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Sandra Smit

Wageningen University & Research

26H指数
96论文数
5.9K被引数
收录论文 30
发表时间
MoGAAAP: a modular Snakemake workflow for automated genome assembly and annotation with quality assessmentMoGAAAP:一个模块化的Snakemake工作流,用于带质量评估的基因组组装和注释自动化
err2026-03-01
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PREAI
errVan workum, Dirk-Jan M.; Dey, Kuntal K.; Kozik, Alexander; Lavelle, Dean O.; de ridder, Dick; Schranz, M. Eric; Michelmore, Richard W.; Smit, Sandra
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Three Novel Genomes Broaden the Wild Side of the Capsicum Pangenome三种新型基因组拓展了辣椒泛基因组的野生维度
err2025-12-07
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errPapastolopoulou, Christina; Nieuwenhuis, Ronald; Warris, Sven; Bakker, Linda V.; van Haarst, Jan; Cordewener, Jan; Hesselink, Thamara; van den Broeck, Hetty; van Dooijeweert, Willem; de Jong, Hans; Chunwongse, Julapark; Trivino, Sara Diaz; Schijlen, Elio; de Ridder, Dick; Smit, Sandra; Peters, Sander A.
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Multipla: Multiscale Pangenomic Locus AnalysisMultipla: 多尺度泛基因组位点分析
err2025-05-23
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errOAAI
errA. van den Brandt; E. Ståhlbom; F.J.M. van Workum; H. van de Wetering; C. Lundström; S. Smit; A. Vilanova
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Lactuca super-pangenome reduces bias towards reference genes in lettuce researchLactuca超级pangenome减少了生菜研究中对参考基因的偏见
err2024-10-28
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errOAAI
errvan Workum, Dirk-Jan M.; Mehrem, Sarah L.; Snoek, Basten L.; Alderkamp, Marrit C.; Lapin, Dmitry; Mulder, Flip F. M.; Van den Ackerveken, Guido; de Ridder, Dick; Schranz, M. Eric; Smit, Sandra
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Allelic variants confer Arabidopsis adaptation to small regional environmental differences
err2024-10-14
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errOAAI
errWijfjes, Raul Y.; Boesten, Rene; Becker, Frank F. M.; Theeuwen, Tom P. J. M.; Snoek, Basten L.; Mastoraki, Maria; Verheijen, Jelle J.; Guvencli, Nuri; Denkers, Lissy-Anne M.; Koornneef, Maarten; van Eeuwijk, Fred A.; Smit, Sandra; de de Ridder, Dick; Aarts, Mark G. M.
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Adaptation of Fusarium Head Blight Pathogens to Changes in Agricultural Practices and Human Migration镰刀菌枯萎病病原体适应农业实践和人类迁移的变化
err2024-08-05
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errOAAI
errYang, Meixin; Smit, Sandra; de Ridder, Dick; Feng, Jie; Liu, Taiguo; Xu, Jinrong; van der Lee, Theo A. J.; Zhang, Hao; Chen, Wanquan
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An Efficient Triplex TaqMan Quantitative PCR to Detect a Blackleg-Causing Lineage of Pectobacterium brasiliense in Potato Based on a Pangenome Analysis
err2023-08-13
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errOAAI
errVan der Lee, Theo A. J.; Van Gent-Pelzer, Marga P. E.; Jonkheer, Eef M.; Brankovics, Balazs; Houwers, Ilse M.; Van der Wolf, Jan M.; Bonants, Peter J. M.; Van Duivenbode, Inge; Vreeburg, Robert A. M.; Nas, Mathijs; Smit, Sandra
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The genome sequence of Hirschfeldia incana, a new Brassicaceae model to improve photosynthetic light-use efficiencyHirschfeldia indana的基因组序列,这是一种新的十字花科模型,可提高光合作用的光利用效率
err2022-11-07
err9
errOAAI
errGarassino, Francesco; Wijfjes, Raul Y.; Boesten, Rene; Marquez, Francisca Reyes; Becker, Frank F. M.; Clapero, Vittoria; van den Hatert, Iris; Holmer, Rens; Schranz, M. Eric; Harbinson, Jeremy; de Ridder, Dick; Smit, Sandra; Aarts, Mark G. M.
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The Pectobacterium pangenome, with a focus on Pectobacterium brasiliense, shows a robust core and extensive exchange of genes from a shared gene pool
err2021-04-14
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errOAAI
errJonkheer, Eef M.; Brankovics, Balazs; Houwers, Ilse M.; van der Wolf, Jan M.; Bonants, Peter J. M.; Vreeburg, Robert A. M.; Bollema, Robert; de Haan, Jorn R.; Berke, Lidija; Smit, Sandra; de Ridder, Dick; van der Lee, Theo A. J.
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The development of a novel diagnostic PCR for Madurella mycetomatis using a comparative genome approach
err2020-12-16
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errLim, Wilson; Siddig, Emmanuel; Eadie, Kimberly; Nyuykonge, Bertrand; Ahmed, Sarah; Fahal, Ahmed; Verbon, Annelies; Smit, Sandra; van de Sande, Wendy W. J.
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Comparative genomics of the nonlegume Parasponia reveals insights into evolution of nitrogen-fixing rhizobium symbioses
err2018-05-01
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errvan Velzen, Robin; Holmer, Rens; Bu, Fengjiao; Rutten, Luuk; van Zeijl, Arjan; Liu, Wei; Santuari, Luca; Cao, Qingqin; Sharma, Trupti; Shen, Defeng; Roswanjaya, Yuda; Wardhani, Titis A. K.; Kalhor, Maryam Seifi; Jansen, Joelle; van den Hoogen, Johan; Gungor, Berivan; Hartog, Marijke; Hontelez, Jan; Verver, Jan; Yang, Wei-Cai; Schijlen, Elio; Repin, Rimi; Schilthuizen, Menno; Schranz, M. Eric; Heidstra, Renze; Miyata, Kana; Fedorova, Elena; Kohlen, Wouter; Bisseling, Ton; Smit, Sandra; Geurts, Rene
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Coping with living in the soil: the genome of the parthenogenetic springtail Folsomia candida
err2017-06-28
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errFaddeeva-Vakhrusheva, Anna; Kraaijeveld, Ken; Derks, Martijn F. L.; Anvar, Seyed Yahya; Agamennone, Valeria; Suring, Wouter; Kampfraath, Andries A.; Ellers, Jacintha; Le Ngoc, Giang; van Gestel, Cornelis A. M.; Marien, Janine; Smit, Sandra; van Straalen, Nico M.; Roelofs, Dick
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Enhancing faba bean (Vicia faba L.) genome resources
err2017-04-17
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errCooper, James W.; Wilson, Michael H.; Derks, Martijn F. L.; Smit, Sandra; Kunert, Karl J.; Cullis, Christopher; Foyer, Christine H.
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Comparative genomics of Beauveria bassiana: uncovering signatures of virulence against mosquitoes
err2016-12-01
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errValero-Jimenez, Claudio A.; Faino, Luigi; Veld, Daphne Spring in't; Smit, Sandra; Zwaan, Bas J.; van Kan, Jan A. L.
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Computational pan-genomics: status, promises and challenges
err2016-10-21
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errMarschall, Tobias; Marz, Manja; Abeel, Thomas; Dijkstra, Louis; Dutilh, Bas E.; Ghaffaari, Ali; Kersey, Paul; Kloosterman, Wigard P.; Makinen, Veli; Novak, Adam M.; Paten, Benedict; Porubsky, David; Rivals, Eric; Alkan, Can; Baaijens, Jasmijn A.; De Bakker, Paul I. W.; Boeva, Valentina; Bonnal, Raoul J. P.; Chiaromonte, Francesca; Chikhi, Rayan; Ciccarelli, Francesca D.; Cijvat, Robin; Datema, Erwin; Van Duijn, Cornelia M.; Eichler, Evan E.; Ernst, Corinna; Eskin, Eleazar; Garrison, Erik; El-Kebir, Mohammed; Klau, Gunnar W.; Korbel, Jan O.; Lameijer, Eric-Wubbo; Langmead, Benjamin; Martin, Marcel; Medvedev, Paul; Mu, John C.; Neerincx, Pieter; Ouwens, Klaasjan; Peterlongo, Pierre; Pisanti, Nadia; Rahmann, Sven; Raphael, Ben; Reinert, Knut; de Ridder, Dick; de Ridder, Jeroen; Schlesner, Matthias; Schulz-Trieglaff, Ole; Sanders, Ashley D.; Sheikhizadeh, Siavash; Shneider, Carl; Smit, Sandra; Valenzuela, Daniel; Wang, Jiayin; Wessels, Lodewyk; Zhang, Ying; Guryev, Victor; Vandin, Fabio; Ye, Kai; Schonhuth, Alexander
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Risk factors for tuberculosis smear non-conversion in Eden district, Western Cape, South Africa, 2007-2013: a retrospective cohort study
err2016-08-02
err25
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errMlotshwa, Mandla; Abraham, Natasha; Beery, Moira; Williams, Seymour; Smit, Sandra; Uys, Margot; Reddy, Carl; Medina-Marino, Andrew
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Gene Family Evolution Reflects Adaptation to Soil Environmental Stressors in the Genome of the Collembolan Orchesella cincta
err2016-06-11
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errFaddeeva-Vakhrusheva, Anna; Derks, Martijn F. L.; Anvar, Seyed Yahya; Agamennone, Valeria; Suring, Wouter; Smit, Sandra; van Straalen, Nico M.; Roelofs, Dick
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NCBI-compliant genome submissions: tips and tricks to save time and money
err2015-12-10
err6
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errPirovano, Walter; Boetzer, Marten; Derks, Martijn F. L.; Smit, Sandra
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The Genome of Winter Moth (Operophtera brumata) Provides a Genomic Perspective on Sexual Dimorphism and Phenology
err2015-07-29
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errDerks, Martijn F. L.; Smit, Sandra; Salis, Lucia; Schijlen, Elio; Bossers, Alex; Mateman, Christa; Pijl, Agata S.; de Ridder, Dick; Groenen, Martien A. M.; Visser, Marcel E.; Megens, Hendrik-Jan
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