Štěpán Timr - Publications, H-index & Citations

Štěpán Timr

czech academy of sciences

16H指数

61论文数

1.3K被引数

收录论文 19

发表时间

Beyond contacts: The important role of the support region in protein complex assembly 超越接触: 支持区在蛋白质复合物装配中的重要作用

Protein Science

IF5.2

2026-01-20

OAAI

Tom Miclot; Stepan Timr

Cytoplasmic fluidity and the cold life: proteome stability is decoupled from viability in psychrophiles 细胞质流动性与冷适应生命：嗜冷菌的蛋白质组稳定性与其存活能力相分离

Nature Communications

IF15.7

2025-11-24

OAAI

Beatrice Caviglia; Stepan Timr; Marianne Guiral; Marie-Thérèse Giudici-Orticoni; Tilo Seydel; Christian Beck; Judith Peters; Fabio Sterpone; Alessandro Paciaroni

Multiscale Simulation of Phosphofructokinase-1 Assemblies: Capturing the Interplay between Specific and Transient Interactions

JOURNAL OF PHYSICAL CHEMISTRY B

IF2.9

2025-11-01

PREAI

Hazrati, Mehrnoosh Khodam; Miclot, Tom; Timr, Stepan

Can Macromolecular Crowding Help Regulate Glutamate Dehydrogenase Activity?大分子拥挤能否帮助调节谷氨酸脱氢酶活性？

ACS Omega

IF4.3

2025-10-30

OAAI

Genesis Rosario; Andrea Desrochers; Alec Robitaille; Emily Rundlett; Daniel Myšák; Zuzana Sochorová Vokáčová; Štěpán Timr; Eva Pluhařová; Kristin M. Slade

Purinosome Unmasked: Exploring the Molecular-Scale Structure of a Purinosome Complex In Silico Purinosome 解密：通过计算机模拟探索 Purinosome 复合物的分子级结构

physical chemistry letters

IF0

2025-08-05

PREAI

Florencia Klein; Stepan Timr; Simon Ebbinghaus; Fabio Sterpone

Structural basis for allosteric regulation of human phosphofructokinase-1

NATURE COMMUNICATIONS

IF15.7

2024-08-25

OAAI

Lynch, Eric M.; Hansen, Heather; Salay, Lauren; Cooper, Madison; Timr, Stepan; Kollman, Justin M.; Webb, Bradley A.

Evolution of large Aβ16-22 aggregates at atomic details and potential of mean force associated to peptide unbinding and fragmentation events

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

IF2.8

2023-05-03

PREAI

Iorio, Antonio; Timr, Stepan; Chiodo, Letizia; Derreumaux, Philippe; Sterpone, Fabio

Diffusive Dynamics of Bacterial Proteome as a Proxy of Cell Death

ACS CENTRAL SCIENCE

IF10.4

2023-01-09

OAAI

Di Bari, Daniele; Timr, Stepan; Guiral, Marianne; Giudici-Orticoni, Marie-There; Seydel, Tilo; Beck, Christian; Petrillo, Caterina; Derreumaux, Philippe; Melchionna, Simone; Sterpone, Fabio; Peters, Judith; Paciaroni, Alessandro

Sequestration of Proteins in Stress Granules Relies on the In-Cell but Not the In Vitro Folding Stability

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

IF15.6

2021-11-17

OAAI

Samanta, Nirnay; Ribeiro, Sara S.; Becker, Mailin; Laborie, Emeline; Pollak, Roland; Timr, Stepan; Sterpone, Fabio; Ebbinghaus, Simon

Quantitative linear dichroism imaging of molecular processes in living cells made simple by open software tools

COMMUNICATIONS BIOLOGY

IF5.1

2021-02-12

OAAI

Bondar, Alexey; Rybakova, Olga; Melcr, Josef; Dohnalek, Jan; Khoroshyy, Petro; Tichacek, Ondrej; Timr, Stepan; Miclea, Paul; Sakhi, Alina; Markova, Vendula; Lazar, Josef

Modelling lipid systems in fluid with Lattice Boltzmann Molecular Dynamics simulations and hydrodynamics

SCIENTIFIC REPORTS

IF3.9

2019-11-11

OAAI

Brandner, Astrid F.; Timr, Stepan; Melchionna, Simone; Derreumaux, Philippe; Baaden, Marc; Sterpone, Fabio

Stability Effect of Quinary Interactions Reversed by Single Point Mutations 单点突变逆转的五进相互作用的稳定性效应

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

IF15.6

2019-02-11

PREAI

Gnutt, David; Timr, Stepan; Ahlers, Jonas; Koenig, Benedikt; Manderfeld, Emily; Heyden, Matthias; Sterpone, Fabio; Ebbinghaus, Simon

Advancing Multi -Scale Simulation Methods for Biological Membrane Systems

BIOPHYSICAL JOURNAL

IF3.1

2019-02-01

OAAI

Brandner, Astrid F.; Timr, Stepan; Melchionna, Simone; Derreumaux, Philippe; Baaden, Marc; Sterpone, Fabio

Multi-Scale Simulations Yield Insight into Protein Diffusion and Stability in Crowded Environments

BIOPHYSICAL JOURNAL

IF3.1

2019-02-01

OAAI

Timr, Stepan; Melchionna, Simone; Derreumaux, Philippe; Sterpone, Fabio

Calcium ions in aqueous solutions: Accurate force field description aided by ab initio molecular dynamics and neutron scattering

JOURNAL OF CHEMICAL PHYSICS

IF3.1

2018-03-06

OAAI

Martinek, Tomas; Duboue-Dijon, Elise; Timr, Stepan; Mason, Philip E.; Baxova, Katarina; Fischer, Henry E.; Schmidt, Burkhard; Pluharova, Eva; Jungwirth, Pavel

Membrane Binding of Recoverin: From Mechanistic Understanding to Biological Functionality

ACS CENTRAL SCIENCE

IF10.4

2017-07-24

OAAI

Timr, Stepan; Pleskot, Roman; Kadlec, Jan; Kohagen, Miriam; Magarkar, Aniket; Jungwirth, Pavel

Transmembrane Potential Modeling: Comparison between Methods of Constant Electric Field and Ion Imbalance

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2016-04-05

PREAI

Melcr, Josef; Bonhenry, Daniel; Timr, Stepan; Jungwirth, Pavel