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Paulo C. T. Souza

Ecole Normale Superieure de Lyon

36H指数
153论文数
6.9K被引数
收录论文 57
发表时间
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The Sec11 C-terminal short helix promotes productive engagement of internal signal sequences with the signal peptidase complexSec11 C端短螺旋促进内源信号序列与信号肽酶复合物的有效结合
errJournal of Biological Chemistry
IF3.9
err2026-09-01
err0
PREAI
errChung, Yeonji; Borbuliak, Mariia; Hwang, Sanghun; Souza, Paulo C. T.; Kim, Hyun
err分享
err收藏
Enhanced Condensation of RNA Repeats Induced by Terahertz Oscillatory Fields太赫兹振荡场诱导的RNA重复序列增强性凝聚
errMolecules
IF4.6
err2026-06-01
err0
errOAAI
errQin Zhang; Mariana Valério; Kaicheng Wang; Lixia Yang; Shaomeng Wang; Paulo C. T. Souza; Yubin Gong
err分享
err收藏
Coarse-Grained Simulations Reveal Salt- and Length-Dependent Condensation of G4C2 RNA Repeats粗粒化模拟揭示G4C2 RNA重复序列的盐浓度和长度依赖性凝聚
errThe Journal of Physical Chemistry Letters
IF0
err2026-06-01
err0
PREAI
errQin Zhang; Mariana Valério; Linus Grünewald; Luís Borges-Araújo; Fabian Grünewald; Shaomeng Wang; Siewert J. Marrink; Yubin Gong; Paulo C. T. Souza
err分享
err收藏
Structural basis of signal peptide recognition by the signal peptidase complex信号肽识别的信号肽酶复合物结构基础
errNature Communications
IF15.7
err2026-05-22
err0
errOAAI
errA. Manuel Liaci; Dimitrios Vismpas; Lisbeth R. Kjølbye; Ioannis Skalidis; Gilberto P. Pereira; Adrian Fujiet Koh; Mariska Gröllers-Mulderij; Abhay Kotecha; Paulo C. T. Souza; Friedrich Förster
err分享
err收藏
Martini 3 Building Blocks for Lipid Nanoparticle Design
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2025-12-01
err1
PREAI
errKjolbye, Lisbeth R.; Valerio, Mariana; Paloncyova, Marketa; Borges-Araujo, Luis; Pestana-Nobles, Roberto; Grunewald, Fabian; Bruininks, Bart M. H.; Araya-Osorio, Rocio; Srejber, Martin; Mera-Adasme, Raul; Monticelli, Luca; Marrink, Siewert J.; Otyepka, Michal; Wu, Sangwook; Souza, Paulo C. T.
err分享
err收藏
Fast Parametrization of Martini3 Models for Fragments and Small Molecules
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2025-12-01
err0
PREAI
errSzczuka, Magdalena; Pereira, Gilberto P.; Walter, Luis J.; Gueroult, Marc; Poulain, Pierre; Bereau, Tristan; Souza, Paulo C. T.; Chavent, Matthieu
err分享
err收藏
Allosteric pathway connects Zn(II) loss from SOD1 to known pathogenic mechanisms别构通路连接SOD1中Zn(II)的丢失与已知的致病机制
errInternational Journal of Biological Macromolecules
IF8.5
err2025-10-16
err0
PREAI
errRocío Araya-Osorio; Moisés Dominguez; Sebastian Thallmair; Siewert J. Marrink; Paulo C.T. Souza; Raúl Mera-Adasme
err分享
err收藏
Creating Coarse-Grained Systems with COBY: Toward Higher Accuracy of Complex Biological Systems使用COBY创建粗粒度系统: 提高复杂生物系统的准确性
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2025-05-12
err0
errOAAI
errAndreasen, Mikkel D.; Souza, Paulo C. T.; Schiott, Birgit; Zuzic, Lorena
err分享
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GōMartini 3: From large conformational changes in proteins to environmental bias correctionsGōMartini 3：从蛋白质的大构象变化到环境偏差校正
errNATURE COMMUNICATIONS
IF15.7
err2025-04-30
err1
errOAAI
errSouza, Paulo C. T.; Borges-Araujo, Luis; Brasnett, Christopher; Moreira, Rodrigo A.; Park, Peter; Wang, Liguo; Razmazma, Hafez; Borges-Araujo, Ana C.; Monticelli, Luca; Mera-Adasme, Raul; Melo, Manuel N.; Wu, Sangwook; Poma, Adolfo B.; Thallmair, Sebastian
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Martini3-IDP: improved Martini 3 force field for disordered proteinsMartini3-IDP: 改进的Martini 3无序蛋白质力场
errNATURE COMMUNICATIONS
IF15.7
err2025-03-24
err1
errOAAI
errWang, Liguo; Brasnett, Christopher; Borges-Araujo, Luis; Souza, Paulo C. T.
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err收藏
Systematic Approach to Parametrization of Disaccharides for the Martini 3 Coarse-Grained Force Field马提尼3粗粒力场二糖参数化的系统方法
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2025-01-17
err0
errOAAI
errBrandner, Astrid F.; Smith, Iain P. S.; Marrink, Siewert J.; Souza, Paulo C. T.; Khalid, Syma
err分享
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Spc2 modulates substrate- and cleavage site-selection in the yeast signal peptidase complex
errJOURNAL OF CELL BIOLOGY
IF6.4
err2024-11-20
err0
errOAAI
errChung, Yeonji; Yim, Chewon; Pereira, Gilberto P.; Son, Sungjoon; Kjolbye, Lisbeth R.; Mazurkiewicz, Lauren E.; Weeks, Amy M.; Foerster, Friedrich; von Heijne, Gunnar; Souza, Paulo C. T.; Kim, Hyun
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A millisecond coarse-grained simulation approach to decipher allosteric cannabinoid binding at the glycine receptor α1一种毫秒级粗粒度模拟方法，用于破译甘氨酸受体 α1上的变构大麻素结合
errNATURE COMMUNICATIONS
IF15.7
err2024-10-19
err0
errOAAI
errBartocci, Alessio; Grazzi, Andrea; Awad, Nour; Corringer, Pierre-Jean; Souza, Paulo C. T.; Cecchini, Marco
err分享
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Depletion of membrane cholesterol modifies structure, dynamic and activation of Nav1.7 v 1.7膜胆固醇的消耗改变了nav1.7v 1.7的结构，动力学和活化
errINTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
IF8.5
err2024-10-01
err1
errOAAI
errAlbani, Simone; Eswaran, Vishal Sudha Bhagavath; Piergentili, Alessia; de Souza, Paulo Cesar Telles; Lampert, Angelika; Rossetti, Giulia
err分享
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OLIVES: A Go-like Model for Stabilizing Protein Structure via Hydrogen Bonding Native Contacts in the Martini 3 Coarse-Grained Force Field
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2024-09-05
err3
errOAAI
errPedersen, Kasper B.; Borges-Araujo, Luis; Stange, Amanda D.; Souza, Paulo C. T.; Marrink, Siewert J.; Schiott, Birgit
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Bartender: Martini 3 Bonded Terms via Quantum Mechanics-Based Molecular Dynamics
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2024-06-26
err3
errOAAI
errPereira, Gilberto P.; Alessandri, Riccardo; Dominguez, Moises; Araya-Osorio, Rocio; Grunewald, Linus; Borges-Araujo, Luis; Wu, Sangwook; Marrink, Siewert J.; Souza, Paulo C. T.; Mera-Adasme, Raul
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Bending of a lipid membrane edge by annexin A5 trimers
errBIOPHYSICAL JOURNAL
IF3.1
err2024-04-01
err1
errOAAI
errPandey, Mayank Prakash; de Souza, Paulo Cesar Telles; Pezeshkian, Weria; Khandelia, Himanshu
err分享
err收藏
Identification of inhibitors targeting the energy-coupling factor (ECF) transporters (vol 6, 1182, 2023)
errCOMMUNICATIONS BIOLOGY
IF5.1
err2024-01-09
err0
errOAAI
errDiamanti, Eleonora; Souza, Paulo C. T.; Setyawati, Inda; Bousis, Spyridon; Monjas, Leticia; Swier, Lotteke J. Y. M.; Shams, Atanaz; Tsarenko, Aleksei; Stanek, Weronika K.; Jaeger, Manuel; Marrink, Siewert J.; Slotboom, Dirk J.; Hirsch, Anna K. H.
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Martini 3 Force Field Parameters for Protein Lipidation Post-Translational Modifications
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2023-11-29
err2
errOAAI
errKoukos, Panagiotis I.; Dehghani-Ghahnaviyeh, Sepehr; Velez-Vega, Camilo; Manchester, John; Tieleman, D. Peter; Duca, Jose S.; Souza, Paulo C. T.; Cournia, Zoe
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err收藏
CGCompiler: Automated Coarse-Grained Molecule Parametrization via Noise-Resistant Mixed-Variable Optimization
errJOURNAL OF CHEMICAL THEORY AND COMPUTATION
IF5.5
err2023-11-16
err5
PREAI
errStroh, Kai Steffen; Souza, Paulo C. T.; Monticelli, Luca; Risselada, Herre Jelger
err分享
err收藏

研究方向

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合作期刊
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H 指数: 110 · 论文数: 731
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H 指数: 108 · 论文数: 88
M
Mark S.P. Sansom
H 指数: 105 · 论文数: 962
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