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Stephanie C. Hicks

Johns Hopkins Bloomberg School of Public Health

44H指数
308论文数
1.1W被引数
收录论文 57
发表时间
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Molecular programs in human locus coeruleus link APOE and neuromelanin to Alzheimer’s vulnerability人脑蓝斑中的分子程序将APOE和神经黑色素与阿尔茨海默病易感性联系起来
errActa Neuropathologica
IF9.3
err2026-09-11
err0
PREAI
errBernard Mulvey; Heena R. Divecha; Madhavi Tippani; Svitlana V. Bach; Rahul Bharadwaj; Ishbel Del Rosario; Sarah E. Maguire; Ryan A. Miller; Aaron J. Salisbury; Atharv Chandra; Beau A. Oster; Kelsey D. Montgomery; Sang Ho Kwon; Haya A. Algrain; Alexis R. Papariello; Louise A. Huuki-Myers; Joel E. Kleinman; Leonardo Collado-Torres; Thomas M. Hyde; Shizhong Han; Stephanie C. Hicks; Daniel R. Weinberger; Stephanie C. Page; Kristen R. Maynard; Keri Martinowich
err分享
err收藏
BatchSVG: identifying batch-biased genes in the application of spatially variable gene detection批处理SVG：在空间可变基因检测应用中识别批次偏倚基因
errBioinformatics
IF5.4
err2026-07-16
err0
errOAAI
errKinnary Shah; Christine Hou; Jacqueline R Thompson; Stephanie C Hicks; null; null
err分享
err收藏
Label-free selection of marker genes in single-cell and spatial transcriptomics with geneCover基于geneCover的无标记标记基因在单细胞和空间转录组学中的选择
errGENOME RESEARCH
IF5.5
err2025-12-01
err1
PREAI
errWang, An; Hicks, Stephanie; Geman, Donald; Younes, Laurent
err分享
err收藏
Spherical PCA: a transparent and scalable approach to quantifying the Waddington Landscape in single-cell RNA-seq data
errJOURNAL OF IMMUNOLOGY
IF3.4
err2025-11-01
err0
PREAI
errYuan, Long; Li, Xuyang; Hicks, Stephanie C.; Taube, Janis M.; Szalay, Alexander S.
err分享
err收藏
Transcriptomic diversity of amygdalar subdivisions across humans and nonhuman primates杏仁核亚区的转录组多样性在人类和非人灵长类动物中的比较
errScience Advances
IF12.5
err2025-09-17
err0
errOAAI
errMichael S. Totty; Rita Cervera Juanes; Svitlana V. Bach; Lamya Ben Ameur; Madeline R. Valentine; Evan Simons; McKenna D. Romac; Hoa Trinh; Krystal Henderson; Ishbel Del Rosario; Madhavi Tippani; Ryan A. Miller; Joel E. Kleinman; Stephanie Cerceo Page; Arpiar Saunders; Thomas M. Hyde; Keri Martinowich; Stephanie C. Hicks; Vincent D. Costa
err分享
err收藏
Spatial mutual nearest neighbors for spatial transcriptomics data周, H.; Panwar, P.; Guo, B.; Hallinan, C.; Ghazanfar, S.; Hicks, S.C. 空间相互最近邻用于空间转录组学数据. Bioinformatics 2025, 41, btaf403. [Google Scholar] [CrossRef]
errBIOINFORMATICS
IF5.4
err2025-08-01
err1
errOAAI
errZhou, Haowen; Panwar, Pratibha; Guo, Boyi; Hallinan, Caleb; Ghazanfar, Shila; Hicks, Stephanie C.
err分享
err收藏
An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus整合单核与空间转录组学图谱揭示了人类海马体的分子景观
errNature Neuroscience
IF20
err2025-07-30
err0
errOAAI
errJacqueline R. Thompson; Erik D. Nelson; Madhavi Tippani; Anthony D. Ramnauth; Heena R. Divecha; Ryan A. Miller; Nicholas J. Eagles; Elizabeth A. Pattie; Sang Ho Kwon; Svitlana V. Bach; Uma M. Kaipa; Jianing Yao; Christine Hou; Joel E. Kleinman; Leonardo Collado-Torres; Shizhong Han; Kristen R. Maynard; Thomas M. Hyde; Keri Martinowich; Stephanie C. Page; Stephanie C. Hicks
err分享
err收藏
Transcriptional Dynamics of Sleep Deprivation and Subsequent Recovery Sleep in the Male Mouse Cortex睡眠剥夺及后续恢复睡眠在雄性小鼠皮质中的转录动力学
errSLEEP
IF4.9
err2025-05-19
err0
PREAI
errOttaway, Caitlin; Popescu, Alexander; Ford, Kaitlyn; Patterson, Taylor; Ingiosi, Ashley; Medina, Elizabeth; Hicks, Stephanie; Singletary, Kristan; Peixoto, Lucia
err分享
err收藏
lute: estimating the cell composition of heterogeneous tissue with varying cell sizes using gene expressionlute：利用基因表达估计异质性组织中不同细胞大小的细胞组成
errBMC GENOMICS
IF3.7
err2025-05-01
err0
errOAAI
errMaden, Sean K.; Huuki-Myers, Louise A.; Kwon, Sang Ho; Collado-Torres, Leonardo; Maynard, Kristen R.; Hicks, Stephanie C.
err分享
err收藏
Missing cell types in single-cell references impact deconvolution of bulk data but are detectable单细胞参考文献中缺失的细胞类型会影响全基因组数据的解卷积，但可被检测到。
errGENOME BIOLOGY
IF9.4
err2025-04-07
err0
errOAAI
errIvich, Adriana; Davidson, Natalie R.; Grieshober, Laurie; Li, Weishan; Hicks, Stephanie C.; Doherty, Jennifer A.; Greene, Casey S.
err分享
err收藏
Benchmark of cellular deconvolution methods using a multi-assay dataset from postmortem human prefrontal cortex使用来自死后人类前额叶皮层的多测定数据集对细胞解卷积方法进行基准测试
errGENOME BIOLOGY
IF9.4
err2025-04-07
err3
errOAAI
errHuuki-Myers, Louise A.; Montgomery, Kelsey D.; Kwon, Sang Ho; Cinquemani, Sophia; Eagles, Nicholas J.; Gonzalez-Padilla, Daianna; Maden, Sean K.; Kleinman, Joel E.; Hyde, Thomas M.; Hicks, Stephanie C.; Maynard, Kristen R.; Collado-Torres, Leonardo
err分享
err收藏
Spatiotemporal analysis of gene expression in the human dentate gyrus reveals age-associated changes in cellular maturation and neuroinflammation人类齿状回基因表达的空间-时间分析揭示了与年龄相关的细胞成熟和神经炎症的变化
errCELL REPORTS
IF6.9
err2025-02-01
err0
errOAAI
errRamnauth, Anthony D.; Tippani, Madhavi; Divecha, Heena R.; Papariello, Alexis R.; Miller, Ryan A.; Nelson, Erik D.; Thompson, Jacqueline R.; Pattie, Elizabeth A.; Kleinman, Joel E.; Maynard, Kristen R.; Collado-Torres, Leonardo; Hyde, Thomas M.; Martinowich, Keri; Hicks, Stephanie C.; Page, Stephanie C.
err分享
err收藏
Transcriptomic characterization of human lateral septum neurons reveals conserved and divergent marker genes across species人类外侧 septum 神经元的转录组学表征揭示了跨物种保守性和差异性标记基因
errISCIENCE
IF4.1
err2025-02-01
err1
errOAAI
errPhillips III, Robert A.; Oh, Seyun; Bach, Svitlana V.; Du, Yufeng; Miller, Ryan A.; Kleinman, Joel E.; Hyde, Thomas M.; Hicks, Stephanie C.; Page, Stephanie C.
err分享
err收藏
SPATIAL-MOLECULAR SEX DIFFERENCES IN THE HUMAN VENTROMEDIAL AND ARCUATE HYPOTHALAMUS
errEUROPEAN NEUROPSYCHOPHARMACOLOGY
IF6.7
err2024-10-01
err0
PREAI
errMulvey, Bernard; Wang, Yi; Divecha, Heena R.; Bach, Svitlana; Montgomery, Kelsey D.; Cinquemani, Sophia; Du, Yufeng; Miller, Ryan; Kleinman, Joel E.; Page, Stephanie Cerceo; Hyde, Thomas M.; Hicks, Stephanie C.; Hansen, Kasper D.; Martinowich, Keri; Maynard, Kristen R.
err分享
err收藏
The tidyomics ecosystem: enhancing omic data analyses
errNATURE METHODS
IF32.1
err2024-06-14
err2
PREAI
errHutchison, William J.; Keyes, Timothy J.; Crowell, Helena L.; Serizay, Jacques; Soneson, Charlotte; Davis, Eric S.; Sato, Noriaki; Moses, Lambda; Tarlinton, Boyd; Nahid, Abdullah A.; Kosmac, Miha; Clayssen, Quentin; Yuan, Victor; Mu, Wancen; Park, Ji-Eun; Mamede, Izabela; Ryu, Min Hyung; Axisa, Pierre-Paul; Paiz, Paulina; Poon, Chi-Lam; Tang, Ming; Gottardo, Raphael; Morgan, Martin; Lee, Stuart; Lawrence, Michael; Hicks, Stephanie C.; Nolan, Garry P.; Davis, Kara L.; Papenfuss, Anthony T.; Love, Michael I.; Mangiola, Stefano
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err收藏
Partnering With Authors to Enhance Reproducibility at JASA
errJOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION
IF3
err2024-04-25
err1
PREAI
errWrobel, Julia; Hector, Emily C.; Crawford, Lorin; Mcgowan, Lucy D'Agostino; da Silva, Natalia; Goldsmith, Jeff; Hicks, Stephanie; Kane, Michael; Lee, Youjin; Mayrink, Vinicius; Paciorek, Christopher J.; Usher, Therri; Wolfson, Julian
err分享
err收藏
Detecting differential transcript usage in complex diseases with SPIT
errCELL REPORTS METHODS
IF4.5
err2024-03-01
err0
errOAAI
errErdogdu, Beril; Varabyou, Ales; Hicks, Stephanie C.; Salzberg, Steven L.; Pertea, Mihaela
err分享
err收藏
The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics通过单核和空间分辨转录组学揭示的人类蓝斑的基因表达景观
errELIFE
IF0
err2024-01-24
err7
errOAAI
errWeber, Lukas M.; Divecha, Heena R.; Tran, Matthew N.; Kwon, Sang Ho; Spangler, Abby; Montgomery, Kelsey D.; Tippani, Madhavi; Bharadwaj, Rahul; Kleinman, Joel E.; Page, Stephanie C.; Hyde, Thomas M.; Collado-Torres, Leonardo; Maynard, Kristen R.; Martinowich, Keri; Hicks, Stephanie C.
err分享
err收藏
Challenges and opportunities to computationally deconvolve heterogeneous tissue with varying cell sizes using single-cell RNA-sequencing datasets使用单细胞RNA测序数据集对具有不同细胞大小的异质组织进行计算去卷积的挑战和机遇
errGENOME BIOLOGY
IF9.4
err2023-12-14
err13
errOAAI
errMaden, Sean K.; Kwon, Sang Ho; Huuki-Myers, Louise A.; Collado-Torres, Leonardo; Hicks, Stephanie C.; Maynard, Kristen R.
err分享
err收藏
A statistical framework for differential pseudotime analysis with multiple single-cell RNA-seq samples
errNATURE COMMUNICATIONS
IF15.7
err2023-11-10
err13
errOAAI
errHou, Wenpin; Ji, Zhicheng; Chen, Zeyu; Wherry, E. John; Hicks, Stephanie C.; Ji, Hongkai
err分享
err收藏

研究方向

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合作学者
合作期刊
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Richard A. Gibbs
H 指数: 190 · 论文数: 1.3K
D
Daniel R. Weinberger
H 指数: 172 · 论文数: 1.2K
S
Steven L. Salzberg
H 指数: 160 · 论文数: 600
M
Michael Diamond
H 指数: 160 · 论文数: 1.5K
D
Donna M. Muzny
H 指数: 156 · 论文数: 693
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