Tomáš Flouri - Publications, H-index & Citations

Tomáš Flouri

gower street

30H指数

135论文数

2.9W被引数

收录论文 32

发表时间

Species-dense genomics through natural history collections 通过自然历史馆藏实现物种密集型基因组学

Nature Reviews Genetics

IF52

2026-09-02

PREAI

Paschalia Kapli; Hugh Carter; Hayley B. Free; Adam D. Leaché; Hugo J. de Boer; Tomáš Flouri; Ben Price; Gavin R. Broad; Matthew D. Clark; Mozes P. K. Blom; Karen Meusemann; Bernhard Misof; Rebecca N. Johnson; Sandra Knapp; D. Tim J. Littlewood

Scaling up Bayesian population phylogenomics through virtual dimension reduction 通过虚拟维度缩减扩大贝叶斯种群谱系基因组学规模

Nature Communications

IF15.7

2026-04-08

OAAI

Tomáš Flouri; Xiyun Jiao; Jun Huang; Bruce Rannala; Ziheng Yang

The Impact of Sequencing and Genotyping Errors on Bayesian Analysis of Genomic Data under the Multispecies Coalescent Model 测序和基因分型错误对多物种共祖模型下基因组数据贝叶斯分析的影响

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2025-08-01

PREAI

Ji, Jiayi; Kapli, Paschalia; Flouri, Tomas; Yang, Ziheng

Inference of Gene Flow between Species from Genomic Data When the Mode, Direction, and Lineages are Misspecified 基于基因组数据推断物种间基因流，当模式、方向和世系存在误指时

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2025-06-01

OAAI

Thawornwattana, Yuttapong; Flouri, Tomas; Mallet, James; Yang, Ziheng

Inference of Cross-Species Gene Flow Using Genomic Data Depends on the Methods: Case Study of Gene Flow in Drosophila 利用基因组数据推断种间基因流的方法依赖性：果蝇基因流案例研究

SYSTEMATIC BIOLOGY

IF5.7

2025-05-27

OAAI

Ji, Jiayi; Roberts, Thomas; Flouri, Tomas; Yang, Ziheng

Massive Inter-species Introgression Overwhelms Phylogenomic Relationships Among Jaguar, Lion, and Leopard 大规模种间渐渗掩盖了美洲豹、狮子和豹的系统基因组学关系

SYSTEMATIC BIOLOGY

IF5.7

2025-03-25

PREAI

Santos, Sarah H. D.; Figueiro, Henrique, V; Flouri, Tomas; Ramalho, Emiliano; Cullen Jr, Laury; Murphy, William J.

Hierarchical Heuristic Species Delimitation Under the Multispecies Coalescent Model with Migration

SYSTEMATIC BIOLOGY

IF5.7

2024-08-24

OAAI

Kornai, Daniel; Jiao, Xiyun; Ji, Jiayi; Flouri, Tomas; Yang, Ziheng

Bayesian Inference Under the Multispecies Coalescent with Ancient DNA Sequences

SYSTEMATIC BIOLOGY

IF5.7

2024-07-30

OAAI

Nagel, Anna A.; Flouri, Tomas; Yang, Ziheng; Rannala, Bruce

Gene Flow and Isolation in the Arid Nearctic Revealed by Genomic Analyses of Desert Spiny Lizards

SYSTEMATIC BIOLOGY

IF5.7

2024-01-08

PREAI

Pavon-Vazquez, Carlos J.; Rana, Qaantah; Farleigh, Keaka; Crispo, Erika; Zeng, Mimi; Liliah, Jeevanie; Mulcahy, Daniel; Ascanio, Alfredo; Jezkova, Tereza; Leache, Adam D.; Flouri, Tomas; Yang, Ziheng; Blair, Christopher

Efficient Bayesian inference under the multispecies coalescent with migration

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IF9.1

2023-10-23

OAAI

Flouri, Tomas; Jiao, Xiyun; Huang, Jun; Rannala, Bruce; Yang, Ziheng

Inferring the Direction of Introgression Using Genomic Sequence Data

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2023-08-08

OAAI

Thawornwattana, Yuttapong; Huang, Jun; Flouri, Tomas; Mallet, James; Yang, Ziheng

Estimation of species divergence times in presence of cross-species gene flow

SYSTEMATIC BIOLOGY

IF5.7

2023-03-24

OAAI

Tiley, George P.; Flouri, Tomas; Jiao, Xiyun; Poelstra, Jelmer W.; Xu, Bo; Zhu, Tianqi; Rannala, Bruce; Yoder, Anne D.; Yang, Ziheng

A near-complete species-level phylogeny of uropeltid snakes harnessing historical museum collections as a DNA source

MOLECULAR PHYLOGENETICS AND EVOLUTION

IF3.6

2023-01-01

OAAI

Sampaio, Filipa L.; Day, Julia J.; Wickramasinghe, L. J. Mendis; Cyriac, Vivek P.; Papadopoulou, Anna; Brace, Selina; Rajendran, Albert; Simon-Nutbrown, Cornelia; Flouris, Tomas; Kapli, Paschalia; Vidanapathirana, Dulan Ranga; Kotharambath, Ramachandran; Kodandaramaiah, Ullasa; Gower, David J.

Inference of Gene Flow between Species under Misspecified Models

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2022-11-01

OAAI

Huang, Jun; Thawornwattana, Yuttapong; Flouri, Tomas; Mallet, James; Yang, Ziheng

Bayesian Phylogenetic Inference using Relaxed-clocks and the Multispecies Coalescent 使用松弛时钟和多物种合并的贝叶斯系统发育推断

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2022-07-30

OAAI

Flouri, Tomas; Huang, Jun; Jiao, Xiyun; Kapli, Paschalia; Rannala, Bruce; Yang, Ziheng

Estimation of Cross-Species Introgression Rates Using Genomic Data Despite Model Unidentifiability

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2022-04-13

OAAI

Yang, Ziheng; Flouri, Tomas

Genome-Scale Data Reveal Deep Lineage Divergence and a Complex Demographic History in the Texas Horned Lizard (Phrynosoma cornutum) throughout the Southwestern and Central United States

GENOME BIOLOGY AND EVOLUTION

IF2.8

2021-11-26

OAAI

Finger, Nicholas; Farleigh, Keaka; Bracken, Jason T.; Leache, Adam D.; Francois, Olivier; Yang, Ziheng; Flouri, Tomas; Charran, Tristan; Jezkova, Tereza; Williams, Dean A.; Blair, Christopher

SPART: A versatile and standardized data exchange format for species partition information

MOLECULAR ECOLOGY RESOURCES

IF5.5

2021-08-03

OAAI

Miralles, Aurelien; Ducasse, Jacques; Brouillet, Sophie; Flouri, Tomas; Fujisawa, Tomochika; Kapli, Paschalia; Knowles, L. Lacey; Kumari, Sangeeta; Stamatakis, Alexandros; Sukumaran, Jeet; Lutteropp, Sarah; Vences, Miguel; Puillandre, Nicolas

Multispecies coalescent and its applications to infer species phylogenies and cross-species gene flow

NATIONAL SCIENCE REVIEW

IF17.1

2021-07-15

OAAI

Jiao, Xiyun; Flouri, Tomas; Yang, Ziheng

Phase Resolution of Heterozygous Sites in Diploid Genomes is Important to Phylogenomic Analysis under the Multispecies Coalescent Model

SYSTEMATIC BIOLOGY

IF5.7

2021-06-18

OAAI

Huang, Jun; Bennett, Jeremy; Flouri, Tomas; Leache, Adam D.; Yang, Ziheng

研究方向