Huai‐Kuang Tsai - Publications, H-index & Citations

Huai‐Kuang Tsai

academia sinica - taiwan

20H指数

90论文数

1.3K被引数

收录论文 33

发表时间

A large language model framework for literature-based disease-gene association prediction 基于文献的疾病-基因关联预测的大型语言模型框架

BRIEFINGS IN BIOINFORMATICS

IF7.7

2025-02-25

OAAI

Li, Peng-Hsuan; Sun, Yih-Yun; Juan, Hsueh-Fen; Chen, Chien-Yu; Tsai, Huai-Kuang; Huang, Jia-Hsin

Predicting splicing patterns from the transcription factor binding sites in the promoter with deep learning 用深度学习预测启动子转录因子结合位点的剪接模式

BMC GENOMICS

IF3.7

2024-09-03

OAAI

Lin, Tzu-Chieh; Tsai, Cheng-Hung; Shiau, Cheng-Kai; Huang, Jia-Hsin; Tsai, Huai-Kuang

A feature extraction free approach for protein interactome inference from co-elution data

BRIEFINGS IN BIOINFORMATICS

IF7.7

2023-06-16

PREAI

Chen, Yu-Hsin; Chao, Kuan-Hao; Wong, Jin Yung; Liu, Chien-Fu; Leu, Jun-Yi; Tsai, Huai-Kuang

TRIPBASE: a database for identifying the human genomic DNA and lncRNA triplexes

genomics proteomics bioinformatics

IF2.8

2023-05-22

OAAI

Lin, Tzu-Chieh; Liu, Yen-Ling; Liu, Yu-Ting; Liu, Wan-Hsin; Liu, Zong-Yan; Chang, Kai-Li; Chang, Chin-Yao; Ni, Hung Chih; Huang, Jia-Hsin; Tsai, Huai-Kuang

Short human eccDNAs are predictable from sequences

BRIEFINGS IN BIOINFORMATICS

IF7.7

2023-04-21

PREAI

Chang, Kai-Li; Chen, Jia-Hong; Lin, Tzu-Chieh; Leu, Jun-Yi; Kao, Cheng-Fu; Wong, Jin Yung; Tsai, Huai-Kuang

pubmedKB: an interactive web server for exploring biomedical entity relations in the biomedical literature

NUCLEIC ACIDS RESEARCH

IF13.1

2022-05-10

OAAI

Li, Peng-Hsuan; Chen, Ting-Fu; Yu, Jheng-Ying; Shih, Shang-Hung; Su, Chan-Hung; Lin, Yin-Hung; Tsai, Huai-Kuang; Juan, Hsueh-Fen; Chen, Chien-Yu; Huang, Jia-Hsin

Genome-wide identification of associations between enhancer and alternative splicing in human and mouse 人类和小鼠中增强子和可变剪接之间关联的全基因组鉴定

BMC GENOMICS

IF3.7

2022-05-09

OAAI

Shiau, Cheng-Kai; Huang, Jia-Hsin; Liu, Yu-Ting; Tsai, Huai-Kuang

Identification and comparative analysis of long non-coding RNAs in the brain of fire ant queens in two different reproductive states

BMC GENOMICS

IF3.7

2022-04-13

OAAI

Tsai, Cheng-Hung; Lin, Tzu-Chieh; Chang, Yi-Hsien; Tsai, Huai-Kuang; Huang, Jia-Hsin

Transgenic refractory Aedes aegypti lines are resistant to multiple serotypes of dengue virus (vol 12, 754, 2022)

SCIENTIFIC REPORTS

IF3.9

2022-01-10

OAAI

Liu, Wei-Liang; Hsu, Chia-Wei; Chan, Shih-Peng; Yen, Pei-Shi; Su, Matthew P.; Li, Jian-Chiuan; Li, Hsing-Han; Cheng, Lie; Tang, Cheng-Kang; Ko, Shih-Hsun; Tsai, Huai-Kuang; Tsai, Zing Tsung-Yeh; Akbari, Omar S.; Failloux, Anna-Bella; Chen, Chun-Hong

Transgenic refractory Aedes aegypti lines are resistant to multiple serotypes of dengue virus

SCIENTIFIC REPORTS

IF3.9

2021-12-13

OAAI

NK cell receptor and ligand composition influences the clearance of SARS-CoV-2

JOURNAL OF CLINICAL INVESTIGATION

IF13.6

2021-11-01

OAAI

Hsieh, Wan-Chen; Lai, En-Yu; Liu, Yu-Ting; Wang, Yi-Fu; Tzeng, Yi-Shiuan; Cui, Lu; Lai, Yun-Ju; Huang, Hsiang-Chi; Huang, Jia-Hsin; Ni, Hung-Chih; Tsai, Dong-Yan; Liang, Jian-Jong; Liao, Chun-Che; Lu, Ya-Ting; Jiang, Laurence; Liu, Ming-Tsan; Wang, Jann-Tay; Chang, Sui-Yuan; Chen, Chung-Yu; Tsai, Hsing-Chen; Chang, Yao-Ming; Wernig, Gerlinde; Li, Chia-Wei; Lin, Kuo-, I; Lin, Yi-Ling; Tsai, Huai-Kuang; Huang, Yen-Tsung; Chen, Shih-Yu

Connecting MHC-I-binding motifs with HLA alleles via deep learning

COMMUNICATIONS BIOLOGY

IF5.1

2021-10-18

OAAI

Lee, Ko-Han; Chang, Yu-Chuan; Chen, Ting-Fu; Juan, Hsueh-Fen; Tsai, Huai-Kuang; Chen, Chien-Yu

iTARGEX analysis of yeast deletome reveals novel regulators of transcriptional buffering in S phase and protein turnover

NUCLEIC ACIDS RESEARCH

IF13.1

2021-07-01

OAAI

Huang, Jia-Hsin; Liao, You-Rou; Lin, Tzu-Chieh; Tsai, Cheng-Hung; Lai, Wei-Yun; Chou, Yang-Kai; Leu, Jun-Yi; Tsai, Huai-Kuang; Kao, Cheng-Fu

Targeting KDM4B that coactivates c-Myc-regulated metabolism to suppress tumor growth in castration- resistant prostate cancer

THERANOSTICS

IF13.3

2021-01-01

OAAI

Wu, Meng-Jen; Chen, Chih-Jung; Lin, Ting-Yu; Liu, Ying-Yuan; Tseng, Lin-Lu; Cheng, Mei-Ling; Chuu, Chih-Pin; Tsai, Huai-Kuang; Kuo, Wen-Ling; Kung, Hsing-Jien; Wang, Wen-Ching

Inferring the transcriptional regulatory mechanism of signal-dependent gene expression via an integrative computational approach

FEBS LETTERS

IF3

2020-02-29

OAAI

Chiang, Sufeng; Shinohara, Hisaaki; Huang, Jia-Hsin; Tsai, Huai-Kuang; Okada, Mariko

H3K4 methylation at active genes mitigates transcription-replication conflicts during replication stress

NATURE COMMUNICATIONS

IF15.7

2020-02-10

OAAI

Chong, Shin Yen; Cutler, Sam; Lin, Jing-Jer; Tsai, Cheng-Hung; Tsai, Huai-Kuang; Biggins, Sue; Tsukiyama, Toshio; Lo, Yi-Chen; Kao, Cheng-Fu