Olivier Lespinet - Publications, H-index & Citations

Olivier Lespinet

centre national de la recherche scientifique (cnrs)

24H指数

114论文数

3.0K被引数

收录论文 24

发表时间

The ribosome profiling landscape of yeast reveals a high diversity in pervasive translation 酵母的核糖体分析景观揭示了普遍翻译的高度多样性

GENOME BIOLOGY

IF9.4

2024-10-14

OAAI

Papadopoulos, Chris; Arbes, Hugo; Cornu, David; Chevrollier, Nicolas; Blanchet, Sandra; Roginski, Paul; Rabier, Camille; Atia, Safiya; Lespinet, Olivier; Namy, Olivier; Lopes, Anne

Synteruptor: mining genomic islands for non-classical specialized metabolite gene clusters

genomics proteomics bioinformatics

IF2.8

2024-06-19

OAAI

Haas, Drago; Barba, Matthieu; Vicente, Claudia M.; Nezbedova, Sarka; Garenaux, Amelie; Bury-Mone, Stephanie; Lorenzi, Jean-Noel; Hotel, Laurence; Laureti, Luisa; Thibessard, Annabelle; Le Goff, Geraldine; Ouazzani, Jamal; Leblond, Pierre; Aigle, Bertrand; Pernodet, Jean-Luc; Lespinet, Olivier; Lautru, Sylvie

CusProSe: a customizable protein annotation software with an application to the prediction of fungal secondary metabolism genes

SCIENTIFIC REPORTS

IF3.9

2023-01-25

OAAI

Oliveira, Leonor; Chevrollier, Nicolas; Dallery, Jean-Felix; O'Connell, Richard J. J.; Lebrun, Marc-Henri; Viaud, Muriel; Lespinet, Olivier

A Phylogenetic Framework to Simulate Synthetic Interspecies RNA-Seq Data

MOLECULAR BIOLOGY AND EVOLUTION

IF5.3

2022-12-12

OAAI

Bastide, Paul; Soneson, Charlotte; Stern, David B.; Lespinet, Olivier; Gallopin, Melina

On the predictibility of A-minor motifs from their local contexts

RNA BIOLOGY

IF3.4

2022-11-16

OAAI

Gianfrotta, Coline; Reinharz, Vladimir; Lespinet, Olivier; Barth, Dominique; Denise, Alain

Intergenic ORFs as elementary structural modules of de novo gene birth and protein evolution

GENOME RESEARCH

IF5.5

2021-11-22

OAAI

Papadopoulos, Chris; Callebaut, Isabelle; Gelly, Jean-Christophe; Hatin, Isabelle; Namy, Olivier; Renard, Maxime; Lespinet, Olivier; Lopes, Anne

Dynamics of the compartmentalized Streptomyces chromosome during metabolic differentiation

NATURE COMMUNICATIONS

IF15.7

2021-09-01

OAAI

Lioy, Virginia S.; Lorenzi, Jean-Noel; Najah, Soumaya; Poinsignon, Thibault; Leh, Herve; Saulnier, Corinne; Aigle, Bertrand; Lautru, Sylvie; Thibessard, Annabelle; Lespinet, Olivier; Leblond, Pierre; Jaszczyszyn, Yan; Gorrichon, Kevin; Varoquaux, Nelle; Junier, Ivan; Boccard, Frederic; Pernodet, Jean-Luc; Bury-Mone, Stephanie

Subtelomeres are fast- evolving regions of the Streptomyces linear chromosome

MICROBIAL GENOMICS

IF4

2021-03-24

OAAI

Lorenzi, Jean-Noel; Lespinet, Olivier; Leblond, Pierre; Thibessard, Annabelle

Massive Gene Flux Drives Genome Diversity between Sympatric Streptomyces Conspecifics

MBIO

IF4.7

2019-10-29

OAAI

Tidjani, Abdoul-Razak; Lorenzi, Jean-Noel; Toussaint, Maxime; van Dijk, Erwin; Naquin, Delphine; Lespinet, Olivier; Bontemps, Cyril; Leblond, Pierre

Comparative Genomics among Closely Related Streptomyces Strains Revealed Specialized Metabolite Biosynthetic Gene Cluster Diversity 密切相关的链霉菌菌株之间的比较基因组学揭示了专门的代谢物生物合成基因簇多样性

ANTIBIOTICS-BASEL

IF4.6

2018-10-02

OAAI

Vicente, Claudia M.; Thibessard, Annabelle; Lorenzi, Jean-Noel; Benhadj, Mabrouka; Hotel, Laurence; Gacemi-Kirane, Djamila; Lespinet, Olivier; Leblond, Pierre; Aigle, Bertrand

Gapless genome assembly of Colletotrichum higginsianum reveals chromosome structure and association of transposable elements with secondary metabolite gene clusters 希金炭疽菌的无间隙基因组组装揭示了染色体结构以及转座因子与次级代谢产物基因簇的关联

BMC GENOMICS

IF3.7

2017-08-29

OAAI

Dallery, Jean-Felix; Lapalu, Nicolas; Zampounis, Antonios; Pigne, Sandrine; Luyten, Isabelle; Amselem, Joelle; Wittenberg, Alexander H. J.; Zhou, Shiguo; de Queiroz, Marisa V.; Robin, Guillaume P.; Auger, Annie; Hainaut, Matthieu; Henrissat, Bernard; Kim, Ki-Tae; Lee, Yong-Hwan; Lespinet, Olivier; Schwartz, David C.; Thon, Michael R.; O'Connell, Richard J.

Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi (vol 7, 11362, 2016)

NATURE COMMUNICATIONS

IF15.7

2016-09-29

OAAI

Hacquard, Stephane; Kracher, Barbara; Hiruma, Kei; Munch, Philipp C.; Garrido-Oter, Ruben; Thon, Michael R.; Weimann, Aaron; Damm, Ulrike; Dallery, Jean-Felix; Hainaut, Matthieu; Henrissat, Bernard; Lespinet, Olivier; Sacristan, Soledad; van Themaat, Emiel Ver Loren; Kemen, Eric; McHardy, Alice C.; Schulze-Lefert, Paul; O'Connell, Richard J.

Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi

NATURE COMMUNICATIONS

IF15.7

2016-05-06

184

OAAI

Hacquard, Stephane; Kracher, Barbara; Hiruma, Kei; Muech, Philipp C.; Garrido-Oter, Ruben; Thon, Michael R.; Weimann, Aaron; Damm, Ulrike; Dallery, Jean-Felix; Hainaut, Matthieu; Henrissat, Bernard; Lespinet, Olivier; Sacristan, Soledad; van Themaat, Emiel Ver Loren; Kemen, Eric; McHardy, Alice C.; Schulze-Lefert, Paul; O'Connell, Richard J.

A meta-approach for improving the prediction and the functional annotation of ortholog groups

BMC GENOMICS

IF3.7

2014-10-17

OAAI

Pereira, Cecile; Denise, Alain; Lespinet, Olivier

Profiling the orphan enzymes

BIOLOGY DIRECT

IF4.9

2014-01-01

OAAI

Sorokina, Maria; Stam, Mark; Medigue, Claudine; Lespinet, Olivier; Vallenet, David

Comparative genomics of emerging pathogens in the Candida glabrata clade 光滑念珠菌进化枝中新兴病原体的比较基因组学

BMC GENOMICS

IF3.7

2013-01-01

157

OAAI

Gabaldon, Toni; Martin, Tiphaine; Marcet-Houben, Marina; Durrens, Pascal; Bolotin-Fukuhara, Monique; Lespinet, Olivier; Arnaise, Sylvie; Boisnard, StePhanie; Aguileta, Gabriela; Atanasova, Ralitsa; Bouchier, Christiane; Couloux, Arnaud; Creno, Sophie; Cruz, Jose Almeida; Devillers, Hugo; Enache-Angoulvant, Adela; Guitard, Juliette; Jaouen, Laure; Ma, Laurence; Marck, Christian; Neuveglise, Cecile; Pelletier, Eric; Pinard, Amelie; Poulain, Julie; Recoquillay, Julien; Westhof, Eric; Wincker, Patrick; Dujon, Bernard; Hennequin, Christophe; Fairhead, Cecile

FUNGIpath: a tool to assess fungal metabolic pathways predicted by orthology

BMC GENOMICS

IF3.7

2010-02-01

OAAI

Grossetete, Sandrine; Labedan, Bernard; Lespinet, Olivier

Assessment of phylogenetic diversity of bacterial microflora in drinking water using serial analysis of ribosomal sequence tags

WATER RESEARCH

IF12.4

2009-09-01

PREAI

Poitelon, Jean-Baptiste; Joyeux, Michel; Welte, Benedicte; Duguet, Jean-Pierre; Prestel, Eric; Lespinet, Olivier; DuBow, Michael S.

The genome sequence of the model ascomycete fungus Podospora anserina

GENOME BIOLOGY

IF9.4

2008-05-06

356

OAAI

Espagne, Eric; Lespinet, Olivier; Malagnac, Fabienne; Da Silva, Corinne; Jaillon, Olivier; Porcel, Betina M.; Couloux, Arnaud; Aury, Jean-Marc; Segurens, Beatrice; Poulain, Julie; Anthouard, Veronique; Grossetete, Sandrine; Khalili, Hamid; Coppin, Evelyne; Dequard-Chablat, Michelle; Picard, Marguerite; Contamine, Veronique; Arnaise, Sylvie; Bourdais, Anne; Berteaux-Lecellier, Veronique; Gautheret, Daniel; de Vries, Ronald P.; Battaglia, Evy; Coutinho, Pedro M.; Danchin, Etienne G. J.; Henrissat, Bernard; El Khoury, Riyad; Sainsard-Chanet, Annie; Boivin, Antoine; Pinan-Lucarre, Berangere; Sellem, Carole H.; Debuchy, Robert; Wincker, Patrick; Weissenbach, Jean; Silar, Philippe

The multiple facets of homology and their use in comparative genomics to study the evolution of genes, genomes, and species

BIOCHIMIE

IF3

2008-04-01

PREAI

Descorps-Declere, Stephane; Lemoine, Frederic; Sculo, Quentin; Lespinet, Olivier; Labedan, Bernard

研究方向