未登录Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history
Mazeas, Lisa; Bouguerba-Collin, Ahlem; Cock, J. Mark; Denoeud, France; Godfroy, Olivier; Brillet-Gueguen, Loraine; Barbeyron, Tristan; Lipinska, Agnieszka P.; Delage, Ludovic; Corre, Erwan; Drula, Elodie; Henrissat, Bernard; Czjzek, Mirjam; Terrapon, Nicolas; Herve, Cecile
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收藏LocoGSE, a sequence-based genome size estimator for plants (vol 15, 1328966, 2024)
Guenzi-Tiberi, Pierre; Istace, Benjamin; Alsos, Inger Greve; Coissac, Eric; Lavergne, Sebastien; Aury, Jean-Marc; Denoeud, France
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收藏Pervasive tandem duplications and convergent evolution shape coral genomes普遍的串联复制和收敛进化形状的珊瑚基因组
Noel, Benjamin; Denoeud, France; Rouan, Alice; Buitrago-Lopez, Carol; Capasso, Laura; Poulain, Julie; Boissin, Emilie; Pousse, Melanie; Da Silva, Corinne; Couloux, Arnaud; Armstrong, Eric; Carradec, Quentin; Cruaud, Corinne; Labadie, Karine; Le-Hoang, Julie; Tambutte, Sylvie; Barbe, Valerie; Moulin, Clementine; Bourdin, Guillaume; Iwankow, Guillaume; Romac, Sarah; Agostini, Sylvain; Banaigs, Bernard; Boss, Emmanuel; Bowler, Chris; de Vargas, Colomban; Douville, Eric; Flores, J. Michel; Forcioli, Didier; Furla, Paola; Galand, Pierre E.; Lombard, Fabien; Pesant, Stephane; Reynaud, Stephanie; Sullivan, Matthew B.; Sunagawa, Shinichi; Thomas, Olivier P.; Trouble, Romain; Thurber, Rebecca Vega; Allemand, Denis; Planes, Serge; Gilson, Eric; Zoccola, Didier; Wincker, Patrick; Voolstra, Christian R.; Aury, Jean-Marc
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收藏Postglacial species arrival and diversity buildup of northern ecosystems took millennia
Alsos, Inger Greve; Rijal, Dilli Prasad; Ehrich, Dorothee; Karger, Dirk Nikolaus; Yoccoz, Nigel Gilles; Heintzman, Peter D.; Brown, Antony G.; Lammers, Youri; Pellissier, Loic; Alm, Torbjorn; Brathen, Kari Anne; Coissac, Eric; Merkel, Marie Kristine Foreid; Alberti, Adriana; Denoeud, France; Bakke, Jostein
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收藏Tempo and drivers of plant diversification in the European mountain system欧洲山区系统中植物多样化的节奏和驱动因素
Smycka, Jan; Roquet, Cristina; Boleda, Marti; Alberti, Adriana; Boyer, Frederic; Douzet, Rolland; Perrier, Christophe; Rome, Maxime; Valay, Jean-Gabriel; Denoeud, France; Semberova, Kristyna; Zimmermann, Niklaus E.; Thuiller, Wilfried; Wincker, Patrick; Alsos, Inger G.; Coissac, Eric; Layergne, Sebastien
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收藏Long-read assembly of the Brassica napus reference genome Darmor-bzh
Rousseau-Gueutin, Mathieu; Belser, Caroline; Da Silva, Corinne; Richard, Gautier; Istace, Benjamin; Cruaud, Corinne; Falentin, Cyril; Boideau, Franz; Boutte, Julien; Delourme, Regine; Deniot, Gwenaelle; Engelen, Stefan; de Carvalho, Julie Ferreira; Lemainque, Arnaud; Maillet, Loeiz; Morice, Jerome; Wincker, Patrick; Denoeud, France; Chevre, Anne-Marie; Aury, Jean-Marc
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收藏The Treasure Vault Can be Opened: Large-Scale Genome Skimming Works Well Using Herbarium and Silica Gel Dried Material可以打开宝库: 使用植物标本室和硅胶干燥材料进行大规模基因组撇去效果很好
Alsos, Inger Greve; Lavergne, Sebastien; Merkel, Marie Kristine Foreid; Boleda, Marti; Lammers, Youri; Alberti, Adriana; Pouchon, Charles; Denoeud, France; Pitelkova, Iva; Puscas, Mihai; Roquet, Cristina; Hurdu, Bogdan-Iuliu; Thuiller, Wilfried; Zimmermann, Niklaus E.; Hollingsworth, Peter M.; Coissac, Eric
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收藏Cytonuclear interactions remain stable during allopolyploid evolution despite repeated whole-genome duplications in Brassica尽管芸苔属中重复的全基因组重复,但在异源多倍体进化过程中,细胞核相互作用仍保持稳定。
de Carvalho, Julie Ferreira; Lucas, Jeremy; Deniot, Gwenaelle; Falentin, Cyril; Filangi, Olivier; Gilet, Marie; Legeai, Fabrice; Lode, Maryse; Morice, Jerome; Trotoux, Gwenn; Aury, Jean-Marc; Barbe, Valerie; Keller, Jean; Snowdon, Rod; He, Zhesi; Denoeud, France; Wincker, Patrick; Bancroft, Ian; Chevre, Anne-Marie; Rousseau-Gueutin, Mathieu
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收藏Chromosome-scale assemblies of plant genomes using nanopore long reads and optical maps使用纳米孔长读段和光学图的植物基因组的染色体规模组装
Belser, Caroline; Istace, Benjamin; Denis, Erwan; Dubarry, Marion; Baurens, Franc-Christophe; Falentin, Cyril; Genete, Mathieu; Berrabah, Wahiba; Chevre, Anne-Marie; Delourme, Regine; Deniot, Gwenaelle; Denoeud, France; Duffe, Philippe; Engelen, Stefan; Lemainque, Arnaud; Manzanares-Dauleux, Maria; Martin, Guillaume; Morice, Jerome; Noel, Benjamin; Vekemans, Xavier; D'Hont, Angelique; Rousseau-Gueutin, Mathieu; Barbe, Valerie; Cruaud, Corinne; Wincker, Patrick; Aury, Jean-Marc
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收藏Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea
Parkin, Isobel A. P.; Koh, Chushin; Tang, Haibao; Robinson, Stephen J.; Kagale, Sateesh; Clarke, Wayne E.; Town, Chris D.; Nixon, John; Krishnakumar, Vivek; Bidwell, Shelby L.; Denoeud, France; Belcram, Harry; Links, Matthew G.; Just, Jeremy; Clarke, Carling; Bender, Tricia; Huebert, Terry; Mason, Annaliese S.; Pires, J. Chris; Barker, Guy; Moore, Jonathan; Walley, Peter G.; Manoli, Sahana; Batley, Jacqueline; Edwards, David; Nelson, Matthew N.; Wang, Xiyin; Paterson, Andrew H.; King, Graham; Bancroft, Ian; Chalhoub, Boulos; Sharpe, Andrew G.
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收藏The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes甘菊基因组揭示了多倍体基因组的不对称进化
Liu, Shengyi; Liu, Yumei; Yang, Xinhua; Tong, Chaobo; Edwards, David; Parkin, Isobel A. P.; Zhao, Meixia; Ma, Jianxin; Yu, Jingyin; Huang, Shunmou; Wang, Xiyin; Wang, Junyi; Lu, Kun; Fang, Zhiyuan; Bancroft, Ian; Yang, Tae-Jin; Hu, Qiong; Wang, Xinfa; Yue, Zhen; Li, Haojie; Yang, Linfeng; Wu, Jian; Zhou, Qing; Wang, Wanxin; King, Graham J.; Pires, J. Chris; Lu, Changxin; Wu, Zhangyan; Sampath, Perumal; Wang, Zhuo; Guo, Hui; Pan, Shengkai; Yang, Limei; Min, Jiumeng; Zhang, Dong; Jin, Dianchuan; Li, Wanshun; Belcram, Harry; Tu, Jinxing; Guan, Mei; Qi, Cunkou; Du, Dezhi; Li, Jiana; Jiang, Liangcai; Batley, Jacqueline; Sharpe, Andrew G.; Park, Beom-Seok; Ruperao, Pradeep; Cheng, Feng; Waminal, Nomar Espinosa; Huang, Yin; Dong, Caihua; Wang, Li; Li, Jingping; Hu, Zhiyong; Zhuang, Mu; Huang, Yi; Huang, Junyan; Shi, Jiaqin; Mei, Desheng; Liu, Jing; Lee, Tae-Ho; Wang, Jinpeng; Jin, Huizhe; Li, Zaiyun; Li, Xun; Zhang, Jiefu; Xiao, Lu; Zhou, Yongming; Liu, Zhongsong; Liu, Xuequn; Qin, Rui; Tang, Xu; Liu, Wenbin; Wang, Yupeng; Zhang, Yangyong; Lee, Jonghoon; Kim, Hyun Hee; Denoeud, France; Xu, Xun; Liang, Xinming; Hua, Wei; Wang, Xiaowu; Wang, Jun; Chalhoub, Boulos; Paterson, Andrew H.
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收藏The Streamlined Genome of Phytomonas spp. Relative to Human Pathogenic Kinetoplastids Reveals a Parasite Tailored for Plants植物单胞菌属的简化基因组。相对于人类致病性动质体,揭示了一种为植物量身定制的寄生虫
Porcel, Betina M.; Denoeud, France; Opperdoes, Fred; Noel, Benjamin; Madoui, Mohammed-Amine; Hammarton, Tansy C.; Field, Mark C.; Da Silva, Corinne; Couloux, Arnaud; Poulain, Julie; Katinka, Michael; Jabbari, Kamel; Aury, Jean-Marc; Campbell, David A.; Cintron, Roxana; Dickens, Nicholas J.; Docampo, Roberto; Sturm, Nancy R.; Koumandou, V. Lila; Fabre, Sandrine; Flegontov, Pavel; Lukes, Julius; Michaeli, Shulamit; Mottram, Jeremy C.; Szoeor, Balazs; Zilberstein, Dan; Bringaud, Frederic; Wincker, Patrick; Dollet, Michel
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收藏Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida红海藻Chondrus crispus的基因组结构和代谢特征揭示了古质体的进化
Collen, Jonas; Porcel, Betina; Carre, Wilfrid; Ball, Steven G.; Chaparro, Cristian; Tonon, Thierry; Barbeyron, Tristan; Michel, Gurvan; Noel, Benjamin; Valentin, Klaus; Elias, Marek; Artiguenave, Franois; Arun, Alok; Aury, Jean-Marc; Barbosa-Neto, Jose F.; Bothwell, John H.; Bouget, Franois-Yves; Brillet, Loraine; Cabello-Hurtado, Francisco; Capella-Gutierrez, Salvador; Charrier, Benedicte; Cladiere, Lionel; Cock, J. Mark; Coelho, Susana M.; Colleoni, Christophe; Czjzek, Mirjam; Da Silva, Corinne; Delage, Ludovic; Denoeud, France; Deschamps, Philippe; Dittami, Simon M.; Gabaldon, Toni; Gachon, Claire M. M.; Groisillier, Agnes; Herve, Cecile; Jabbari, Kamel; Katinka, Michael; Kloareg, Bernard; Kowalczyk, Nathalie; Labadie, Karine; Leblanc, Catherine; Lopez, Pascal J.; McLachlan, Deirdre H.; Meslet-Cladiere, Laurence; Moustafa, Ahmed; Nehr, Zofia; Collen, Pi Nyvall; Panaud, Olivier; Partensky, Frederic; Poulain, Julie; Rensing, Stefan A.; Rousvoal, Sylvie; Samson, Gaelle; Symeonidi, Aikaterini; Weissenbach, Jean; Zambounis, Antonios; Wincker, Patrick; Boyen, Catherine
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收藏Conservation and divergence of chemical defense system in the tunicate Oikopleura dioica revealed by genome wide response to two xenobiotics
Yadetie, Fekadu; Butcher, Stephen; Forde, Hilde E.; Campsteijn, Coen; Bouquet, Jean-Marie; Karlsen, Odd A.; Denoeud, France; Metpally, Raghu; Thompson, Eric M.; Manak, J. Robert; Goksoyr, Anders; Chourrout, Daniel
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收藏Genome sequence of the stramenopile Blastocystis, a human anaerobic parasite
Denoeud, France; Roussel, Michael; Noel, Benjamin; Wawrzyniak, Ivan; Da Silva, Corinne; Diogon, Marie; Viscogliosi, Eric; Brochier-Armanet, Celine; Couloux, Arnaud; Poulain, Julie; Segurens, Beatrice; Anthouard, Veronique; Texier, Catherine; Blot, Nicolas; Poirier, Philippe; Ng, Geok Choo; Tan, Kevin S. W.; Artiguenave, Francois; Jaillon, Olivier; Aury, Jean-Marc; Delbac, Frederic; Wincker, Patrick; Vivares, Christian P.; El Alaoui, Hicham
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收藏Variation in Novel Exons (RACEfrags) of the MECP2 Gene in Rett Syndrome Patients and Controls
Makrythanasis, Periklis; Kapranov, Philipp; Bartoloni, Lucia; Reymond, Alexandre; Deutsch, Samuel; Guigo, Roderic; Denoeud, France; Drenkow, Jorg; Rossier, Colette; Ariani, Francesca; Capra, Valeria; Excoffier, Laurent; Renieri, Alessandra; Gingeras, Thomas R.; Antonarakis, Stylianos E.
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收藏Annotating genomes with massive-scale RNA sequencing
Denoeud, France; Aury, Jean-Marc; Da Silva, Corinne; Noel, Benjamin; Rogier, Odile; Delledonne, Massimo; Morgante, Michele; Valle, Giorgio; Wincker, Patrick; Scarpelli, Claude; Jaillon, Olivier; Artiguenave, Francois
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收藏Efficient targeted transcript discovery via array-based normalization of RACE libraries
Djebali, Sarah; Kapranov, Philipp; Foissac, Sylvain; Lagarde, Julien; Reymond, Alexandre; Ucla, Catherine; Wyss, Carine; Drenkow, Jorg; Dumais, Erica; Murray, Ryan R.; Lin, Chenwei; Szeto, David; Denoeud, France; Calvo, Miquel; Frankish, Adam; Harrow, Jennifer; Makrythanasis, Periklis; Vidal, Marc; Salehi-Ashtiani, Kourosh; Antonarakis, Stylianos E.; Gingeras, Thomas R.; Guigo, Roderic
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