Ruheng Wang - Publications, H-index & Citations

Ruheng Wang

University of Texas Southwestern Medical Center

13H指数

59论文数

911被引数

收录论文 18

发表时间

Deciphering T-cell receptor–antigen recognition through interpretable residue-level interaction modeling 通过可解释的残基级相互作用建模解析T细胞受体-抗原识别

International Journal of Biological Macromolecules

IF8.5

2026-09-09

PREAI

Wenyu Xi; Ruheng Wang; Xiucai Ye; Lei Xu

An Integrated and Robust Deep Learning Framework for Denoising and Analyzing Single-Cell Spatial Transcriptomics 用于去噪和分析单细胞空间转录组学的集成且强大的深度学习框架

Advanced Intelligent Systems

IF6.1

2026-05-21

OAAI

Yaxuan Cui; Yang Cui; Ruheng Wang; Xin Zeng; Zheyong Zhu; Ding Yi; Ruihua Guo; Tetsuya Sakurai; Kenta Nakai; Xiucai Ye; Leyi Wei; Yong Chen

DiffuScope: A diffusion-regularized autoencoder for spatial transcriptomic clustering DiffuScope：一种用于空间转录组聚类的扩散正则化自编码器

Computational Biology and Chemistry

IF3.1

2025-10-24

PREAI

Hua Shi; Ding Yi; Yang Cui; Ruheng Wang; Yan Li; Chunyan Ao; Ruihua Guo; Weihang Zhang; Tao Peng; Yuying Le; Yaxuan Cui; Leyi Wei

An interpretable deep learning model predicts RNA-small molecule binding sites 一种可解释的深度学习模型预测RNA-小分子结合位点

FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE

IF6.1

2024-10-01

PREAI

Xi, Wenyu; Wang, Ruheng; Wang, Li; Ye, Xiucai; Liu, Mingyang; Sakurai, Tetsuya

MucLiPred: Multi-Level Contrastive Learning for Predicting Nucleic Acid Binding Residues of Proteins

JOURNAL OF CHEMICAL INFORMATION AND MODELING

IF5.3

2024-02-01

PREAI

Zhang, Jiashuo; Wang, Ruheng; Wei, Leyi

Multiview Deep Learning-Based Molecule Design and Structural Optimization Accelerates Inhibitor Discover

IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS

IF8.9

2024-01-01

PREAI

Pang, Chao; Wang, Yu; Jiang, Yi; Wang, Ruheng; Yao, Xiaojun; Zou, Quan; Zeng, Xiangxiang; Su, Ran; Wei, Leyi

Multi-CGAN: Deep Generative Model-Based Multiproperty Antimicrobial Peptide Design

JOURNAL OF CHEMICAL INFORMATION AND MODELING

IF5.3

2023-12-22

PREAI

Yu, Haoqing; Wang, Ruheng; Qiao, Jianbo; Wei, Leyi

ConPep: Prediction of peptide contact maps with pre-trained biological language model and multi-view feature extracting strategy ConPep: 基于预训练生物语言模型和多视图特征提取策略的肽接触图预测

COMPUTERS IN BIOLOGY AND MEDICINE

IF6.3

2023-12-01

PREAI

Wei, Qingxin; Wang, Ruheng; Jiang, Yi; Wei, Leyi; Sun, Yu; Geng, Jie; Su, Ran

AttenSyn: An Attention-Based Deep Graph Neural Network for Anticancer Synergistic Drug Combination Prediction

JOURNAL OF CHEMICAL INFORMATION AND MODELING

IF5.3

2023-08-11

PREAI

Wang, Tianshuo; Wang, Ruheng; Wei, Leyi

MVIL6: Accurate identification of IL-6-induced peptides using multi-view feature learning MVIL6: 使用多视图特征学习准确识别IL-6-induced肽

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

IF8.5

2023-08-01

PREAI

Wang, Ruheng; Feng, Yangfan; Sun, Meili; Jiang, Yi; Li, Zhongshen; Cui, Lizhen; Wei, Leyi

CACPP: A Contrastive Learning-Based Siamese Network to Identify Anticancer Peptides Based on Sequence Only

JOURNAL OF CHEMICAL INFORMATION AND MODELING

IF5.3

2023-05-30

PREAI

Yang, Xuetong; Jin, Junru; Wang, Ruheng; Li, Zhongshen; Wang, Yu; Wei, Leyi

DeepBIO: an automated and interpretable deep-learning platform for high-throughput biological sequence prediction, functional annotation and visualization analysis DeepBIO: 一个自动化和可解释的深度学习平台，用于高通量生物序列预测，功能注释和可视化分析

NUCLEIC ACIDS RESEARCH

IF13.1

2023-02-17

OAAI

Wang, Ruheng; Jiang, Yi; Jin, Junru; Yin, Chenglin; Yu, Haoqing; Wang, Fengsheng; Feng, Jiuxin; Su, Ran; Nakai, Kenta; Zou, Quan; Wei, Leyi

Explainable Deep Hypergraph Learning Modeling the Peptide Secondary Structure Prediction 可解释的深度超图学习建模肽二级结构预测

ADVANCED SCIENCE

IF14.1

2023-02-15

OAAI

Jiang, Yi; Wang, Ruheng; Feng, Jiuxin; Jin, Junru; Liang, Sirui; Li, Zhongshen; Yu, Yingying; Ma, Anjun; Su, Ran; Zou, Quan; Ma, Qin; Wei, Leyi

iDNA-ABF: multi-scale deep biological language learning model for the interpretable prediction of DNA methylations Idna-abf: 用于DNA甲基化可解释预测的多尺度深度生物语言学习模型

GENOME BIOLOGY

IF9.4

2022-10-17

OAAI

Jin, Junru; Yu, Yingying; Wang, Ruheng; Zeng, Xin; Pang, Chao; Jiang, Yi; Li, Zhongshen; Dai, Yutong; Su, Ran; Zou, Quan; Nakai, Kenta; Wei, Leyi

Mechanical properties of Q345 structural steel after artificial cooling from elevated temperatures

JOURNAL OF CONSTRUCTIONAL STEEL RESEARCH

IF4.3

2021-01-01

PREAI

Zhang, Chuntao; Wang, Ruheng; Zhu, Li

Post-fire mechanical properties of Q460 and Q690 high strength steels after fire-fighting foam cooling

THIN-WALLED STRUCTURES

IF6.6

2020-11-01

PREAI

Zhang, Chuntao; Wang, Ruheng; Song, Gangbing

Effects of pre-fatigue damage on mechanical properties of Q690 high-strength steel

CONSTRUCTION AND BUILDING MATERIALS

IF8

2020-08-01

PREAI

Zhang, Chuntao; Wang, Ruheng; Song, Gangbing

EDNTOM: An Ensemble Learning and Weight Mechanism-Based Nanopore Methylation Detection Tool EDNTOM：基于集成学习和权重机制的纳米孔甲基化检测工具

ACS Omega

IF4.3

OAAI

Ge Tian; Chenglin Yin; Jianbo Qiao; Ruheng Wang; Hua Shi; Feifei Cui; Zilong Zhang; Xinbo Jiang; Leyi Wei

研究方向