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C

Craig J. Benham

University of California System

41H指数
146论文数
5.2K被引数
收录论文 31
发表时间
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TORCphysics: a physical model of DNA-topology-controlled gene expressionTORCphysics：一种DNA拓扑结构调控基因表达的物理模型
errNucleic Acids Research
IF13.1
err2026-02-27
err0
PREAI
errVelasco-Berrelleza, Victor; Rainford, Penn Faulkner; Mogre, Aalap; Benham, Craig J.; Dorman, Charles J.; Kroger, Carsten; Stepney, Susan; Harris, Sarah A.
err分享
err收藏
DNA superhelicity
errNUCLEIC ACIDS RESEARCH
IF13.1
err2023-11-22
err1
errOAAI
errBenham, Craig J.
err分享
err收藏
Non-equilibrium structural dynamics of supercoiled DNA plasmids exhibits asymmetrical relaxation
errNUCLEIC ACIDS RESEARCH
IF13.1
err2022-02-21
err7
errOAAI
errShaheen, Cynthia; Hastie, Cameron; Metera, Kimberly; Scott, Shane; Zhang, Zhi; Chen, Sitong; Gu, Gracia; Weber, Lisa; Munsky, Brian; Kouzine, Fedor; Levens, David; Benham, Craig; Leslie, Sabrina
err分享
err收藏
FUBP1 and FUBP2 enforce distinct epigenetic setpoints for MYC expression in primary single murine cells
errCOMMUNICATIONS BIOLOGY
IF5.1
err2020-10-01
err9
errOAAI
errZheng, Ying; Dubois, Wendy; Benham, Craig; Batchelor, Eric; Levens, David
err分享
err收藏
Emerging roles for R-loop structures in the management of topological stressR环结构在拓扑应力管理中的新兴作用
errJOURNAL OF BIOLOGICAL CHEMISTRY
IF3.9
err2020-04-01
err68
errOAAI
errChedin, Frederic; Benham, Craig J.
err分享
err收藏
Single-molecule visualization of the effects of ionic strength and crowding on structure-mediated interactions in supercoiled DNA molecules
errNUCLEIC ACIDS RESEARCH
IF13.1
err2019-05-20
err15
errOAAI
errScott, Shane; Shaheen, Cynthia; McGuinness, Brendon; Metera, Kimberly; Kouzine, Fedor; Levens, David; Benham, Craig J.; Leslie, Sabrina
err分享
err收藏
Interplay between DNA sequence and negative superhelicity drives R-loop structuresDNA序列与负超螺旋之间的相互作用驱动R环结构
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2019-03-08
err98
errOAAI
errStolz, Robert; Sulthana, Shaheen; Hartono, Stella R.; Malig, Maika; Benham, Craig J.; Chedin, Frederic
err分享
err收藏
Single Molecule Imaging of DNA Structure: CLIC Microscopy Powers Mechanistic Insights for Drug Development
errBIOPHYSICAL JOURNAL
IF3.1
err2019-02-01
err1
errOAAI
errStabile, Francis; Shaheen, Cynthia; Scott, Shane; Berard, Daniel; Levens, David; Benham, Craig; Leslie, Sabrina
err分享
err收藏
Visualizing structure-mediated interactions in supercoiled DNA molecules
errNUCLEIC ACIDS RESEARCH
IF13.1
err2018-04-19
err28
errOAAI
errScott, Shane; Xu, Zhi Ming; Kouzine, Fedor; Berard, Daniel J.; Shaheen, Cynthia; Gravel, Barbara; Saunders, Laura; Hofkirchner, Alexander; Leroux, Catherine; Laurin, Jill; Levens, David; Benham, Craig J.; Leslie, Sabrina R.
err分享
err收藏
Permanganate/S1 Nuclease Footprinting Reveals Non-B DNA Structures with Regulatory Potential across a Mammalian Genome
errCELL SYSTEMS
IF7.7
err2017-03-01
err166
errOAAI
errKouzine, Fedor; Wojtowicz, Damian; Baranello, Laura; Yamane, Arito; Nelson, Steevenson; Resch, Wolfgang; Kieffer-Kwon, Kyong-Rim; Benham, Craig J.; Casellas, Rafael; Przytycka, Teresa M.; Levens, David
err分享
err收藏
Single Molecule Visualization of Topology-Mediated Interactions in Supercoiled DNA
errBIOPHYSICAL JOURNAL
IF3.1
err2017-02-01
err0
errOAAI
errScott, Shane; Xu, Zhi Ming; Kouzine, Fedor; Berard, Daniel; Shaheen, Cynthia; Saunders, Laura; Gravel, Barbara; Leroux, Catherine; Cayen-Cyr, Christopher; Levens, David; Benham, Craig; Leslie, Sabrina
err分享
err收藏
Long-range correlations in the mechanics of small DNA circles under topological stress revealed by multi-scale simulation
errNUCLEIC ACIDS RESEARCH
IF13.1
err2016-09-22
err49
errOAAI
errSutthibutpong, Thana; Matek, Christian; Benham, Craig; Slade, Gabriel G.; Noy, Agnes; Laughton, Charles; Doye, Jonathan P. K.; Louis, Ard A.; Harris, Sarah A.
err分享
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Potential non-B DNA regions in the human genome are associated with higher rates of nucleotide mutation and expression variation
errNUCLEIC ACIDS RESEARCH
IF13.1
err2014-10-21
err46
errOAAI
errDu, Xiangjun; Gertz, E. Michael; Wojtowicz, Damian; Zhabinskaya, Dina; Levens, David; Benham, Craig J.; Schaeffer, Alejandro A.; Przytycka, Teresa M.
err分享
err收藏
Competitive superhelical transitions involving cruciform extrusion
errNUCLEIC ACIDS RESEARCH
IF13.1
err2013-08-22
err21
errOAAI
errZhabinskaya, Dina; Benham, Craig J.
err分享
err收藏
The genome-wide distribution of non-B DNA motifs is shaped by operon structure and suggests the transcriptional importance of non-B DNA structures in Escherichia coli
errNUCLEIC ACIDS RESEARCH
IF13.1
err2013-04-25
err48
errOAAI
errDu, Xiangjun; Wojtowicz, Damian; Bowers, Albert A.; Levens, David; Benham, Craig J.; Przytycka, Teresa M.
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err收藏
Theoretical Analysis of Competing Conformational Transitions in Superhelical DNA
errplos biology
IF3.6
err2012-04-26
err26
errOAAI
errZhabinskaya, Dina; Benham, Craig J.
err分享
err收藏
OriDB: a DNA replication origin database
errNUCLEIC ACIDS RESEARCH
IF13.1
err2006-11-07
err158
errOAAI
errNieduszynski, Conrad A.; Hiraga, Shin-ichiro; Ak, Prashanth; Benham, Craig J.; Donaldson, Anne D.
err分享
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Integration site choice of a feline immunodeficiency virus vector
errJOURNAL OF VIROLOGY
IF3.8
err2006-09-01
err51
errOAAI
errKang, Yubin; Moressi, Christopher J.; Scheetz, Todd E.; Xie, Litao; Tran, Diane Thi; Casavant, Thomas L.; Ak, Prashanth; Benham, Craig J.; Davidson, Beverly L.; McCray, Paul B., Jr.
err分享
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Brownian dynamics simulations of sequence-dependent duplex denaturation in dynamically superhelical DNA
errJOURNAL OF CHEMICAL PHYSICS
IF3.1
err2005-09-28
err30
PREAI
errMielke, SP; Gronbech-Jensen, N; Krishnan, VV; Fink, WH; Benham, CJ
err分享
err收藏
DNA mechanicsDNA力学
errANNUAL REVIEW OF BIOMEDICAL ENGINEERING
IF9.6
err2005-08-15
err77
PREAI
errBenham, CJ; Mielke, SP
err分享
err收藏

研究方向

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合作学者
合作期刊
B
Beverly L. Davidson
H 指数: 99 · 论文数: 439
P
Paul B. McCray
H 指数: 95 · 论文数: 366
A
Alejandro A. Schäffer
H 指数: 79 · 论文数: 711
S
Siegfried Weiß
H 指数: 64 · 论文数: 229
R
Rafael Casellas
H 指数: 64 · 论文数: 139
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