Richard Lavery - Publications, H-index & Citations

Richard Lavery

Universite Claude Bernard Lyon 1

59H指数

371论文数

1.5W被引数

收录论文 68

发表时间

The static and dynamic structural heterogeneities of B-DNA: extending Calladine-Dickerson rules

NUCLEIC ACIDS RESEARCH

IF13.1

2019-10-18

OAAI

Dans, Pablo D.; Balaceanu, Alexandra; Pasi, Marco; Patellis, Alessandro S.; Petkeviciute, Daiva; Walther, Jurgen; Hospital, Adam; Bayarri, Genis; Lavery, Richard; Maddocks, John H.; Orozco, Modesto

Sequence-dependent response of DNA to torsional stress: a potential biological regulation mechanism

NUCLEIC ACIDS RESEARCH

IF13.1

2017-12-18

OAAI

Reymer, Anna; Zakrzewska, Krystyna; Lavery, Richard

Decomposing protein-DNA binding and recognition using simplified protein models

NUCLEIC ACIDS RESEARCH

IF13.1

2017-07-18

OAAI

Etheve, Loic; Martin, Juliette; Lavery, Richard

Structure and Dynamics of a 197 bp Nucleosome in Complex with Linker Histone H1 (vol 66, pg 384, 2017)

MOLECULAR CELL

IF16.6

2017-06-01

OAAI

Bednar, Jan; Garcia-Saez, Isabel; Boopathi, Ramachandran; Cutter, Amber R.; Papai, Gabor; Reymer, Anna; Syed, Sajad H.; Lone, Imtiaz Nisar; Tonchev, Ognyan; Crucifix, Corinne; Menoni, Herve; Papin, Christophe; Skoufias, Dimitrios A.; Kurumizaka, Hitoshi; Lavery, Richard; Hamiche, Ali; Hayes, Jeffrey J.; Schultz, Patrick; Angelov, Dimitar; Petosa, Carlo; Dimitrov, Stefan

Structure and Dynamics of a 197 bp Nucleosome in Complex with Linker Histone H1

MOLECULAR CELL

IF16.6

2017-05-01

214

OAAI

Analyzing DNA curvature and its impact on the ionic environment: application to molecular dynamics simulations of minicircles

NUCLEIC ACIDS RESEARCH

IF13.1

2017-02-09

OAAI

Pasi, Marco; Zakrzewska, Krystyna; Maddocks, John H.; Lavery, Richard

Protein-DNA interfaces: a molecular dynamics analysis of time-dependent recognition processes for three transcription factors

NUCLEIC ACIDS RESEARCH

IF13.1

2016-09-21

OAAI

Etheve, Loic; Martin, Juliette; Lavery, Richard

DNA minicircles clarify the specific role of DNA structure on retroviral integration

NUCLEIC ACIDS RESEARCH

IF13.1

2016-07-20

OAAI

Pasi, Marco; Mornico, Damien; Volant, Stevenn; Juchet, Anna; Batisse, Julien; Bouchier, Christiane; Parissi, Vincent; Ruff, Marc; Lavery, Richard; Lavigne, Marc

Structure and dynamics of DNA loops on nucleosomes studied with atomistic, microsecond-scale molecular dynamics

NUCLEIC ACIDS RESEARCH

IF13.1

2016-04-20

OAAI

Pasi, Marco; Lavery, Richard

Long-timescale dynamics of the Drew-Dickerson dodecamer

NUCLEIC ACIDS RESEARCH

IF13.1

2016-04-15

OAAI

Dans, Pablo D.; Danilane, Linda; Ivani, Ivan; Drasata, Tomas; Lankas, Filip; Hospital, Adam; Walther, Juergen; Illa Pujagut, Ricard; Battistini, Federica; Lluis Gelpi, Josep; Lavery, Richard; Orozco, Modesto

Dynamics and recognition within a protein-DNA complex: a molecular dynamics study of the SKN-1/DNA interaction

NUCLEIC ACIDS RESEARCH

IF13.1

2015-12-31

OAAI

Etheve, Loic; Martin, Juliette; Lavery, Richard

Improving the treatment of coarse-grain electrostatics: CVCEL

JOURNAL OF CHEMICAL PHYSICS

IF3.1

2015-10-23

PREAI

Ceres, N.; Lavery, R.

Internal Normal Mode Analysis (iNMA) Applied to Protein Conformational Flexibility

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2015-10-16

PREAI

Frezza, Elisa; Lavery, Richard

Analyzing ion distributions around DNA: sequence-dependence of potassium ion distributions from microsecond molecular dynamics

NUCLEIC ACIDS RESEARCH

IF13.1

2015-02-06

OAAI

Pasi, Marco; Maddocks, John H.; Lavery, Richard

μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA

NUCLEIC ACIDS RESEARCH

IF13.1

2014-09-26

170

OAAI

Pasi, Marco; Maddocks, John H.; Beveridge, David; Bishop, Thomas C.; Case, David A.; Cheatham, Thomas, III; Dans, Pablo D.; Jayaram, B.; Lankas, Filip; Laughton, Charles; Mitchell, Jonathan; Osman, Roman; Orozco, Modesto; Perez, Alberto; Petkeviciute, Daiva; Spackova, Nada; Sponer, Jiri; Zakrzewska, Krystyna; Lavery, Richard

Unraveling the sequence-dependent polymorphic behavior of d(CpG) steps in B-DNA

NUCLEIC ACIDS RESEARCH

IF13.1

2014-09-15

OAAI

Dans, Pablo Daniel; Faustino, Ignacio; Battistini, Federica; Zakrzewska, Krystyna; Lavery, Richard; Orozco, Modesto

Analyzing ion distributions around DNA

NUCLEIC ACIDS RESEARCH

IF13.1

2014-06-07

OAAI

Lavery, Richard; Maddocks, John H.; Pasi, Marco; Zakrzewska, Krystyna