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Alexey Zakharov

National Institutes of Health

37H指数
245论文数
5.1K被引数
收录论文 66
发表时间
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A Hybrid Experimental and in silico Platform for ITPK1 Chemical Probe Discovery用于ITPK1化学探针发现的混合实验和计算机平台
errSLAS Discovery
IF2.7
err2026-06-23
err0
errOAAI
errAdam Yasgar; Sankalp Jain; Huanchen Wang; Chih-Shia Lee; Guangning Zong; Haibo Zhang; Eric Lindberg; Carolyn Woodroofe; Kelly Lane; Burchelle Blackman; Dan Crook; Hsiuling Lin; Bolormaa Baljinnyam; Michael Ronzetti; Anton Simeonov; Sandeep Rana; Ganesha Rai; Stephen Shears; Robin E. Stanley; Alexey V. Zakharov
err分享
err收藏
A small molecule VDAC ligand inhibits ERAD and induces selective cancer cell death via disruption of calcium homeostasis小分子VDAC配体抑制ERAD并通过破坏钙稳态诱导选择性癌细胞死亡
errNature Communications
IF15.7
err2026-01-17
err0
errOAAI
errWenjing Yan; Daniel C. Talley; Antara Syam; Carina Danchik; Yongwang Zhong; Xianzheng Zhang; Xiaoying Liu; Bolormaa Baljinnyam; Stephen C. Kales; Matthew G. Cyr; Yuhong Fang; Alexey V. Zakharov; Xin Hu; Taylor Niehoff; Tuan Xu; Yanyan Qu; Allison Yang; Valentine V. Courouble; Qin Yao; Anton Simeonov; Ruili Huang; Tatiana K. Rostovtseva; Sergey M. Bezrukov; Christopher A. LeClair; Josephine M. Egan; Hua Wang; Dingyin Tao; Ganesha Rai; Mark J. Henderson; Shengyun Fang
err分享
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In silico Drug Discovery: Bridging the Gaps in Preclinical Translation计算机辅助药物发现：弥合临床前转化的差距
errDrug Discovery Today
IF7.5
err2025-12-03
err0
PREAI
errSarine Markossian; Hannah M. Baskir; Abigail C. Grossman; Suchismita Chandran; Shyam Rele; Matthew D. Hall; Rommie E. Amaro; Alexander Tropsha; Alexey V. Zakharov
err分享
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From Sequence to Response: AI-Guided Prediction of Nucleic Acid Nanoparticles Immune Recognitions从序列到响应：AI引导的核酸纳米颗粒免疫识别预测
errSmall
IF12.1
err2025-10-28
err0
errOAAI
errM. Brittany Johnson; Sankalp Jain; Jessica McMillan Shea; Quinton Krueger; Erwin Doe; Daniel Miller; Katelynn Pranger; Hannah Hayth; Sable Thornburgh; Justin Halman; Emil F. Khisamutdinov; Alexey V. Zakharov; Kirill A. Afonin
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A Machine Learning Based Analysis Method for Small Molecule High Content Screening of 3D Cancer Spheroid Morphology基于机器学习的3D癌细胞球形态小分子高内涵筛选分析方法
errMolecular Pharmacology
IF3
err2025-08-05
err0
errOAAI
errVishakha Goyal; Dvir Blivis; Steven A. Titus; Misha Itkin; Alexey Zakharov; Kelli Wilson; Natalia J. Martinez; Ty C. Voss
err分享
err收藏
Consensus Modeling Strategies for Predicting Transthyretin Binding Affinity from Tox24 Challenge Data基于Tox24挑战赛数据的转甲状腺素蛋白结合亲和力预测的共识建模策略
errCHEMICAL RESEARCH IN TOXICOLOGY
IF3.8
err2025-05-15
err0
errOAAI
errCirino, Thalita; Pinto, Luis; Iwan, Mateusz; Dougha, Alexis; Lucic, Bono; Kraljevic, Antonija; Navoyan, Zaven; Tevosyan, Ani; Yeghiazaryan, Hrach; Khondkaryan, Lusine; Abelyan, Narek; Atoyan, Vahe; Babayan, Nelly; Iwashita, Yuma; Kimura, Kyosuke; Komasaka, Tomoya; Shishido, Koki; Nakamura, Taichi; Asada, Mizuho; Jain, Sankalp; Zakharov, Alexey V.; Wang, Haobo; Liu, Wenjia; Chupakhin, Vladimir; Uesawa, Yoshihiro
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One size does not fit all: revising traditional paradigms for assessing accuracy of QSAR models used for virtual screening一种尺寸并不适合所有人: 修改传统范式以评估用于虚拟筛查的QSAR模型的准确性
errJOURNAL OF CHEMINFORMATICS
IF5.7
err2025-01-16
err0
errOAAI
errWellnitz, James; Jain, Sankalp; Hochuli, Joshua E.; Maxfield, Travis; Muratov, Eugene N.; Tropsha, Alexander; Zakharov, Alexey V.
err分享
err收藏
Applications of Machine Learning Approaches for the Discovery of SARS-CoV-2 PLpro Inhibitors
errJOURNAL OF CHEMICAL INFORMATION AND MODELING
IF5.3
err2025-01-16
err0
PREAI
errPal, Sourav; Nance, Kellie D.; Joshi, Dirgha Raj; Kales, Stephen C.; Ye, Lin; Hu, Xin; Shamim, Khalida; Zakharov, Alexey V.
err分享
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Pharmacokinetics Profiler (PhaKinPro): Model Development, Validation, and Implementation as a Web Tool for Triaging Compounds with Undesired Pharmacokinetics Profiles
errJOURNAL OF MEDICINAL CHEMISTRY
IF6.8
err2024-04-03
err7
PREAI
errRath, Marielle; Wellnitz, James; Martin, Holli-Joi; Melo-Filho, Cleber; Hochuli, Joshua E.; Silva, Guilherme Martins; Beasley, Jon-Michael; Travis, Maxfield; Sessions, Zoe L.; Popov, Konstantin I.; Zakharov, Alexey V.; Cherkasov, Artem; Alves, Vinicius; Muratov, Eugene N.; Tropsha, Alexander
err分享
err收藏
Lies and Liabilities: Computational Assessment of High-Throughput Screening Hits to Identify Artifact Compounds
errJOURNAL OF MEDICINAL CHEMISTRY
IF6.8
err2023-09-07
err4
PREAI
errAlves, Vinicius M.; Yasgar, Adam; Wellnitz, James; Rai, Ganesha; Rath, Marielle; Braga, Rodolpho C.; Capuzzi, Stephen J.; Simeonov, Anton; Muratov, Eugene N.; Zakharov, Alexey V.; Tropsha, Alexander
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Discovering selective antiferroptotic inhibitors of the 15LOX/PEBP1 complex noninterfering with biosynthesis of lipid mediators发现不干扰脂质介质生物合成的15LOX/PEBP1复合物的选择性抗铁性抑制剂
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2023-06-16
err13
errOAAI
errDar, Haider H.; Ruminska, Karolina Mikulska-; Tyurina, Yulia Y.; Luci, Diane K.; Yasgar, Adam; Samovich, Svetlana N.; Kapralov, Alexander A.; Souryavong, Austin B.; Tyurin, Vladimir A.; Amoscato, Andrew A.; Epperly, Michael W.; V. Shurin, Galina; Standley, Melissa; Holman, Theodore R.; Croix, Claudette M. St.; Watkins, Simon C.; VanDemark, Andrew P.; Rana, Sandeep; V. Zakharov, Alexey; Simeonov, Anton; Marugan, Juan; Mallampalli, Rama K.; Wenzel, Sally E.; Greenberger, Joel S.; Rai, Ganesha; Bayir, Huelya; Bahar, Ivet; Kagan, Valerian E.
err分享
err收藏
Interpretable vertebral fracture quantification via anchor-free landmarks localization通过无锚地标定位可解释的椎骨骨折量化
errMEDICAL IMAGE ANALYSIS
IF11.8
err2023-01-01
err11
errOAAI
errZakharov, Alexey; Pisov, Maxim; Bukharaev, Alim; Petraikin, Alexey; Morozov, Sergey; Gombolevskiy, Victor; Belyaev, Mikhail
err分享
err收藏
Revealing β-TrCP activity dynamics in live cells with a genetically encoded biosensor
errNATURE COMMUNICATIONS
IF15.7
err2022-10-26
err12
errOAAI
errPaul, Debasish; Kales, Stephen C.; Cornwell, James A.; Afifi, Marwa M.; Rai, Ganesha; Zakharov, Alexey; Simeonov, Anton; Cappell, Steven D.
err分享
err收藏
A high-throughput screening platform for Polycystic Kidney Disease (PKD) drug repurposing utilizing murine and human ADPKD cells (vol 10, 4203, 2020)
errSCIENTIFIC REPORTS
IF3.9
err2022-10-13
err1
errOAAI
errAsawa, Rosita R.; Danchik, Carina; Zakharov, Alexey; Chen, Yuchi; Voss, Ty; Jadhav, Ajit; Wallace, Darren P.; Trott, Josephine F.; Weiss, Robert H.; Simeonov, Anton; Martinez, Natalia J.
err分享
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Artificial Immune Cell, AI-cell, a New Tool to Predict Interferon Production by Peripheral Blood Monocytes in Response to Nucleic Acid Nanoparticles
errSMALL
IF12.1
err2022-10-10
err14
errOAAI
errChandler, Morgan; Jain, Sankalp; Halman, Justin; Hong, Enping; Dobrovolskaia, Marina A.; Zakharov, Alexey, V; Afonin, Kirill A.
err分享
err收藏
Venglustat Inhibits Protein N-Terminal Methyltransferase 1 in a Substrate-Competitive Manner
errJOURNAL OF MEDICINAL CHEMISTRY
IF6.8
err2022-09-08
err4
errOAAI
errDong, Guangping; Deng, Youchao; Yasgar, Adam; Yadav, Ravi; Talley, Daniel; Zakharov, Alexey, V; Jain, Sankalp; Rai, Ganesha; Noinaj, Nicholas; Simeonov, Anton; Huang, Rong
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err收藏
A Comprehensive Phenotypic Screening Strategy to Identify Modulators of Cargo Translocation by the Bacterial Type IVB Secretion System
errMBIO
IF4.7
err2022-04-26
err6
errOAAI
errCheng, Eric; Dorjsuren, Dorjbal; Lehman, Stephanie; Larson, Charles L.; Titus, Steven A.; Sun, Hongmao; Zakharov, Alexey; Rai, Ganesha; Heinzen, Robert A.; Simeonov, Anton; Machner, Matthias P.
err分享
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CATMoS: Collaborative Acute Toxicity Modeling Suite (vol 129, 047013, 2021)CATMoS: 协作式急性毒性建模套件 (129卷，047013，2021)
errENVIRONMENTAL HEALTH PERSPECTIVES
IF9.8
err2021-10-01
err3
errOAAI
errMansouri, Kamel; Karmaus, Agnes L.; Fitzpatrick, Jeremy; Patlewicz, Grace; Pradeep, Prachi; Alberga, Domenico; Alepee, Nathalie; Allen, Timothy E. H.; Allen, Dave; Alves, Vinicius M.; Andrade, Carolina H.; Auernhammer, Tyler R.; Ballabio, Davide; Bell, Shannon; Benfenati, Emilio; Bhattacharya, Sudin; V. Bastos, Joyce; Boyd, Stephen; Brown, J. B.; Capuzzi, Stephen J.; Chushak, Yaroslav; Ciallella, Heather; Clark, Alex M.; Consonni, Viviana; Daga, Pankaj R.; Ekins, Sean; Farag, Sherif; Fedorov, Maxim; Fourches, Denis; Gadaleta, Domenico; Gao, Feng; Gearhart, Jeffery M.; Goh, Garett; Goodman, Jonathan M.; Grisoni, Francesca; Grulke, Christopher M.; Hartung, Thomas; Hirn, Matthew; Karpov, Pavel; Korotcov, Alexandru; Lavado, Giovanna J.; Lawless, Michael; Li, Xinhao; Luechtefeld, Thomas; Lunghini, Filippo; Mangiatordi, Giuseppe F.; Marcou, Gilles; Marsh, Dan; Martin, Todd; Mauri, Andrea; Muratov, Eugene N.; Myatt, Glenn J.; Nguyen, Dac-Trung; Nicolotti, Orazio; Note, Reine; Pande, Paritosh; Parks, Amanda K.; Peryea, Tyler; Polash, Ahsan H.; Rallo, Robert; Roncaglioni, Alessandra; Rowlands, Craig; Ruiz, Patricia; Russo, Daniel P.; Sayed, Ahmed; Sayre, Risa; Sheils, Timothy; Siegel, Charles; Silva, Arthur C.; Simeonov, Anton; Sosnin, Sergey; Southall, Noel; Strickland, Judy; Tang, Yun; Teppen, Brian; V. Tetko, Igor; Thomas, Dennis; Tkachenko, Valery; Todeschini, Roberto; Toma, Cosimo; Tripodi, Ignacio; Trisciuzzi, Daniela; Tropsha, Alexander; Varnek, Alexandre; Vukovic, Kristijan; Wang, Zhongyu; Wang, Liguo; Waters, Katrina M.; Wedlake, Andrew J.; Wijeyesakere, Sanjeeva J.; Wilson, Dan; Xiao, Zijun; Yang, Hongbin; Zahoranszky-Kohalmi, Gergely; V. Zakharov, Alexey; Zhang, Fagen F.; Zhang, Zhen; Zhao, Tongan; Zhu, Hao; Zorn, Kimberley M.; Casey, Warren; Kleinstreuer, Nicole C.
err分享
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The AKT modulator A-443654 reduces α-synuclein expression and normalizes ER stress and autophagy
errJOURNAL OF BIOLOGICAL CHEMISTRY
IF3.9
err2021-10-01
err13
errOAAI
errGandelman, Mandi; Dansithong, Warunee; Kales, Stephen C.; Paul, Sharan; Maag, Gentrie; Aoyama, Erika; Zakharov, Alexey; Rai, Ganesha; Dexheimer, Thomas; Whitehill, Brooke M.; Sun, Hongmao; Jadhav, Ajit; Simeonov, Anton; Henderson, Mark J.; Huynh, Duong P.; Pulst, Stefan M.; Scoles, Daniel R.
err分享
err收藏
Deep learning identifies synergistic drug combinations for treating COVID-19深度学习确定治疗新型冠状病毒肺炎的协同药物组合
errPROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
IF9.1
err2021-09-15
err92
errOAAI
errJin, Wengong; Stokes, Jonathan M.; Eastman, Richard T.; Itkin, Zina; Zakharov, Alexey, V; Collins, James J.; Jaakkola, Tommi S.; Barzilay, Regina
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