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J

John P. Vogel

department of energy joint genome institute

58H指数
248论文数
1.2W被引数
收录论文 39
发表时间
EcoBOT: an AI/ML enabled automated phenotyping capability for model plantsEcoBOT:一种为模型植物提供的、具备AI/ML功能的自动化表型分析能力
err2025-12-02
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errPeter F. Andeer; Petrus H. Zwart; Daniela Ushizima; Marcus M. Noack; Lloyd T. Cornmesser; Thomas M. Vess†; Zineb Sordo; Stephen Tan; Joseph Zorzi; Chelsea Hernandez; Vlastimil Novak; Yezhang Ding; John P. Vogel; Benjamin P. Bowen; James A. Sethian; Trent R. Northen
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Breeding of microbiomes conferring salt tolerance to plants赋予植物耐盐性的微生物组育种
err2025-11-27
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errCaio Guilherme Pereira; Joseph A. Edwards; Albina Khasanova; Alexis Carlson; Vanessa Brisson; Estelle Schaefer; Tijana Glavina del Rio; Susannah Tringe; John P. Vogel; David L. Des Marais; Thomas E. Juenger; Ulrich G. Mueller
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Enhancers in Plant Development, Adaptation and Evolution
err2024-10-16
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errBeernink, Bliss M.; Vogel, John P.; Lei, Li
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CO2 response screen in grass Brachypodium reveals the key role of a MAP kinase in CO2-triggered stomatal closure
err2024-05-06
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errLopez, Bryn N. K.; Ceciliato, Paulo H. O.; Takahashi, Yohei; Rangel, Felipe J.; Salem, Evana A.; Kernig, Klara; Chow, Kelly; Zhang, Li; Sidhom, Morgana A.; Seitz, Christian G.; Zheng, Tingwen; Sibout, Richard; Laudencia-Chingcuanco, Debbie L.; Woods, Daniel P.; McCammon, James Andrew; Vogel, John P.; Schroeder, Julian, I
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Transposition of HOPPLA in siRNA-deficient plants suggests a limited effect of the environment on retrotransposon mobility in Brachypodium distachyon
err2024-03-12
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errThieme, Michael; Minadakis, Nikolaos; Himber, Christophe; Keller, Bettina; Xu, Wenbo; Rutowicz, Kinga; Matteoli, Calvin; Boehrer, Marcel; Rymen, Bart; Laudencia-Chingcuanco, Debbie; Vogel, John P.; Sibout, Richard; Stritt, Christoph; Blevins, Todd; Roulin, Anne C.
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdomJGI植物基因图谱: 一个可更新的转录组资源,用于改善植物王国的功能基因描述
err2023-08-01
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errSreedasyam, Avinash; Plott, Christopher; Hossain, Md Shakhawat; Lovell, John T.; Grimwood, Jane; Jenkins, Jerry W.; Daum, Christopher; Barry, Kerrie; Carlson, Joseph; Shu, Shengqiang; Phillips, Jeremy; Amirebrahimi, Mojgan; Zane, Matthew; Wang, Mei; Goodstein, David; Haas, Fabian B.; Hiss, Manuel; Perroud, Pierre-Francois; Jawdy, Sara S.; Yang, Yongil; Hu, Rongbin; Johnson, Jenifer; Kropat, Janette; Gallaher, Sean D.; Lipzen, Anna; Shakirov, Eugene, V; Weng, Xiaoyu; Torres-Jerez, Ivone; Weers, Brock; Conde, Daniel; Pappas, Marilia R.; Liu, Lifeng; Muchlinski, Andrew; Jiang, Hui; Shyu, Christine; Huang, Pu; Sebastian, Jose; Laiben, Carol; Medlin, Alyssa; Carey, Sankalpi; Carrell, Alyssa A.; Chen, Jin-Gui; Perales, Mariano; Swaminathan, Kankshita; Allona, Isabel; Grattapaglia, Dario; Cooper, Elizabeth A.; Tholl, Dorothea; Vogel, John P.; Weston, David J.; Yang, Xiaohan; Brutnell, Thomas P.; Kellogg, Elizabeth A.; Baxter, Ivan; Udvardi, Michael; Tang, Yuhong; Mockler, Todd C.; Juenger, Thomas E.; Mullet, John; Rensing, Stefan A.; Tuskan, Gerald A.; Merchant, Sabeeha S.; Stacey, Gary; Schmutz, Jeremy
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PHYTOCHROME C regulation of photoperiodic flowering via PHOTOPERIOD1 is mediated by EARLY FLOWERING 3 in Brachypodium distachyon
err2023-05-10
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errWoods, Daniel P.; Li, Weiya; Sibout, Richard P.; Shao, Mingqin; Laudencia-Chingcuanco, Debbie M.; Vogel, John P.; Dubcovsky, Jorge; Amasino, Richard M.
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Regulation of hair cell and stomatal size by a hair cell-specific peroxidase in the grass Brachypodium distachyon
err2023-05-01
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errNunes, Tiago D. G.; Berg, Lea S.; Slawinska, Magdalena W.; Zhang, Dan; Redt, Leonie; Sibout, Richard; Vogel, John P.; Laudencia-Chingcuanco, Debbie; Jesenofsky, Barbara; Lindner, Heike; Raissig, Michael T.
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Multiple origins, one evolutionary trajectory: gradual evolution characterizes distinct lineages of allotetraploid Brachypodium
err2022-10-11
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errScarlett, Virginia T.; Lovell, John T.; Shao, Mingqin; Phillips, Jeremy; Shu, Shengqiang; Lusinska, Joanna; Goodstein, David M.; Jenkins, Jerry; Grimwood, Jane; Barry, Kerrie; Chalhoub, Boulos; Schmutz, Jeremy; Hasterok, Robert; Catalan, Pilar; Vogel, John P.
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Brachypodium: 20 years as a grass biology model the forward?
err2022-10-01
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errHasterok, Robert; Catalan, Pilar; Hazen, Samuel P.; Roulin, Anne C.; Vogel, John P.; Wang, Kai; Mur, Luis A. J.
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Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities
err2022-07-05
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errGao, Cheng; Xu, Ling; Montoya, Liliam; Madera, Mary; Hollingsworth, Joy; Chen, Liang; Purdom, Elizabeth; Singan, Vasanth; Vogel, John; Hutmacher, Robert B.; Dahlberg, Jeffery A.; Coleman-Derr, Devin; Lemaux, Peggy G.; Taylor, John W.
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KARRIKIN INSENSITIVE2 regulates leaf development, root system architecture and arbuscular-mycorrhizal symbiosis in Brachypodium distachyon
err2022-02-23
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errMeng, Yongjie; Varshney, Kartikye; Incze, Norbert; Badics, Eszter; Kamran, Muhammad; Davies, Sabrina F.; Oppermann, Larissa M. F.; Magne, Kevin; Dalmais, Marion; Bendahmane, Abdel; Sibout, Richard; Vogel, John; Laudencia-Chingcuanco, Debbie; Bond, Charles S.; Soos, Vilmos; Gutjahr, Caroline; Waters, Mark T.
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The recent evolutionary rescue of a staple crop depended on over half a century of global germplasm exchange
err2022-02-11
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errMuleta, Kebede T.; Felderhoff, Terry; Winans, Noah; Walstead, Rachel; Charles, Jean Rigaud; Armstrong, J. Scott; Mamidi, Sujan; Plott, Chris; Vogel, John P.; Lemaux, Peggy G.; Mockler, Todd C.; Grimwood, Jane; Schmutz, Jeremy; Pressoir, Gael; Morris, Geoffrey P.
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Tracking the ancestry of known and 'ghost' homeologous subgenomes in model grass Brachypodium polyploids
err2022-02-08
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errSancho, Ruben; Inda, Luis A.; Diaz-Perez, Antonio; Des Marais, David L.; Gordon, Sean; Vogel, John P.; Lusinska, Joanna; Hasterok, Robert; Contreras-Moreira, Bruno; Catalan, Pilar
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Plant single-cell solutions for energy and the environment
err2021-08-12
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errCole, Benjamin; Bergmann, Dominique; Blaby-Haas, Crysten E.; Blaby, Ian K.; Bouchard, Kristofer E.; Brady, Siobhan M.; Ciobanu, Doina; Coleman-Derr, Devin; Leiboff, Samuel; Mortimer, Jenny C.; Nobori, Tatsuya; Rhee, Seung Y.; Schmutz, Jeremy; Simmons, Blake A.; Singh, Anup K.; Sinha, Neelima; Vogel, John P.; O'Malley, Ronan C.; Visel, Axel; Dickel, Diane E.
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Gradual polyploid genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors
err2020-07-29
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errGordon, Sean P.; Contreras-Moreira, Bruno; Levy, Joshua J.; Djamei, Armin; Czedik-Eysenberg, Angelika; Tartaglio, Virginia S.; Session, Adam; Martin, Joel; Cartwright, Amy; Katz, Andrew; Singan, Vasanth R.; Goltsman, Eugene; Barry, Kerrie; Vinh Ha Dinh-Thi; Chalhoub, Boulos; Diaz-Perez, Antonio; Sancho, Ruben; Lusinska, Joanna; Wolny, Elzbieta; Nibau, Candida; Doonan, John H.; Mur, Luis A. J.; Plott, Chris; Jenkins, Jerry; Hazen, Samuel P.; Lee, Scott J.; Shu, Shengqiang; Goodstein, David; Rokhsar, Daniel; Schmutz, Jeremy; Hasterok, Robert; Catalan, Pilar; Vogel, John P.
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