Michael E. Papka - Publications, H-index & Citations

Michael E. Papka

Northern Illinois University

32H指数

324论文数

4.5K被引数

收录论文 18

发表时间

GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics

INTERNATIONAL JOURNAL OF HIGH PERFORMANCE COMPUTING APPLICATIONS

IF2.5

2023-10-27

OAAI

Zvyagin, Maxim; Brace, Alexander; Hippe, Kyle; Deng, Yuntian; Zhang, Bin; Bohorquez, Cindy Orozco; Clyde, Austin; Kale, Bharat; Perez-Rivera, Danilo; Ma, Heng; Mann, Carla M.; Irvin, Michael; Ozgulbas, Defne G.; Vassilieva, Natalia; Pauloski, James Gregory; Ward, Logan; Hayot-Sasson, Valerie; Emani, Murali; Foreman, Sam; Xie, Zhen; Lin, Diangen; Shukla, Maulik; Nie, Weili; Romero, Josh; Dallago, Christian; Vahdat, Arash; Xiao, Chaowei; Gibbs, Thomas; Foster, Ian; Davis, James J.; Papka, Michael E.; Brettin, Thomas; Stevens, Rick; Anandkumar, Anima; Vishwanath, Venkatram; Ramanathan, Arvind

Leveraging national laboratories to increase Black representation in STEM: recommendations within the Department of Energy

INTERNATIONAL JOURNAL OF STEM EDUCATION

IF8

2023-01-18

OAAI

Hampton-Marcell, Jarrad; Bryson, Tasia; Larson, Jeffrey; Childers, Taylor; Pasero, Spencer; Watkins, Cortez; Reed, Thomas; Flucas-Payton, Dorletta; Papka, Michael E.

DRAS: Deep Reinforcement Learning for Cluster Scheduling in High Performance Computing

IEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS

IF6

2022-12-01

OAAI

Fan, Yuping; Li, Boyang; Favorite, Dustin; Singh, Naunidh; Childers, Taylor; Rich, Paul; Allcock, William; Papka, Michael E.; Lan, Zhiling

Linking scientific instruments and computation: Patterns, technologies, and experiences

PATTERNS

IF7.4

2022-10-01

OAAI

Vescovi, Rafael; Chard, Ryan; Saint, Nickolaus D.; Blaiszik, Ben; Pruyne, Jim; Bicer, Tekin; Lavens, Alex; Liu, Zhengchun; Papka, Michael E.; Narayanan, Suresh; Schwarz, Nicholas; Chard, Kyle; Foster, Ian T.

viewSq, a Visual Molecular Dynamics (VMD) module for calculating, analyzing, and visualizing X-ray and neutron structure factors from atomistic simulations (vol 264, 107881, 2021)

COMPUTER PHYSICS COMMUNICATIONS

IF3.4

2022-07-01

OAAI

Mackoy, Travis; Kale, Bharat; Papka, Michael E.; Wheeler, Ralph A.

viewSq, a Visual Molecular Dynamics (VMD) module for calculating, analyzing, and visualizing X-ray and neutron structure factors from atomistic simulations

COMPUTER PHYSICS COMMUNICATIONS

IF3.4

2021-07-01

OAAI

Mackoy, Travis; Kale, Bharat; Papka, Michael E.; Wheeler, Ralph A.

Parallel streaming between heterogeneous HPC resources for real-time analysis

nature computational science

IF3.7

2019-02-01

OAAI

Marrinan, Thomas; Eisenhauer, Greg; Wolf, Matthew; Insley, Joseph A.; Rizzi, Silvio; Papka, Michael E.

Scalable pCT Image Reconstruction Delivered as a Cloud Service

IEEE TRANSACTIONS ON CLOUD COMPUTING

IF5

2018-01-01

OAAI

Chard, Ryan; Madduri, Ravi; Karonis, Nicholas T.; Chard, Kyle; Duffin, Kirk L.; Ordonez, Caesar E.; Uram, Thomas D.; Fleischauer, Justin; Foster, Ian T.; Papka, Michael E.; Winans, John

Adapting the serial Alpgen parton-interaction generator to simulate LHC collisions on millions of parallel threads

COMPUTER PHYSICS COMMUNICATIONS

IF3.4

2017-01-01

OAAI

Childers, J. T.; Uram, T. D.; LeCompte, T. J.; Papka, M. E.; Benjamin, D. P.

Interstitial and Interlayer Ion Diffusion Geometry Extraction in Graphitic Nanosphere Battery Materials

IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS

IF6.5

2016-01-31

PREAI

Gyulassy, Attila; Knoll, Aaron; Lau, Kah Chun; Wang, Bei; Bremer, Peer-Timo; Papka, Michael E.; Curtiss, Larry A.; Pascucci, Valerio

Quantitative modeling of power performance tradeoffs on extreme scale systems

JOURNAL OF PARALLEL AND DISTRIBUTED COMPUTING

IF4

2015-10-01

OAAI

Yu, Li; Zhou, Zhou; Wallace, Sean; Papka, Michael E.; Lan, Zhiling

DIRAQ: scalable in situ data- and resource-aware indexing for optimized query performance

CLUSTER COMPUTING-THE JOURNAL OF NETWORKS SOFTWARE TOOLS AND APPLICATIONS

IF4.1

2014-03-12

PREAI

Lakshminarasimhan, Sriram; Zou, Xiaocheng; Boyuka, David A., II; Pendse, Saurabh V.; Jenkins, John; Vishwanath, Venkatram; Papka, Michael E.; Klasky, Scott; Samatova, Nagiza F.

Distributed and hardware accelerated computing for clinical medical imaging using proton computed tomography (pCT)使用质子计算机断层扫描 (pCT) 进行临床医学成像的分布式和硬件加速计算

JOURNAL OF PARALLEL AND DISTRIBUTED COMPUTING

IF4

2013-12-01

PREAI

Karonis, Nicholas T.; Duffin, Kirk L.; Ordonez, Caesar E.; Erdelyi, Bela; Uram, Thomas D.; Olson, Eric C.; Coutrakon, George; Papka, Michael E.

The International Exascale Software Project roadmap 国际Exascale软件项目路线图

INTERNATIONAL JOURNAL OF HIGH PERFORMANCE COMPUTING APPLICATIONS

IF2.5

2011-01-06

395

OAAI

Dongarra, Jack; Beckman, Pete; Moore, Terry; Aerts, Patrick; Aloisio, Giovanni; Andre, Jean-Claude; Barkai, David; Berthou, Jean-Yves; Boku, Taisuke; Braunschweig, Bertrand; Cappello, Franck; Chapman, Barbara; Chi, Xuebin; Choudhary, Alok; Dosanjh, Sudip; Dunning, Thom; Fiore, Sandro; Geist, Al; Gropp, Bill; Harrison, Robert; Hereld, Mark; Heroux, Michael; Hoisie, Adolfy; Hotta, Koh; Jin, Zhong; Ishikawa, Yutaka; Johnson, Fred; Kale, Sanjay; Kenway, Richard; Keyes, David; Kramer, Bill; Labarta, Jesus; Lichnewsky, Alain; Lippert, Thomas; Lucas, Bob; Maccabe, Barney; Matsuoka, Satoshi; Messina, Paul; Michielse, Peter; Mohr, Bernd; Mueller, Matthias S.; Nagel, Wolfgang E.; Nakashima, Hiroshi; Papka, Michael E.; Reed, Dan; Sato, Mitsuhisa; Seidel, Ed; Shalf, John; Skinner, David; Snir, Marc; Sterling, Thomas; Stevens, Rick; Streitz, Fred; Sugar, Bob; Sumimoto, Shinji; Tang, William; Taylor, John; Thakur, Rajeev; Trefethen, Anne; Valero, Mateo; van der Steen, Aad; Vetter, Jeffrey; Williams, Peg; Wisniewski, Robert; Yelick, Kathy

Grid support for collaborative control room in fusion science

CLUSTER COMPUTING-THE JOURNAL OF NETWORKS SOFTWARE TOOLS AND APPLICATIONS

IF4.1

2005-10-01

PREAI

Keahey, K; Papka, ME; Peng, Q; Schissel, D; Abla, G; Araki, T; Burruss, J; Feibush, E; Lane, P; Klasky, S; Leggett, T; McCune, D; Randerson, L

Simulation of neocortical epileptiform activity using parallel computing

NEUROCOMPUTING

IF6.5

2004-06-01

PREAI

van Drongelen, W; Lee, HC; Hereld, M; Jones, D; Cohoon, M; Elsen, F; Papka, ME; Stevens, RL