Alper Uzun - Publications, H-index & Citations

Alper Uzun

brown university

18H指数

88论文数

910被引数

收录论文 23

发表时间

VarStack2—an interactive web tool for somatic variant interpretation in cancer VarStack2——癌症体细胞变异解读的交互式网络工具

Database

IF0

2026-04-11

OAAI

Nitin Sreekumar; Benjamin J Ahn; Shulan Tian; Alper Uzun; Ece D Gamsiz Uzun

Hypomorphic Protein Expression of DNA Polymerase Beta in PolβL301R-V303R/L301R-V303R Knock-In Transgenic Mice Does Not Impact Global DNA Methylation Levels in the Midbrain 在PolβL301R-V303R/L301R-V303R基因敲入转基因小鼠中，DNA聚合酶β的低活性蛋白表达不会影响中脑的全局DNA甲基化水平。

Biomolecules

IF4.8

2026-03-11

OAAI

Bryce Jacobs; Dan Ivanov; Ivana Barraza; Christopher Faulk; Carmen J. Booth; Raquel Mattos-Canedo; Lucas Tian; Kaitlyn DePietro; Alper Uzun; Robert W. Sobol

THRESHOLD: a comprehensive transcriptomic analysis tool for evaluating gene saturation and impact in disease progression 阈值：一个用于评估基因饱和度和疾病进展影响的全面转录组分析工具

NAR CANCER

IF3.2

2025-12-01

OAAI

Gammell, Finan; Li, Jennifer; Elco, Christopher; Plavicki, Jessica; Uzun, Alper

Uncovering Cutaneous Melanoma Prognostic Subgroups via Protein-Protein Interaction Networks: New Insights into Survival Risk Analysis and Therapeutic Targets

LABORATORY INVESTIGATION

IF4.2

2025-03-01

PREAI

Omer, Mohamed; Li, Jennifer; Uzun, Alper; Uzun, Ece

The Atlas of Protein-Protein Interactions in Cancer (APPIC)-a webtool to visualize and analyze cancer subtypes

NAR CANCER

IF3.2

2025-01-15

OAAI

Ahn, Benjamin; Chou, Charissa; Chou, Caden; Chen, Jennifer; Zug, Amelia; Baykara, Yigit; Claus, Jessica; Hacking, Sean M.; Uzun, Alper; Uzun, Ece D. Gamsiz

Tumor treating fields induce the integrated stress response, alter the transcriptional signatures of cellular metabolism, and modulate immune-related cytokines dependent and independent of p53

CANCER RESEARCH

IF16.6

2024-03-22

PREAI

Srinivasan, Praveen R.; George, Andrew; Chou, Charissa; Pinho-Schwermann, Maximilian; Ghandali, Maryam; Tajiknia, Vida; Porat, Yaara; Giladi, Moshe; Armstead, Andrea; Uzun, Alper; Wong, Eric T.; El-Deiry, Wafik S.

Protein interaction networks define the genetic architecture of preterm birth

SCIENTIFIC REPORTS

IF3.9

2022-01-10

OAAI

Uzun, Alper; Schuster, Jessica S.; Stabila, Joan; Zarate, Valeria; Tollefson, George A.; Agudelo, Anthony; Kothiyal, Prachi; Wong, Wendy S. W.; Padbury, James

Transcription Profiles Associated with Inducible Adhesion in Candida parapsilosis

MSPHERE

IF3.1

2021-02-24

OAAI

Bliss, Joseph M.; Tollefson, George A.; Cuevas, Abigail; Longley, Sarah J.; Neale, Matthew N.; Uzun, Alper; Shaw, Sunil K.

Proteinarium: Multi-sample protein-protein interaction analysis and visualization tool

GENOMICS

IF3

2020-11-01

OAAI

Armanious, David; Schuster, Jessica; Tollefson, George A.; Agudelo, Anthony; DeWan, Andrew T.; Istrail, Sorin; Padbury, James; Uzun, Alper

Machine learning approach to literature mining for the genetics of complex diseases

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION

IF3.6

2019-11-26

OAAI

Schuster, Jessica; Superdock, Michael; Agudelo, Anthony; Stey, Paul; Padbury, James; Sarkar, Indra Neil; Uzun, Alper

VIVA (VIsualization of VAriants): A VCF File Visualization Tool

SCIENTIFIC REPORTS

IF3.9

2019-09-02

OAAI

Tollefson, G. A.; Schuster, J.; Gelin, F.; Agudelo, A.; Ragavendran, A.; Restrepo, I; Stey, P.; Padbury, J.; Uzun, A.

Medical morbidities and DNA methylation of NR3C1 in preterm infants

PEDIATRIC RESEARCH

IF3.1

2016-09-21

OAAI

Giarraputo, James; DeLoach, Jordan; Padbury, James; Uzun, Alper; Marsit, Carmen; Hawes, Katheleen; Lester, Barry

Structural and genomic variation in preterm birth

PEDIATRIC RESEARCH

IF3.1

2016-07-24

OAAI

Uzun, Alper; Sahin, Yavuz; Schuster, Jessica S.; Zheng, Xiaojing; Ryckman, Kelli; Feingold, Eleanor; Padbury, James

dbPEC: a comprehensive literature-based database for preeclampsia related genes and phenotypes

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION

IF3.6

2016-03-05

OAAI

Uzun, Alper; Triche, ElizabethW.; Schuster, Jessica; Dewan, Andrew T.; Padbury, James F.

Bioinformatic Approach to the Genetics of Preeclampsia

OBSTETRICS AND GYNECOLOGY

IF4.7

2014-06-01

OAAI

Triche, Elizabeth W.; Uzun, Alper; DeWan, Andrew T.; Kurihara, Itsuka; Liu, Joy; Occhiogrosso, Rachel; Shen, Burton; Parker, Jeremy; Padbury, James F.

Travel of the Shot

ANNALS OF THORACIC SURGERY

IF3.9

2013-05-01

OAAI

Ecevit, Ata; Altintas, Garip; Cicek, Omer Faruk; Uzun, Alper; Kadirogullari, Ersin; Bardakci, Hasmet

Pathway-based genetic analysis of preterm birth

GENOMICS

IF3

2013-03-01

OAAI

Uzun, Alper; Dewan, Andrew T.; Istrail, Sorin; Padbury, James F.

Dynamics of microRNAs in bull spermatozoa

REPRODUCTIVE BIOLOGY AND ENDOCRINOLOGY

IF4.7

2012-09-14

OAAI

Govindaraju, Aruna; Uzun, Alper; Robertson, LaShonda; Atli, Mehmet O.; Kaya, Abdullah; Topper, Einko; Crate, Elizabeth A.; Padbury, James; Perkins, Andy; Memili, Erdogan

dbPTB: a database for preterm birth

DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION

IF3.6

2012-02-08

OAAI

Uzun, Alper; Laliberte, Alyse; Parker, Jeremy; Andrew, Caroline; Winterrowd, Emily; Sharma, Surendra; Istrail, Sorin; Padbury, James F.

Functional genomics of HMGN3a and SMARCAL1 in early mammalian embryogenesis

BMC GENOMICS

IF3.7

2009-04-24

OAAI

Uzun, Alper; Rodriguez-Osorio, Nelida; Kaya, Abdullah; Wang, Hongfeng; Parrish, John J.; Ilyin, Valentin A.; Memili, Erdogan

研究方向