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Pieter Verschaffelt

vib

11H指数
46论文数
536被引数
收录论文 16
发表时间
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Machine learning-based rescoring with MS²Rescore boosts peptide identification and taxonomic specificity in metaproteomics基于机器学习的MS²Rescore重评分方法提升元蛋白质组学的肽段鉴定和分类学特异性
errEnvironmental Microbiome
IF5.4
err2026-09-16
err0
errOAAI
errXuxa Malliet; Arthur Declercq; Ralf Gabriels; Tanja Holstein; Bart Mesuere; Thilo Muth; Pieter Verschaffelt; Christine Carapito; Lennart Martens; Tim Van Den Bossche
err分享
err收藏
Integrating multi-omics technologies to decipher microbiome functions整合多组学技术以解析微生物组功能
errNature Communications
IF15.7
err2026-09-08
err0
errOAAI
errTim Van Den Bossche; Eunice Adeline Lazau; Velma T. E. Aho; J. Alfredo Blakeley-Ruiz; Maximilian Wolf; Benoit Josef Kunath; Luis E. Valentin-Alvarado; Patrick Hellwig; Pieter Verschaffelt; Andrew T. Rajczewski; Jannie. G. E. Henderickx; Tomi Suomi; Feng Xian; Shruti Shah; Lennart Martens; Dirk Benndorf; Samir R. Damare; Bastiaan Willem Haak; Sven-Bastiaan Haange; Paul D. Piehowski; Anne Kupczok; Daniel Figeys; Bart Mesuere; Magnus Palmblad; Robert L. Hettich; Laura L. Elo; Juan Antonio Vizcaíno; Neha Garg; Zhong Wang; Muzaffer Arıkan; Lee Ann McCue; Timothy J. Griffin; Laure-Alix Clerbaux; Robert Heyer; Marnix H. Medema; Sabine Matallana-Surget; David Gomez-Varela; Thilo Muth; Bree Tillett; Jean Armengaud; Robert D. Finn; Paul Wilmes; J. Gregory Caporaso; Lucia Grenga; Pratik Dilip Jagtap
err分享
err收藏
The Metaproteomics Initiative: five years of community-driven progress元蛋白质组学倡议：五年社区驱动的进展
errMicrobiome
IF12.7
err2026-07-23
err0
errOAAI
errTim Van Den Bossche; Lucia Grenga; Gelio Alves; Magnus Ø. Arntzen; Dirk Benndorf; Madita Brauer; Daniel Figeys; Celine Henry; Robert L. Hettich; Robert Heyer; Pratik D. Jagtap; Nico Jehmlich; Manuel Kleiner; Leyuan Li; Bart Mesuere; Martin Pabst; Jagroop Pandhal; Phillip B. Pope; Jana Seifert; Anke Trautwein-Schult; Pieter Verschaffelt; Paul Wilmes; Jean Armengaud; Benoit J. Kunath
err分享
err收藏
The need for standardization and improved open (meta)data practices in metaproteomics元蛋白质组学中对标准化和改进开放（元）数据实践的必要性
errMicrobiome
IF12.7
err2026-07-23
err0
errOAAI
errTim Van Den Bossche; Maximilian Wolf; Jean Armengaud; Magnus Ø. Arntzen; Dirk Benndorf; Daniel Figeys; Lucia Grenga; Robert L. Hettich; Nithu Sara John; Pratik Jagtap; Nico Jehmlich; Manuel Kleiner; Benoit J. Kunath; Leyuan Li; Mary Lipton; Bart Mesuere; Benjamin A. Neely; Zhibin Ning; Ane Laura Pedersen; Yasset Perez-Riverol; Jeena Rajan; Kay Schallert; Jana Seifert; Sergio Uzzau; Pieter Verschaffelt; Paul Wilmes; Juan Antonio Vizcaíno; Lennart Martens; Robert Heyer
err分享
err收藏
The Peptonizer2000: Bringing Confidence to MetaproteomicsPeptonizer2000：为元蛋白质组学带来信心
errJournal of Proteome Research
IF3.6
err2026-03-03
err0
errOAAI
errTanja Holstein; Pieter Verschaffelt; Tim Van Den Bossche; Simon Van de Vyver; Lennart Martens; Bart Mesuere; Thilo Muth
err分享
err收藏
Direct construction of sparse suffix arrays with Libsais使用Libsais直接构造稀疏后缀数组
errBMC Bioinformatics
IF3.3
err2025-10-19
err0
errOAAI
errSimon Van de Vyver; Tibo Vande Moortele; Peter Dawyndt; Bart Mesuere; Pieter Verschaffelt
err分享
err收藏
PathwayPilot: A User-Friendly Tool for Visualizing and Navigating Metabolic Pathways
errMOLECULAR & CELLULAR PROTEOMICS
IF5.5
err2025-03-01
err0
errOAAI
errVande Moortele, Tibo; Verschaffelt, Pieter; Huang, Qingyao; Doncheva, Nadezhda T.; Holstein, Tanja; Jachmann, Caroline; Dawyndt, Peter; Martens, Lennart; Mesuere, Bart; van den Bossche, Tim
err分享
err收藏
Unipept in 2024: Expanding Metaproteomics Analysis with Support for Missed Cleavages and Semitryptic and Nontryptic Peptides
errJOURNAL OF PROTEOME RESEARCH
IF3.6
err2025-01-10
err1
PREAI
errVande Moortele, Tibo; Devlaminck, Bram; van de Vyver, Simon; van den Bossche, Tim; Martens, Lennart; Dawyndt, Peter; Mesuere, Bart; Verschaffelt, Pieter
err分享
err收藏
Unipept Desktop 2.0: Construction of Targeted Reference Protein Databases for Metaproteogenomics AnalysesUnipept桌面2.0: 用于元蛋白基因组学分析的靶向参考蛋白数据库的构建
errJOURNAL OF PROTEOME RESEARCH
IF3.6
err2023-07-17
err9
errOAAI
errVerschaffelt, Pieter; Tanca, Alessandro; Abbondio, Marcello; van den Bossche, Tim; Moortele, Tibo Vande; Dawyndt, Peter; Martens, Lennart; Mesuere, Bart
err分享
err收藏
UMGAP: the Unipept MetaGenomics Analysis Pipeline
errBMC GENOMICS
IF3.7
err2022-06-10
err3
errOAAI
errVan der Jeugt, Felix; Maertens, Rien; Steyaert, Aranka; Verschaffelt, Pieter; De Tender, Caroline; Dawyndt, Peter; Mesuere, Bart
err分享
err收藏
Pout2Prot:AnEfficient Tool to Create Protein (Sub)groups from Percolator Output Files
errJOURNAL OF PROTEOME RESEARCH
IF3.6
err2022-02-10
err8
errOAAI
errSchallert, Kay; Verschaffelt, Pieter; Mesuere, Bart; Benndorf, Dirk; Martens, Lennart; Van den Bossche, Tim
err分享
err收藏
Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows元蛋白质组研究的批判性评估 (CAMPI): 已建立工作流程的多实验室比较
errNATURE COMMUNICATIONS
IF15.7
err2021-12-15
err43
errOAAI
errVan den Bossche, Tim; Kunath, Benoit J.; Schallert, Kay; Schaepe, Stephanie S.; Abraham, Paul E.; Armengaud, Jean; Arntzen, Magnus O.; Bassignani, Ariane; Benndorf, Dirk; Fuchs, Stephan; Giannone, Richard J.; Griffin, Timothy J.; Hagen, Live H.; Halder, Rashi; Henry, Celine; Hettich, Robert L.; Heyer, Robert; Jagtap, Pratik; Jehmlich, Nico; Jensen, Marlene; Juste, Catherine; Kleiner, Manuel; Langella, Olivier; Lehmann, Theresa; Leith, Emma; May, Patrick; Mesuere, Bart; Miotello, Guylaine; Peters, Samantha L.; Pible, Olivier; Queiros, Pedro T.; Reichl, Udo; Renard, Bernhard Y.; Schiebenhoefer, Henning; Sczyrba, Alexander; Tanca, Alessandro; Trappe, Kathrin; Trezzi, Jean-Pierre; Uzzau, Sergio; Verschaffelt, Pieter; von Bergen, Martin; Wilmes, Paul; Wolf, Maximilian; Martens, Lennart; Muth, Thilo
err分享
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MegaGO: A Fast Yet Powerful Approach to Assess Functional Gene Ontology Similarity across Meta-Omics Data Sets
errJOURNAL OF PROTEOME RESEARCH
IF3.6
err2021-03-04
err11
errOAAI
errVerschaffelt, Pieter; Van den Bossche, Tim; Gabriel, Wassim; Burdukiewicz, Michal; Soggiu, Alessio; Martens, Lennart; Renard, Bernhard Y.; Schiebenhoefer, Henning; Mesuere, Bart
err分享
err收藏
Unipept Desktop: A Faster, More Powerful Metaproteomics Results Analysis Tool
errJOURNAL OF PROTEOME RESEARCH
IF3.6
err2021-01-06
err19
errOAAI
errVerschaffelt, Pieter; Van den Bossche, Tim; Martens, Lennart; Dawyndt, Peter; Mesuere, Bart
err分享
err收藏
Connecting MetaProteomeAnalyzer and PeptideShaker to Unipept for Seamless End-to-End Metaproteomics Data Analysis
errJOURNAL OF PROTEOME RESEARCH
IF3.6
err2020-05-20
err7
errOAAI
errVan den Bossche, Tim; Verschaffelt, Pieter; Schallert, Kay; Barsnes, Harald; Dawyndt, Peter; Benndorf, Dirk; Renard, Bernhard Y.; Mesuere, Bart; Martens, Lennart; Muth, Thilo
err分享
err收藏
Unipept 4.0: Functional Analysis of Metaproteome Data
errJOURNAL OF PROTEOME RESEARCH
IF3.6
err2018-11-22
err106
PREAI
errGurdeep Singh, Robbert; Tanca, Alessandro; Palomba, Antonio; Van der Jeugt, Felix; Verschaffelt, Pieter; Uzzau, Sergio; Martens, Lennart; Dawyndt, Peter; Mesuere, Bart
err分享
err收藏

研究方向

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合作学者
合作期刊
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Martin von Bergen�
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ROBERT FINN
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Robert L. Hettich
H 指数: 81 · 论文数: 583
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J. Gregory Caporaso
H 指数: 80 · 论文数: 264
M
Marnix H. Medema
H 指数: 76 · 论文数: 308
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