Simon Rasmussen - Publications, H-index & Citations

Simon Rasmussen

university of copenhagen

74H指数

260论文数

3.7W被引数

收录论文 78

发表时间

Multi-organ proteomic atlas of obesity regression in male mice 肥胖逆转在雄性小鼠中的多器官蛋白质组学图谱

Nature Metabolism

IF20.8

2026-08-21

PREAI

Felix Boel; Ellen Gammelmark Klinggaard; Vyacheslav Akimov; Daniel Hansen; M. L. Uthpala; Babukrishna Maniyadath; Flora Reincke Fuglsang; Marc Pielies Avellí; Simon Rasmussen; Kim Ravnskjær; Susanne Mandrup; Blagoy Blagoev

Predicting olanzapine induced BMI increase using machine learning on population-based electronic health records 利用机器学习基于人口基础电子健康记录预测奥氮平诱导的BMI增加

BMC Psychiatry

IF3.6

2026-07-28

OAAI

Foteini Aktypi; Michael E. Benros; Simon Rasmussen

Improving metagenome binning by integrating intrinsic features and taxonomy 通过整合内在特征与分类学信息提升宏基因组分箱性能

Nature Biotechnology

IF41.7

2026-04-27

OAAI

Svetlana Kutuzova; Pau Piera Líndez; Lasse Schnell Danielsen; Knud Nor Nielsen; Nikoline S. Olsen; Leise Riber; Alex Gobbi; Laura Milena Forero-Junco; Peter Erdmann Dougherty; Jesper Cairo Westergaard; Patrick Denis Browne; Svend Christensen; Lars Hestbjerg Hansen; Mads Nielsen; Jakob Nybo Andersen; Simon Rasmussen

Translational bioinformatics stalls at implementation 转化生物信息学在实施中停滞

Briefings in Bioinformatics

IF7.7

2026-04-17

OAAI

Lars Rønn Olsen; Helene Scheel Wegener; Puck Quarles van Ufford; Aimilia Schina; Frederik Kirk; Anne K Winding; Birgitte Hagelskjær; Chelsea Lennox; Chloe Pittman; Christopher T B Strømblad; Ida K Buhl; Inigo P Luengo; Mads Bonde; Majbritt B Madsen; Mikail Gögenur; Morten Rasmussen; Nicolas Rapin; Hermina Jakupovic; Simon Rasmussen; Tiara Dusselier; Michael Krauthammer; Ole Lund; Signe Modvig; Frederik O Bagger

Machine learning applied to echocardiographic deformation curves for prediction of heart failure and cardiovascular death 机器学习应用于超声心动图变形曲线以预测心力衰竭和心血管死亡

International Journal of Cardiology

IF3.2

2026-04-09

OAAI

Jakob Øystein Simonsen; Rune Højlund; Daniel Modin; Kristoffer Grundtvig Skaarup; Flemming Javier Olsen; Jacob Christensen; Mats Christian Højbjerg Lassen; Niklas Dyrby Johansen; Sergio Sánchez-Martínez; Brian Lee Claggett; Jacob Louis Marott; Magnus T. Jensen; Gorm B. Jensen; Peter Schnohr; Rasmus Møgelvang; Søren Zöga Diederichsen; Lucas Yixi Xing; Lars Køber; Jesper Hastrup Svendsen; Simon Rasmussen

Complex genetic effects linked to plasma protein abundance in the UK Biobank 与英国生物银行血浆蛋白丰度相关的复杂遗传效应

Nature Communications

IF15.7

2025-12-14

OAAI

Arnor I. Sigurdsson; Justus F. Gräf; Zhiyu Yang; Kirstine Ravn; Jonas Meisner; Roman Thielemann; Henry Webel; Roelof A. J. Smit; Lili Niu; Matthias Mann; Bjarni Vilhjalmsson; Benjamin M. Neale; Jens-Christian Holm; Andrea Ganna; Torben Hansen; Ruth J. F. Loos; Simon Rasmussen

Pre-European contact leprosy in the Americas and its current persistence 欧洲接触前美洲的麻风病及其当前的持续存在

Science

IF45.8

2025-05-29

PREAI

Maria Lopopolo; Charlotte Avanzi; Sebastian Duchene; Pierre Luisi; Alida de Flamingh; Gabriel Yaxal Ponce-Soto; Gaetan Tressieres; Sarah Neumeyer; Frédéric Lemoine; Elizabeth A. Nelson; Miren Iraeta-Orbegozo; Jerome S. Cybulski; Joycelynn Mitchell; Vilma T. Marks; Linda B. Adams; John Lindo; Michael DeGiorgio; Nery Ortiz; Carlos Wiens; Juri Hiebert; Alexandro Bonifaz; Griselda Montes de Oca; Vanessa Paredes-Solis; Carlos Franco-Paredes; Lucio Vera-Cabrera; José G. Pereira Brunelli; Mary Jackson; John S. Spencer; Claudio G. Salgado; Xiang-Yang Han; Camron M. Pearce; Alaine K. Warren; Patricia S. Rosa; Amanda J. de Finardi; Andréa de F. F. Belone; Cynthia Ferreira; Philip N. Suffys; Amanda N. Brum Fontes; Sidra E. G. Vasconcellos; Roxane Schaub; Pierre Couppié; Kinan Drak Alsibai; Rigoberto Hernández-Castro; Mayra Silva Miranda; Iris Estrada-Garcia; Fermin Jurado-Santacruz; Ludovic Orlando; Hannes Schroeder; Lluis Quintana-Murci; Mariano Del Papa; Ramanuj Lahiri; Ripan S. Malhi; Simon Rasmussen; Nicolás Rascovan

Personalized molecular signatures of insulin resistance and type 2 diabetes 胰岛素抵抗和2型糖尿病的个性化分子特征

Cell

IF42.5

2025-05-27

OAAI

Jeppe Kjærgaard; Ben Stocks; John Henderson; Jordana B. Freemantle; David Rizo-Roca; Michele Puglia; Maria Madrazo Montoya; Daniel Andersson; Jesper Bäckdahl; Daniel Eriksson-Hogling; Jacob V. Stidsen; Michael Wierer; Simon Rasmussen; Kei Sakamoto; Kurt Højlund; Mikael Rydén; Juleen R. Zierath; Anna Krook; Atul S. Deshmukh

Gut heavy metal and antibiotic resistome of humans living in the high Arctic 生活在北极地区的人类的肠道重金属和抗生素抗性组

FRONTIERS IN MICROBIOLOGY

IF4.5

2024-10-30

OAAI

Hauptmann, Aviaja Lyberth; Johansen, Joachim; Staeger, Frederik Filip; Nielsen, Dennis Sandris; Mulvad, Gert; Hanghoj, Kristian; Rasmussen, Simon; Hansen, Torben; Albrechtsen, Anders

Taxometer: Improving taxonomic classification of metagenomics contigs Taxometer: 改进宏基因组学重叠群的分类学分类

NATURE COMMUNICATIONS

IF15.7

2024-09-27

OAAI

Kutuzova, Svetlana; Nielsen, Mads; Piera, Pau; Nissen, Jakob Nybo; Rasmussen, Simon

Imputation of label-free quantitative mass spectrometry-based proteomics data using self-supervised deep learning 基于自监督深度学习的无标记定量质谱蛋白质组学数据插补

NATURE COMMUNICATIONS

IF15.7

2024-06-26

OAAI

Webel, Henry; Niu, Lili; Nielsen, Annelaura Bach; Locard-Paulet, Marie; Mann, Matthias; Jensen, Lars Juhl; Rasmussen, Simon

The evolutionary impact of childhood cancer on the human gene pool

NATURE COMMUNICATIONS

IF15.7

2024-02-29

OAAI

Stoltze, Ulrik Kristoffer; Foss-Skiftesvik, Jon; Hansen, Thomas van Overeem; Rasmussen, Simon; Karczewski, Konrad J.; Wadt, Karin A. W.; Schmiegelow, Kjeld

Markers of inflammation predict survival in newly diagnosed cirrhosis: a prospective registry study

SCIENTIFIC REPORTS

IF3.9

2023-11-16

OAAI

Kronborg, Thit Mynster; Webel, Henry; O'Connell, Malene Barfod; Danielsen, Karen Vagner; Hobolth, Lise; Moller, Soren; Jensen, Rasmus Tanderup; Bendtsen, Flemming; Hansen, Torben; Rasmussen, Simon; Juel, Helene Baek; Kimer, Nina

Adversarial and variational autoencoders improve metagenomic binning

COMMUNICATIONS BIOLOGY

IF5.1

2023-10-21

OAAI

Lindez, Pau Piera; Johansen, Joachim; Kutuzova, Svetlana; Sigurdsson, Arnor Ingi; Nissen, Jakob Nybo; Rasmussen, Simon

Genetic analysis of blood molecular phenotypes reveals common properties in the regulatory networks affecting complex traits 血液分子表型的遗传分析揭示了影响复杂性状的调控网络中的共同特性

NATURE COMMUNICATIONS

IF15.7

2023-08-21

OAAI

Brown, Andrew A.; Fernandez-Tajes, Juan A.; Hong, Mun-gwan W.; Brorsson, Caroline A.; Koivula, Robert W.; Davtian, David; Dupuis, Theo; Sartori, Ambra M.; Michalettou, Theodora-Dafni; Forgie, Ian H.; Adam, Jonathan; Allin, Kristine; Caiazzo, Robert; Cederberg, Henna; De Masi, Federico N.; Elders, Petra J. M.; Giordano, Giuseppe; Haid, Mark; Hansen, Torben; Hansen, Tue H.; Hattersley, Andrew T.; Heggie, Alison G.; Howald, Cedric; Jones, Angus G.; Kokkola, Tarja; Laakso, Markku; Mahajan, Anubha; Mari, Andrea; McDonald, Timothy J.; McEvoy, Donna; Mourby, Miranda; Musholt, Petra B.; Nilsson, Birgitte; Pattou, Francois; Penet, Deborah; Raverdy, Violeta; Ridderstrale, Martin; Romano, Luciana; Rutters, Femke; Sharma, Sapna; Teare, Harriet D.; 't Hart, Leen; Tsirigos, Konstantinos D.; Vangipurapu, Jagadish; Vestergaard, Henrik; Brunak, Soren; Franks, Paul; Frost, Gary; Grallert, Harald I.; Jablonka, Bernd; McCarthy, Mark, I; Pavo, Imre; Pedersen, Oluf; Ruetten, Hartmut; Walker, Mark; Adamski, Jerzy; Schwenk, Jochen M.; Pearson, Ewan R.; Dermitzakis, Emmanouil T.; Vinuela, Ana; Adragni, Kofi; Allesoe, Rosa Lundbye L. A.; Artati, Anna; Arumugam, Manimozhiyan; Atabaki-Pasdar, Naeimeh; Baltauss, Tania; Banasik, Karina; Barnett, Anna L.; Baum, Patrick; Bell, Jimmy D.; Beulens, Joline B.; Bianzano, Susanna; Bizzotto, Roberto; Bonnefond, Amelie; Cabrelli, Louise; Dale, Matilda; Dawed, Adem Y.; de Preville, Nathalie; Dekkers, Koen F.; Deshmukh, Harshal A.; Dings, Christiane; Donnelly, Louise; Dutta, Avirup; Ehrhardt, Beate; Engelbrechtsen, Line; Eriksen, Rebeca; Fan, Yong; Ferrer, Jorge; Fitipaldi, Hugo; Forman, Annemette; Fritsche, Andreas; Froguel, Philippe; Gassenhuber, Johann; Gough, Stephen; Graefe-Mody, Ulrike; Grempler, Rolf; Groeneveld, Lenka; Groop, Leif; Gudmundsdottir, Valborg; Gupta, Ramneek; Hennige, Anita M. H.; Hill, Anita V.; Holl, Reinhard W.; Hudson, Michelle; Jacobsen, Ulrik Plesner; Jennison, Christopher; Johansen, Joachim; Jonsson, Anna; Karaderi, Tugce; Kaye, Jane; Kennedy, Gwen; Klintenberg, Maria; Kuulasmaa, Teemu; Lehr, Thorsten; Loftus, Heather; Lundgaard, Agnete Troen T.; Mazzoni, Gianluca; McRobert, Nicky; McVittie, Ian; Nice, Rachel; Nicolay, Claudia; Nijpels, Giel N.; Palmer, Colin K.; Pedersen, Helle H.; Perry, Mandy H.; Pomares-Millan, Hugo; Prehn, Cornelia P.; Ramisch, Anna; Rasmussen, Simon; Robertson, Neil; Rodriquez, Marianne; Sackett, Peter; Scherer, Nina; Shah, Nisha; Sihinevich, Iryna; Slieker, Roderick C.; Sondertoft, Nadja B.; Steckel-Hamann, Birgit; Thomas, Melissa K.; Thomas, Cecilia Engel E.; Thomas, Elizabeth Louise L.; Thorand, Barbara; Thorne, Claire E.; Tillner, Joachim; Tura, Andrea; Uhlen, Mathias; van Leeuwen, Nienke; van Oort, Sabine; Verkindt, Helene; Vogt, Josef; Wad Sackett, Peter W.; Wesolowska-Andersen, Agata; Whitcher, Brandon; White, Margaret W.

Global within-species phylogenetics of sewage microbes suggest that local adaptation shapes geographical bacterial clustering

COMMUNICATIONS BIOLOGY

IF5.1

2023-07-08

OAAI

Jespersen, Marie Louise; Munk, Patrick; Johansen, Joachim; Kaas, Rolf Sommer; Webel, Henry; Vigre, Hakan; Nielsen, Henrik Bjorn; Rasmussen, Simon; Aarestrup, Frank M.

Deep integrative models for large-scale human genomics 大规模人类基因组学的深度整合模型

NUCLEIC ACIDS RESEARCH

IF13.1

2023-05-24

OAAI

Sigurdsson, Arnor, I; Louloudis, Ioannis; Banasik, Karina; Westergaard, David; Winther, Ole; Lund, Ole; Ostrowski, Sisse Rye; Erikstrup, Christian; Pedersen, Ole Birger Vesterager; Nyegaard, Mette; Brunak, Soren; Vilhjalmsson, Bjarni J.; Rasmussen, Simon

Discovery of drug-omics associations in type 2 diabetes with generative deep-learning models (vol 41, pg 399, 2023)2型糖尿病与生成性深度学习模型的药物组学关联的发现 (第41卷，399页，2023)

NATURE BIOTECHNOLOGY

IF41.7

2023-05-02

OAAI

Allesoe, Rosa Lundbye; Lundgaard, Agnete Troen; Hernandez Medina, Ricardo; Aguayo-Orozco, Alejandro; Johansen, Joachim; Nissen, Jakob Nybo; Brorsson, Caroline; Mazzoni, Gianluca; Niu, Lili; Biel, Jorge Hernansanz; Leal Rodriguez, Cristina; Brasas, Valentas; Webel, Henry; Benros, Michael Eriksen; Pedersen, Anders Gorm; Chmura, Piotr Jaroslaw; Jacobsen, Ulrik Plesner; Mari, Andrea; Koivula, Robert; Mahajan, Anubha; Vinuela, Ana; Tajes, Juan Fernandez; Sharma, Sapna; Haid, Mark; Hong, Mun-Gwan B.; Musholt, Petra; De Masi, Federico; Vogt, Josef; Pedersen, Helle Krogh; Gudmundsdottir, Valborg; Jones, Angus; Kennedy, Gwen; Bell, Jimmy; Thomas, E. Louise; Frost, Gary; Thomsen, Henrik; Hansen, Elizaveta; Hansen, Tue Haldor; Vestergaard, Henrik; Muilwijk, Mirthe T.; Blom, Marieke M.; 't Hart, Leen; Pattou, Francois; Raverdy, Violeta; Brage, Soren; Kokkola, Tarja; Heggie, Alison; McEvoy, Donna; Mourby, Miranda; Kaye, Jane; Hattersley, Andrew; McDonald, Timothy; Ridderstrale, Martin; Walker, Mark; Forgie, Ian N.; Giordano, Giuseppe; Pavo, Imre; Ruetten, Hartmut; Pedersen, Oluf; Hansen, Torben; Dermitzakis, Emmanouil W.; Franks, Paul M.; Schwenk, Jochen; Adamski, Jerzy I.; McCarthy, Mark; Pearson, Ewan; Banasik, Karina; Rasmussen, Simon; Brunak, Soren

Genetic predisposition and evolutionary traces of pediatric cancer risk: a prospective 5-year population-based genome sequencing study of children with CNS tumors

NEURO-ONCOLOGY

IF13.4

2023-04-06

PREAI

Stoltze, Ulrik Kristoffer; Foss-Skiftesvik, Jon; Hansen, Thomas van Overeem; Byrjalsen, Anna; Sehested, Astrid; Scheie, David; Mikkelsen, Torben Stamm; Rasmussen, Simon; Bak, Mads; Okkels, Henrik; Callesen, Michael Thude; Skjoth-Rasmussen, Jane; Gerdes, Anne-Marie; Schmiegelow, Kjeld; Mathiasen, Rene; Wadt, Karin

Combinatorial batching of DNA for ultralow-cost detection of pathogenic variants

GENOME MEDICINE

IF11.2

2023-03-14

OAAI

Stoltze, Ulrik Kristoffer; Hagen, Christian Munch; van Overeem Hansen, Thomas; Byrjalsen, Anna; Gerdes, Anne-Marie; Yakimov, Victor; Rasmussen, Simon; Baekvad-Hansen, Marie; Hougaard, David Michael; Schmiegelow, Kjeld; Hjalgrim, Henrik; Wadt, Karin; Bybjerg-Grauholm, Jonas

研究方向