Heber L. Rocha - Publications, H-index & Citations

Heber L. Rocha

University of Maryland Baltimore

9H指数

32论文数

336被引数

收录论文 10

发表时间

BIWT: a bioinformatics walkthrough for embedding spatial multiomics in agent-based models for virtual cells

BIOINFORMATICS

IF5.4

2025-11-01

OAAI

Bergman, Daniel R.; Johnson, Jeanette A. I.; Naji, Marwa; Booth, Max; da Rocha, Heber Lima; Deshpande, Atul; Sidiropoulos, Dimitrios N.; Lopez-Vidal, Tamara; Heiland, Randy; Kagohara, Luciane T.; Anders, Robert A.; Zheng, Lei; Jaffee, Elizabeth M.; Stein-O'brien, Genevieve; Macklin, Paul; Fertig, Elana J.

Drug-loaded nanoparticles for cancer therapy: A high-throughput multicellular agent-based modeling study 用于癌症治疗的载药纳米颗粒：一项高通量多细胞代理模型研究

JOURNAL OF THEORETICAL BIOLOGY

IF2

2025-09-01

OAAI

Wang, Yafei; Metzcar, John; Bucher, Elmar; Rocha, Heber L.; Jadhao, Vikram; Heiland, Randy; Frieboes, Hermann B.; Macklin, Paul

Human interpretable grammar encodes multicellular systems biology models to democratize virtual cell laboratories 人类可解释的语法对多细胞系统生物学模型进行编码，以实现虚拟细胞实验室的民主化。

Cell

IF42.5

2025-07-26

OAAI

Jeanette A.I. Johnson; Daniel R. Bergman; Heber L. Rocha; David L. Zhou; Eric Cramer; Ian C. Mclean; Yoseph W. Dance; Max Booth; Zachary Nicholas; Tamara Lopez-Vidal; Atul Deshpande; Randy Heiland; Elmar Bucher; Fatemeh Shojaeian; Matthew Dunworth; André Forjaz; Michael Getz; Inês Godet; Furkan Kurtoglu; Melissa Lyman; John Metzcar; Jacob T. Mitchell; Andrew Raddatz; Jacobo Solorzano; Aneequa Sundus; Yafei Wang; David G. DeNardo; Andrew J. Ewald; Daniele M. Gilkes; Luciane T. Kagohara; Ashley L. Kiemen; Elizabeth D. Thompson; Denis Wirtz; Laura D. Wood; Pei-Hsun Wu; Neeha Zaidi; Lei Zheng; Jacquelyn W. Zimmerman; Jude M. Phillip; Elizabeth M. Jaffee; Joe W. Gray; Lisa M. Coussens; Young Hwan Chang; Laura M. Heiser; Genevieve L. Stein-O’Brien; Elana J. Fertig; Paul Macklin

Connecting Different Approaches for Cell Cycle Modeling: Learning Ordinary Differential Equations from Individual-Based Models 连接不同方法进行细胞周期建模：从个体基模型中学习常微分方程

ieee acm transactions on computational biology and bioinformatics

IF0

2025-07-01

OAAI

Gustavo T. Naozuka; Heber L. Rocha; Thiago J. Pereira; Gustavo B. Libotte; Regina C. Almeida

A multiscale model of immune surveillance in micrometastases gives insights on cancer patient digital twins

NPJ SYSTEMS BIOLOGY AND APPLICATIONS

IF3.5

2024-12-04

OAAI

L. Rocha, Heber; Aguilar, Boris; Getz, Michael; Shmulevich, Ilya; Macklin, Paul

Reprint of: Bayesian inference using Gaussian process surrogates in cancer modeling

COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING

IF7.3

2022-12-01

PREAI

Rocha, Heber L.; Silva, Joao Vitor de O.; Silva, Renato S.; Lima, Ernesto A. B. F.; Almeida, Regina C.

Exploring approaches for predictive cancer patient digital twins: Opportunities for collaboration and innovation 探索预测性癌症患者数字双胞胎的方法: 合作与创新的机会

FRONTIERS IN DIGITAL HEALTH

IF3.8

2022-10-06

OAAI

Stahlberg, Eric A. A.; Abdel-Rahman, Mohamed; Aguilar, Boris; Asadpoure, Alireza; Beckman, Robert A. A.; Borkon, Lynn L. L.; Bryan, Jeffrey N. N.; Cebulla, Colleen M. M.; Chang, Young Hwan; Chatterjee, Ansu; Deng, Jun; Dolatshahi, Sepideh; Gevaert, Olivier; Greenspan, Emily J. J.; Hao, Wenrui; Hernandez-Boussard, Tina; Jackson, Pamela R. R.; Kuijjer, Marieke; Lee, Adrian; Macklin, Paul; Madhavan, Subha; McCoy, Matthew D. D.; Mirzaei, Navid Mohammad; Razzaghi, Talayeh; Rocha, Heber L. L.; Shahriyari, Leili; Shmulevich, Ilya; Stover, Daniel G. G.; Sun, Yi; Syeda-Mahmood, Tanveer; Wang, Jinhua; Wang, Qi; Zervantonakis, Ioannis

Bayesian inference using Gaussian process surrogates in cancer modeling

COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING

IF7.3

2022-09-01

PREAI

Rocha, Heber L.; Silva, Joao Vitor de O.; Silva, Renato S.; Lima, Ernesto A. B. F.; Almeida, Regina C.

SINDy-SA framework: enhancing nonlinear system identification with sensitivity analysis

NONLINEAR DYNAMICS

IF6

2022-08-30

OAAI

Naozuka, Gustavo T.; Rocha, Heber L.; Silva, Renato S.; Almeida, Regina C.