10-09

OAAI

Brand, Colin M.; Kuang, Shuzhen; Gilbertson, Erin N.; McArthur, Evonne; Pollard, Katherine S.; Webster, Timothy H.; Capra, John A.

Disease-specific prioritization of non-coding GWAS variants based on chromatin accessibility

HUMAN GENETICS AND GENOMICS ADVANCES

IF3.6

2024-07-01

OAAI

Liang, Qianqian; Abraham, Abin; Capra, John A.; Kostka, Dennis

Illuminating the function of the orphan transporter, SLC22A10, in humans and other primates

NATURE COMMUNICATIONS

IF15.7

2024-05-23

OAAI

Yee, Sook Wah; Ferrandez-Peral, Luis; Alentorn-Moron, Pol; Fontsere, Claudia; Ceylan, Merve; Koleske, Megan L.; Handin, Niklas; Artegoitia, Virginia M.; Lara, Giovanni; Chien, Huan-Chieh; Zhou, Xujia; Dainat, Jacques; Zalevsky, Arthur; Sali, Andrej; Brand, Colin M.; Wolfreys, Finn D.; Yang, Jia; Gestwicki, Jason E.; Capra, John A.; Artursson, Per; Newman, John W.; Marques-Bonet, Tomas; Giacomini, Kathleen M.

Human gene regulatory evolution is driven by the divergence of regulatory element function in both cis and trans

CELL GENOMICS

IF9

2024-04-01

OAAI

Hansen, Tyler J.; Fong, Sarah L.; Day, Jessica K.; Capra, John A.; Hodges, Emily

Archaic Introgression Shaped Human Circadian Traits 古语渐渗塑造了人类的昼夜节律特征

GENOME BIOLOGY AND EVOLUTION

IF2.8

2023-12-14

OAAI

Velazquez-Arcelay, Keila; Colbran, Laura L.; McArthur, Evonne; Brand, Colin M.; Rinker, David C.; Siemann, Justin K.; McMahon, Douglas G.; Capra, John A.

Cis-regulatory Landscape Size, Constraint, and Tissue Specificity Associate with Gene Function and Expression 顺式调节景观大小，约束和组织特异性与基因功能和表达相关

GENOME BIOLOGY AND EVOLUTION

IF2.8

2023-07-06

OAAI

Benton, Mary Lauren; Ruderfer, Douglas M.; Capra, John A.

Resurrecting the alternative splicing landscape of archaic hominins using machine learning

NATURE ECOLOGY & EVOLUTION

IF14.5

2023-05-04

OAAI

Brand, Colin M.; Colbran, Laura L.; Capra, John A.

Clinical characteristics and electrophysiologic properties of SCN5A variants in fever-induced Brugada syndrome

EBIOMEDICINE

IF10.8

2023-01-01

OAAI

Chen, Gan-Xiao; Barajas-Martinez, Hector; Ciconte, Giuseppe; Wu, Cheng-, I; Monasky, Michelle M.; Xia, Hao; Li, Bian; Capra, John A.; Guo, Kai; Zhang, Zhong-He; Chen, Xiu; Yang, Bo; Jiang, Hong; Tse, Gary; Mak, Chloe Miu; Aizawa, Yoshiyasu; Gollob, Michael H.; Antzelevitch, Charles; Wilde, Arthur A. M.; Pappone, Carlo; Hu, Dan

Mosaic patterns of selection in genomic regions associated with diverse human traits 与不同人类特征相关的基因组区域选择的镶嵌模式

PLOS GENETICS

IF3.7

2022-11-07

OAAI

Abraham, Abin; LaBella, Abigail L.; Capra, John A.; Rokas, Antonis

Nucleoporins facilitate ORC loading onto chromatin

CELL REPORTS

IF6.9

2022-11-01

OAAI

Richards, Logan; Lord, Christopher L.; Benton, Mary Lauren; Capra, John A.; Nordman, Jared T.

Function and Constraint in Enhancer Sequences with Multiple Evolutionary Origins

GENOME BIOLOGY AND EVOLUTION

IF2.8

2022-10-31

OAAI

Fong, Sarah L.; Capra, John A.

Personalized structural biology reveals the molecular mechanisms underlying heterogeneous epileptic phenotypes caused by de novo KCNC2 variants

HUMAN GENETICS AND GENOMICS ADVANCES

IF3.6

2022-10-01

OAAI

Mukherjee, Souhrid; Cassini, Thomas A.; Hu, Ningning; Yang, Tao; Li, Bian; Shen, Wangzhen; Moth, Christopher W.; Rinker, David C.; Sheehan, Jonathan H.; Cogan, Joy D.; Newman, John H.; Hamid, Rizwan; Macdonald, Robert L.; Roden, Dan M.; Meiler, Jens; Kuenze, Georg; Phillips, John A.; Capra, John A.

Dense phenotyping from electronic health records enables machine learning-based prediction of preterm birth

BMC MEDICINE

IF8.3

2022-09-28

OAAI

Abraham, Abin; Le, Brian; Kosti, Idit; Straub, Peter; Velez-Edwards, Digna R.; Davis, Lea K.; Newton, J. M.; Muglia, Louis J.; Rokas, Antonis; Bejan, Cosmin A.; Sirota, Marina; Capra, John A.

研究方向